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The map label for this gene is cooSIV [H]

Identifier: 78044052

GI number: 78044052

Start: 649737

End: 651638

Strand: Direct

Name: cooSIV [H]

Synonym: CHY_0736

Alternate gene names: 78044052

Gene position: 649737-651638 (Clockwise)

Preceding gene: 78044076

Following gene: 78043443

Centisome position: 27.06

GC content: 47.42

Gene sequence:

>1902_bases
ATGGATAAAAGCAAATTATCGGTAGACCCGGTAATTCCCAATCTTTATCGGAAAGCCCGGGAAGAAGGGATTTCCACCGT
TTTTGACCGGTATGAAGCGCAGCAGCCTCAGTGCGGTTTTGGCTTAACAGGCCTTTGCTGTCGTCACTGCGTCCAGGGAC
CGTGCCGGATCGACCCCTTTGGGGAAGGACCGCAAGCGGGAATTTGCGGGGCAACGGCCGAAGTAATAACGGCAAGAAAT
CTACTGCGTCAGGTAACTGCCGGTGCTGCCGCTCATGTGGACCATGCCTATGATGTTCTGGAAGTTTTGGAACAAATTGC
CCAAGGTACGGAAAGCTACAGTATTAAGGATCAGGAAAAATTAAAGCAGGTAGCTTTTACCTTAGGTATAGATACAGCTA
ATAAAACAGAGCAGGAAATTGTTGAAGAAATGTGCCAAATTATCTACCGGGATTTTGCCAATTCCGGCGCAACTCCCATG
ACCTACCTGAAAGCCAATTCTCCGCGGGAGCGCCTCGAAACCTGGGAAAAGTTAGGAGTACTGCCGCGAAACCCGGACAG
GGAAATTAGAGAAGCTCTGCACCAGACTACAATGGGGATGGATGCGGACCCGGTAAATTTAATCTTAAAGACTATCCGGC
TTGGTCTGGTGGATGGTTTTGCGGGACTCAAGCTGGCCACGGACTTACAGGACATAATATTTGGAACTCCCCAGCCGGTG
GTAACAGAAGCCAACCTGGGTGTACTTAAAGAAGACTACGTCAATATCATTGTCCATGGCCACGTACCTTTGCTTTCGGA
AAAAATTGTTGAGTGGAGCAGAAAATTGGAAGATGAGGCGAAAAAGGCAGGGGCAAAAGGAATCAATCTTGCCGGGATAT
GTTGTACCGGTAATGAAGTGTTAATGCGGCAAGGGGTTCCTCTGGCGACTAACTTCCTGGCCCAGGAATTGGCGATTATT
ACCGGCGCTGTGGATTTAATGGTAGTGGATGTTCAGTGCATTATGCCGTCTTTAGCGGAAATTGCTGCTTGCTACCATAC
CCGCCTGGTCACTACCATGCCTATTGTCAAAATTCCCGGAGCGGAACACGTACCTTTTACCACCGAAACTGCCGATGAAG
CCTCCCAGCAGATTGTCCGGATGGCTATTGAAAGTTACCAAAAAAGAAATCCAGCCAAGGTCTATATTCCCAGGGAAAAA
GCCAAAGTAGTAGCAGGATTTAGCGTGGAAGCAATAGTAAAAGCTTTAGCGAAACTAAATCCTGATGACCCGTTAAAGCC
CTTAATTGACAATATTGTTTCTGGCAATATTCTGGGGGTAGTGGCTACCGTAGGTTGTAATAACGTCAAAGTAAAACACG
ATTGGTTTCATATAGAACTGGTAAAAGAATTAATTAAAAACAACGTTTTAGTAGTTACTACCGGCTGTTCCGCTCATGCC
TTAGCCAAAGCAGGATTGATGGATCCCGCAGCAGCCGAATGGGCTGGCGAAGGGTTAAGAGCTGTCTTAACGGCAATAGG
TACGGCCAATGATTTGGGAGGACCGCTGCCTCCGGTTTTGCACATGGGAAGCTGTGTGGATAATTCCCGAATCGGGGATT
TAGTCATAGCCGTAGCCAATTACCTTAAAGTTAGTCCCAAAGACCTGCCAATTGCTGCTTCTGCCCCGGAATACCAGCAT
GAAAAAGCTTTGAGCATTGGAACCTGGGCGGTGGCGATGGGAATAATGACCCACCTGGGAGTTGTTCCACCGGTTGTTGG
AAGTTCCAAAGTTACCCGGATTTTAACCCAGGACGCCGAAGCTTTAATTGGCGGTAAGTTTTACGTGGAAACGGATCCTT
ATAAAGCAGCAGCCGGTATTATTGAACATATTAAAGCTAAACGGGCTTTGTTAAACCTTTAG

