| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78043876
Identifier: 78043876
GI number: 78043876
Start: 777833
End: 778693
Strand: Direct
Name: 78043876
Synonym: CHY_0879
Alternate gene names: NA
Gene position: 777833-778693 (Clockwise)
Preceding gene: 78044002
Following gene: 78043169
Centisome position: 32.39
GC content: 36.7
Gene sequence:
>861_bases ATGAAGAAGATAGCGGTTTTAGTTTTAACGGTATTTTTACTTGGGATTACTTTACCTGCGTTGGCCGATACTGCTACCAC CGTGCCAGCTAATACCACTCCGGGGGTAAGTGATACTGTTTATGCCAACCAAACTCCAACCGTAAGTGACACTACCTATA CTACCCCATCGGTAACGGATCAAACTTATCAACCTGTACCGGCTCCAGCAGACAACCCGTTGCCTTTTGATTTAAACCTT TTAAACAGCTTGTCTTATAATCAGCTAAAACAGTTAAAGGAAGAAATTGAAAATCTTTTGGAGCAAAAAGAGGAAGAACT TCAGGAATTTAAAGGAATTGTAACTTCCTTTGACGGACAAACTCTTACCGTTAAAGGAGAAAACGAAGAAAAAACTTTTG TAATTACATCGGATACGGACATGGAAGTAAAAGGAGAGTTAGGTGCTGGTTATAAAGCAGAAGTAAAATACGATCCGGCA AGCAACGAGGCTATAAAAGTTGAAGCAAAACCTGTAATACTGGAATATACCGGTACGGTAATTTCTTTTGATGGTAACAA TCTCACCGTTGCCCGGGGAAATGGTGAACAAAAAACCTTTAGTATTACGGAGAACACTAAAATTGAAGGATTAGGCAAGC TTAAAGGAGAAAAAACCATCAAACCTGGTTATAAAGTAGGTGTTAAATACACCTTAACGGGAAATGCTATCGAAGTTAAG GTAATACTGGCAAAGGTTGAAAAGGATAAGGAAAAAGAAAAGGAGAAAGAAAAGGAAAGAAAAAAAGAAAGTAAAAAAGA AAAAGAACAAAAATCAGAAACAAAAAAATTCGTAAAAAAGACATACTACAAAAAAAGATAA
Upstream 100 bases:
>100_bases GGCCGTAAGGCTATGCCAGCCAGCTGCCGAAGGTGTTAAGGGGATTATTAACCCTCCGCTTTCTGGCAGGAGGGTTTAAA ATTTTAAAGGGGGTATTTTA
Downstream 100 bases:
>100_bases ACCTTTTTAATATTAGCCGACTGGTTTACCGCCAGTCGGCTTTATTATTGCATGCGAAAGTTGCCAAGGGGCTGGCAACA CAAAATGTTCCATTTTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKKIAVLVLTVFLLGITLPALADTATTVPANTTPGVSDTVYANQTPTVSDTTYTTPSVTDQTYQPVPAPADNPLPFDLNL LNSLSYNQLKQLKEEIENLLEQKEEELQEFKGIVTSFDGQTLTVKGENEEKTFVITSDTDMEVKGELGAGYKAEVKYDPA SNEAIKVEAKPVILEYTGTVISFDGNNLTVARGNGEQKTFSITENTKIEGLGKLKGEKTIKPGYKVGVKYTLTGNAIEVK VILAKVEKDKEKEKEKEKERKKESKKEKEQKSETKKFVKKTYYKKR
Sequences:
>Translated_286_residues MKKIAVLVLTVFLLGITLPALADTATTVPANTTPGVSDTVYANQTPTVSDTTYTTPSVTDQTYQPVPAPADNPLPFDLNL LNSLSYNQLKQLKEEIENLLEQKEEELQEFKGIVTSFDGQTLTVKGENEEKTFVITSDTDMEVKGELGAGYKAEVKYDPA SNEAIKVEAKPVILEYTGTVISFDGNNLTVARGNGEQKTFSITENTKIEGLGKLKGEKTIKPGYKVGVKYTLTGNAIEVK VILAKVEKDKEKEKEKEKERKKESKKEKEQKSETKKFVKKTYYKKR >Mature_286_residues MKKIAVLVLTVFLLGITLPALADTATTVPANTTPGVSDTVYANQTPTVSDTTYTTPSVTDQTYQPVPAPADNPLPFDLNL LNSLSYNQLKQLKEEIENLLEQKEEELQEFKGIVTSFDGQTLTVKGENEEKTFVITSDTDMEVKGELGAGYKAEVKYDPA SNEAIKVEAKPVILEYTGTVISFDGNNLTVARGNGEQKTFSITENTKIEGLGKLKGEKTIKPGYKVGVKYTLTGNAIEVK VILAKVEKDKEKEKEKEKERKKESKKEKEQKSETKKFVKKTYYKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31742; Mature: 31742
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAVLVLTVFLLGITLPALADTATTVPANTTPGVSDTVYANQTPTVSDTTYTTPSVTD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCC QTYQPVPAPADNPLPFDLNLLNSLSYNQLKQLKEEIENLLEQKEEELQEFKGIVTSFDGQ CCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC TLTVKGENEEKTFVITSDTDMEVKGELGAGYKAEVKYDPASNEAIKVEAKPVILEYTGTV EEEEECCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCEEEEEECCEE ISFDGNNLTVARGNGEQKTFSITENTKIEGLGKLKGEKTIKPGYKVGVKYTLTGNAIEVK EEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEE VILAKVEKDKEKEKEKEKERKKESKKEKEQKSETKKFVKKTYYKKR EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIAVLVLTVFLLGITLPALADTATTVPANTTPGVSDTVYANQTPTVSDTTYTTPSVTD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCC QTYQPVPAPADNPLPFDLNLLNSLSYNQLKQLKEEIENLLEQKEEELQEFKGIVTSFDGQ CCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC TLTVKGENEEKTFVITSDTDMEVKGELGAGYKAEVKYDPASNEAIKVEAKPVILEYTGTV EEEEECCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCEEEEEECCEE ISFDGNNLTVARGNGEQKTFSITENTKIEGLGKLKGEKTIKPGYKVGVKYTLTGNAIEVK EEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEE VILAKVEKDKEKEKEKEKERKKESKKEKEQKSETKKFVKKTYYKKR EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA