Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is yjjI [H]

Identifier: 78044689

GI number: 78044689

Start: 775237

End: 776772

Strand: Direct

Name: yjjI [H]

Synonym: CHY_0876

Alternate gene names: 78044689

Gene position: 775237-776772 (Clockwise)

Preceding gene: 78043792

Following gene: 78044002

Centisome position: 32.28

GC content: 42.77

Gene sequence:

>1536_bases
ATGAAGTTAGAAACTTTAAGTCGGGTGATAAGAGCGATGAACCGGGTTTATGAAATAATTACCGATACTTCTTTGGATTA
CAAAGATAAGCGGCACTTACTGGCGGCGGAGGCGGAAAACTCCCTTCCTTATGTAAAAATTAGTGAAAAGGCTCAGCAGT
ACTTTTCCCAGGGAATCTTATGTGATCTTTTTGAAGGTCACGCTCCCTACCGGCCGCGTTATATTTTGCCGGATTACCAA
AAATTTATGGAAAAGGGAAGCGAGTACTTAAATTTAAAACCCCCGCAGGATTTATTTGAAGCGGTTAATGCCCTTTTAAT
TATCTATCGCTACGTTCCTTCCATAACGAGCTATCCCGTATATCTGGGACAGGTAGATGAGCATTTAGAACCGTTTGTTT
TGGCTGCCGGCGAGGAACTTTCCGAAAAACTCTTAAAAATGTTTTTGGTGCAAATAGACCGGGTGTTACCCGATGGGTTT
GTCCACATGAACATTGGGCCCAAAGATACCCGTACCGGACGATTAATTTTGAAGCTGGAGCGGGAGCTTAAGCAGGCAGT
ACCCAACATTTCCTTAAAATATAATGAAGAAACTCCTGATAGTTTTGCCATAGAGGCGGTTAAAACGGCATTGGAAATTG
GAAAACCGTATTTTGTCAACGACCGGGAATTAAAAGAAGACCTTGACCCTGCTTACGGAGTTGCCAGCTGCTATAATACT
TTATTAATTGGTGGAGGCAGCTTTACTTTAGTTCGGTTAAATTTAAAAGAAGCTGCCAAAAAAGCGAGGGATTTTCAGGA
CTTTATCCGGAATGTTTTACCTGATGCAGTGTTGGCGCAGGCCGAGGTTATCAATGCCCGGGCTAAATTTATCGTAGAAG
AAGCGAAATTTTTTGAAACTTCCTTTTTAGCTAAAGAAGGTTTAATTTCCCTTGCCCGCTTTACCTCCATGGCCGGATAT
TTTGGACTGTACGAATGTATTGAACACTTAACGGGACTGAAGCTTGGTAAGGATAAAGAAGCCCTTTACTATGCCGAACA
AGTGTTAAAAACCGCCAAAGATACTTTAGAAAGTGTCCCGGGAGCTTACTGCTACGGTACCGGCGGCAGGATAGGTTTTC
ATGCCCAGTCGGGGATTGACAGCGACATCGATGTAACGCCCGGGGTGCGGATAAAATACGGCGAGGAGCCGGACATTTTT
ACCCAGATTAAAACCGAGGGAAGGCTCCATAAATACTTTGATACAGGCATTAGTGATATTTACATCTTTGACCGGACCGC
CCGGGAAAATCCGGAAGGGGTTTTAAAAATAATCAAGGGGGCTTTAAAAGAGGGAATCAGAGTATTTTCTTTCAACACTT
CCGATTCGGAATTTATCCGGATTACCGGTTACCTTGTAAAAAGAACCGATGTTTTAAAATACGAAAAAGGCGAGGTTTTA
CGGGAAGATACGGTAAAGCTTGGAGCAGCAAGCATTAAAAACAACAATACCGAAGCCAGAAAGGTAAGGATAATCGGTGA
GAGGAATAGTCAATAA

Upstream 100 bases:

>100_bases
GATAAAATCCAGGCATTGAAAAAGGTAAGGGAGGAAGTAGAGAAATTTTACCTTAAAAGTAAATAAAGATTTTGCTACAA
GCGGTAAAAAGGGTGGTATA

Downstream 100 bases:

>100_bases
AATTATTGAGGTAAGCTTTATCGACGGTCCCGGAACCCGGATGGCAATCTTTCTCCAGGGTTGTAATCTTGACTGCCTGT
ACTGTCACAACCCGGAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGILCDLFEGHAPYRPRYILPDYQ
KFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPVYLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGF
VHMNIGPKDTRTGRLILKLERELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT
LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFETSFLAKEGLISLARFTSMAGY
FGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVPGAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIF
TQIKTEGRLHKYFDTGISDIYIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL
REDTVKLGAASIKNNNTEARKVRIIGERNSQ

Sequences:

>Translated_511_residues
MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGILCDLFEGHAPYRPRYILPDYQ
KFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPVYLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGF
VHMNIGPKDTRTGRLILKLERELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT
LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFETSFLAKEGLISLARFTSMAGY
FGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVPGAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIF
TQIKTEGRLHKYFDTGISDIYIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL
REDTVKLGAASIKNNNTEARKVRIIGERNSQ
>Mature_511_residues
MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGILCDLFEGHAPYRPRYILPDYQ
KFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPVYLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGF
VHMNIGPKDTRTGRLILKLERELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT
LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFETSFLAKEGLISLARFTSMAGY
FGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVPGAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIF
TQIKTEGRLHKYFDTGISDIYIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL
REDTVKLGAASIKNNNTEARKVRIIGERNSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0521 [H]

Homologues:

Organism=Escherichia coli, GI1790840, Length=504, Percent_Identity=40.6746031746032, Blast_Score=403, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016905 [H]

Pfam domain/function: PF11230 DUF3029 [H]

EC number: NA

Molecular weight: Translated: 57845; Mature: 57845

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGIL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCEEEEHHHHHHHHHCCCE
CDLFEGHAPYRPRYILPDYQKFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPV
EEHHCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
YLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGFVHMNIGPKDTRTGRLILKLE
EECCHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
RELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCHHHHHHHHHHH
LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFET
HEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLAKEGLISLARFTSMAGYFGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIFTQIKTEGRLHKYFDTGISDI
CCEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCHHHHHHCCCCEE
YIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL
EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEEEHHHHHEECCCCHH
REDTVKLGAASIKNNNTEARKVRIIGERNSQ
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MKLETLSRVIRAMNRVYEIITDTSLDYKDKRHLLAAEAENSLPYVKISEKAQQYFSQGIL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCEEEEHHHHHHHHHCCCE
CDLFEGHAPYRPRYILPDYQKFMEKGSEYLNLKPPQDLFEAVNALLIIYRYVPSITSYPV
EEHHCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
YLGQVDEHLEPFVLAAGEELSEKLLKMFLVQIDRVLPDGFVHMNIGPKDTRTGRLILKLE
EECCHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
RELKQAVPNISLKYNEETPDSFAIEAVKTALEIGKPYFVNDRELKEDLDPAYGVASCYNT
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCHHHHHHHHHHH
LLIGGGSFTLVRLNLKEAAKKARDFQDFIRNVLPDAVLAQAEVINARAKFIVEEAKFFET
HEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLAKEGLISLARFTSMAGYFGLYECIEHLTGLKLGKDKEALYYAEQVLKTAKDTLESVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GAYCYGTGGRIGFHAQSGIDSDIDVTPGVRIKYGEEPDIFTQIKTEGRLHKYFDTGISDI
CCEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCHHHHHHCCCCEE
YIFDRTARENPEGVLKIIKGALKEGIRVFSFNTSDSEFIRITGYLVKRTDVLKYEKGEVL
EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEEEHHHHHEECCCCHH
REDTVKLGAASIKNNNTEARKVRIIGERNSQ
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3019678 [H]