Upstream 100 bases:

>100_bases
GCCTGTCCCACCAAAGCCCTGTCCTTTGCAGAAGTTCCCGTTTATGCCAAAAAGGAACGAAAGAAATACTTAACAAATTT
TTTGATGAAGGAGTGATTTT

Downstream 100 bases:

>100_bases
GGGGTTAACCTTAATGAAATACTTAATTATTGGAAACAGTGCTGCAGGAATTTTTGCGGCAGAAAGTTTAAGAAAGTTGG
ACCCAGCGGGCGAAATCACC

Product: carbon-monoxide dehydrogenase catalytic subunit

Products: NA

Alternate protein names: CODH 2 [H]

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MDKSKLSVDPVIPNLYRKAREEGISTVFDRYEAQQPQCGFGLTGLCCRHCVQGPCRIDPFGEGPQAGICGATAEVITARN
LLRQVTAGAAAHVDHAYDVLEVLEQIAQGTESYSIKDQEKLKQVAFTLGIDTANKTEQEIVEEMCQIIYRDFANSGATPM
TYLKANSPRERLETWEKLGVLPRNPDREIREALHQTTMGMDADPVNLILKTIRLGLVDGFAGLKLATDLQDIIFGTPQPV
VTEANLGVLKEDYVNIIVHGHVPLLSEKIVEWSRKLEDEAKKAGAKGINLAGICCTGNEVLMRQGVPLATNFLAQELAII
TGAVDLMVVDVQCIMPSLAEIAACYHTRLVTTMPIVKIPGAEHVPFTTETADEASQQIVRMAIESYQKRNPAKVYIPREK
AKVVAGFSVEAIVKALAKLNPDDPLKPLIDNIVSGNILGVVATVGCNNVKVKHDWFHIELVKELIKNNVLVVTTGCSAHA
LAKAGLMDPAAAEWAGEGLRAVLTAIGTANDLGGPLPPVLHMGSCVDNSRIGDLVIAVANYLKVSPKDLPIAASAPEYQH
EKALSIGTWAVAMGIMTHLGVVPPVVGSSKVTRILTQDAEALIGGKFYVETDPYKAAAGIIEHIKAKRALLNL

Sequences:

>Translated_633_residues
MDKSKLSVDPVIPNLYRKAREEGISTVFDRYEAQQPQCGFGLTGLCCRHCVQGPCRIDPFGEGPQAGICGATAEVITARN
LLRQVTAGAAAHVDHAYDVLEVLEQIAQGTESYSIKDQEKLKQVAFTLGIDTANKTEQEIVEEMCQIIYRDFANSGATPM
TYLKANSPRERLETWEKLGVLPRNPDREIREALHQTTMGMDADPVNLILKTIRLGLVDGFAGLKLATDLQDIIFGTPQPV
VTEANLGVLKEDYVNIIVHGHVPLLSEKIVEWSRKLEDEAKKAGAKGINLAGICCTGNEVLMRQGVPLATNFLAQELAII
TGAVDLMVVDVQCIMPSLAEIAACYHTRLVTTMPIVKIPGAEHVPFTTETADEASQQIVRMAIESYQKRNPAKVYIPREK
AKVVAGFSVEAIVKALAKLNPDDPLKPLIDNIVSGNILGVVATVGCNNVKVKHDWFHIELVKELIKNNVLVVTTGCSAHA
LAKAGLMDPAAAEWAGEGLRAVLTAIGTANDLGGPLPPVLHMGSCVDNSRIGDLVIAVANYLKVSPKDLPIAASAPEYQH
EKALSIGTWAVAMGIMTHLGVVPPVVGSSKVTRILTQDAEALIGGKFYVETDPYKAAAGIIEHIKAKRALLNL
>Mature_633_residues
MDKSKLSVDPVIPNLYRKAREEGISTVFDRYEAQQPQCGFGLTGLCCRHCVQGPCRIDPFGEGPQAGICGATAEVITARN
LLRQVTAGAAAHVDHAYDVLEVLEQIAQGTESYSIKDQEKLKQVAFTLGIDTANKTEQEIVEEMCQIIYRDFANSGATPM
TYLKANSPRERLETWEKLGVLPRNPDREIREALHQTTMGMDADPVNLILKTIRLGLVDGFAGLKLATDLQDIIFGTPQPV
VTEANLGVLKEDYVNIIVHGHVPLLSEKIVEWSRKLEDEAKKAGAKGINLAGICCTGNEVLMRQGVPLATNFLAQELAII
TGAVDLMVVDVQCIMPSLAEIAACYHTRLVTTMPIVKIPGAEHVPFTTETADEASQQIVRMAIESYQKRNPAKVYIPREK
AKVVAGFSVEAIVKALAKLNPDDPLKPLIDNIVSGNILGVVATVGCNNVKVKHDWFHIELVKELIKNNVLVVTTGCSAHA
LAKAGLMDPAAAEWAGEGLRAVLTAIGTANDLGGPLPPVLHMGSCVDNSRIGDLVIAVANYLKVSPKDLPIAASAPEYQH
EKALSIGTWAVAMGIMTHLGVVPPVVGSSKVTRILTQDAEALIGGKFYVETDPYKAAAGIIEHIKAKRALLNL

Specific function: CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH) [H]

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Note=Loosely attached to the inner membrane, probably via CooF [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 68263; Mature: 68263

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSKLSVDPVIPNLYRKAREEGISTVFDRYEAQQPQCGFGLTGLCCRHCVQGPCRIDPF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
GEGPQAGICGATAEVITARNLLRQVTAGAAAHVDHAYDVLEVLEQIAQGTESYSIKDQEK
CCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LKQVAFTLGIDTANKTEQEIVEEMCQIIYRDFANSGATPMTYLKANSPRERLETWEKLGV
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC
LPRNPDREIREALHQTTMGMDADPVNLILKTIRLGLVDGFAGLKLATDLQDIIFGTPQPV
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCE
VTEANLGVLKEDYVNIIVHGHVPLLSEKIVEWSRKLEDEAKKAGAKGINLAGICCTGNEV
EECCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
LMRQGVPLATNFLAQELAIITGAVDLMVVDVQCIMPSLAEIAACYHTRLVTTMPIVKIPG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
AEHVPFTTETADEASQQIVRMAIESYQKRNPAKVYIPREKAKVVAGFSVEAIVKALAKLN
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHEEECCCHHHHHHHHHHCC
PDDPLKPLIDNIVSGNILGVVATVGCNNVKVKHDWFHIELVKELIKNNVLVVTTGCSAHA
CCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHCCEEEEECCCCHHH
LAKAGLMDPAAAEWAGEGLRAVLTAIGTANDLGGPLPPVLHMGSCVDNSRIGDLVIAVAN
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHH
YLKVSPKDLPIAASAPEYQHEKALSIGTWAVAMGIMTHLGVVPPVVGSSKVTRILTQDAE
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ALIGGKFYVETDPYKAAAGIIEHIKAKRALLNL
HHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKSKLSVDPVIPNLYRKAREEGISTVFDRYEAQQPQCGFGLTGLCCRHCVQGPCRIDPF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
GEGPQAGICGATAEVITARNLLRQVTAGAAAHVDHAYDVLEVLEQIAQGTESYSIKDQEK
CCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LKQVAFTLGIDTANKTEQEIVEEMCQIIYRDFANSGATPMTYLKANSPRERLETWEKLGV
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC
LPRNPDREIREALHQTTMGMDADPVNLILKTIRLGLVDGFAGLKLATDLQDIIFGTPQPV
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCE
VTEANLGVLKEDYVNIIVHGHVPLLSEKIVEWSRKLEDEAKKAGAKGINLAGICCTGNEV
EECCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
LMRQGVPLATNFLAQELAIITGAVDLMVVDVQCIMPSLAEIAACYHTRLVTTMPIVKIPG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCC
AEHVPFTTETADEASQQIVRMAIESYQKRNPAKVYIPREKAKVVAGFSVEAIVKALAKLN
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHEEECCCHHHHHHHHHHCC
PDDPLKPLIDNIVSGNILGVVATVGCNNVKVKHDWFHIELVKELIKNNVLVVTTGCSAHA
CCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHCCEEEEECCCCHHH
LAKAGLMDPAAAEWAGEGLRAVLTAIGTANDLGGPLPPVLHMGSCVDNSRIGDLVIAVAN
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHH
YLKVSPKDLPIAASAPEYQHEKALSIGTWAVAMGIMTHLGVVPPVVGSSKVTRILTQDAE
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ALIGGKFYVETDPYKAAAGIIEHIKAKRALLNL
HHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11024270; 11489867; 11509720 [H]