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The map label for this gene is dapA2 [H]

Identifier: 78043161

GI number: 78043161

Start: 1176484

End: 1177398

Strand: Direct

Name: dapA2 [H]

Synonym: CHY_1320

Alternate gene names: 78043161

Gene position: 1176484-1177398 (Clockwise)

Preceding gene: 78044740

Following gene: 78043907

Centisome position: 48.99

GC content: 37.49

Gene sequence:

>915_bases
ATGACAGAAATTTTAAATAAATTTCGTGGAGTAATTCCACCGATGTTAACCATTTTCAAAGAGGATGGTACCTTTGATTG
GGAAGGCAATAAAGCTCTAATAGATTTTTTAATCAATGGTGGAGTTCATGGAATATTTGTTTTAGGGAGCTCTGGAGAAT
TTTCTCATCTAAATGCTGAAGAAAGAAAGGAATTTGCCAAATTTGTGGTAGATTATGTAGCAGGCCGGGTACCTGTTTTA
GTAGGTACCGGAAGCAGTAATACCAAGGAAGTTGTGGAATTAACGAAACATGCCAAAGAAATTGGAGCCGATGGTGTGGT
AGTTGTTTCTCCTTATTATTGGGGACTTTCTGAAAAAAATTTATACCAGCATTTTGCAACTGTGGCGAAAGTAGTAGATA
TACCTATAGTTCTTTACAATTTCCCTGATTTGACCGGTCAAAATCTTTCTCCTTCTCTTGTTGCAAAGTTAGCAAGTGAT
TTTCCAAATATTGTTGGTATTAAGGATACAATTGATAGTATAGCTCACATAAGAGAATTAATTTTACAGGTAAAAACAGT
TAGACCGGATTTCAGCGTATTGGCAGGATACGACGACCACCTATTCAATACATTGGCTATGGGTGGAGATGGTGTAATAC
CTGGGACAGCTAATTTTGCGCCTCATATACCTGTAAATATTTATAATAATTTTGTTAAGGGCAATATAGAAGAGAGCATG
AATTGGCACCGGAAACTTTTAAGACTGCCGCGCATTTATAGTCTTGATAAGCCAGCAATTAGCTTATTAAAAGAAGCTTG
CAAGCTTTGTGGTTTACCCGTTGAAAGTTATATACGGCAACCAGCGGGGCGTGCTGATGAAGCAGCAGTAGAAAACCTAA
AAACTTTGCTTAGGGAAGCGGGTTTAATAAAGTAG

Upstream 100 bases:

>100_bases
CAGTAAGATGGGAAATTATGTTGTGGGGTTTCATCTTAATATAAAAATAACCTAGAAAAAATAAATTGAATGTAATTATT
CCAACTCAGGAGGTTTAAAC

Downstream 100 bases:

>100_bases
TTACACAACCTCCTTTTAGCATCTTTTCTGTTTAAAAGGTGTCAAAAGGCTGTTTTTGGATATCTTATAGTAGTCTTTGA
CATCTCCTGGGATTTTTTAA

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTEILNKFRGVIPPMLTIFKEDGTFDWEGNKALIDFLINGGVHGIFVLGSSGEFSHLNAEERKEFAKFVVDYVAGRVPVL
VGTGSSNTKEVVELTKHAKEIGADGVVVVSPYYWGLSEKNLYQHFATVAKVVDIPIVLYNFPDLTGQNLSPSLVAKLASD
FPNIVGIKDTIDSIAHIRELILQVKTVRPDFSVLAGYDDHLFNTLAMGGDGVIPGTANFAPHIPVNIYNNFVKGNIEESM
NWHRKLLRLPRIYSLDKPAISLLKEACKLCGLPVESYIRQPAGRADEAAVENLKTLLREAGLIK

Sequences:

>Translated_304_residues
MTEILNKFRGVIPPMLTIFKEDGTFDWEGNKALIDFLINGGVHGIFVLGSSGEFSHLNAEERKEFAKFVVDYVAGRVPVL
VGTGSSNTKEVVELTKHAKEIGADGVVVVSPYYWGLSEKNLYQHFATVAKVVDIPIVLYNFPDLTGQNLSPSLVAKLASD
FPNIVGIKDTIDSIAHIRELILQVKTVRPDFSVLAGYDDHLFNTLAMGGDGVIPGTANFAPHIPVNIYNNFVKGNIEESM
NWHRKLLRLPRIYSLDKPAISLLKEACKLCGLPVESYIRQPAGRADEAAVENLKTLLREAGLIK
>Mature_303_residues
TEILNKFRGVIPPMLTIFKEDGTFDWEGNKALIDFLINGGVHGIFVLGSSGEFSHLNAEERKEFAKFVVDYVAGRVPVLV
GTGSSNTKEVVELTKHAKEIGADGVVVVSPYYWGLSEKNLYQHFATVAKVVDIPIVLYNFPDLTGQNLSPSLVAKLASDF
PNIVGIKDTIDSIAHIRELILQVKTVRPDFSVLAGYDDHLFNTLAMGGDGVIPGTANFAPHIPVNIYNNFVKGNIEESMN
WHRKLLRLPRIYSLDKPAISLLKEACKLCGLPVESYIRQPAGRADEAAVENLKTLLREAGLIK

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=240, Percent_Identity=32.9166666666667, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI13540533, Length=249, Percent_Identity=25.7028112449799, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI1786463, Length=280, Percent_Identity=53.2142857142857, Blast_Score=327, Evalue=6e-91,
Organism=Escherichia coli, GI87082415, Length=299, Percent_Identity=48.1605351170569, Blast_Score=311, Evalue=3e-86,
Organism=Escherichia coli, GI1788823, Length=296, Percent_Identity=31.7567567567568, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1789620, Length=293, Percent_Identity=25.2559726962457, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: NA

Molecular weight: Translated: 33460; Mature: 33329

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00666 DHDPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEILNKFRGVIPPMLTIFKEDGTFDWEGNKALIDFLINGGVHGIFVLGSSGEFSHLNAE
CHHHHHHHHHHCHHHHHHHHCCCCEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHH
ERKEFAKFVVDYVAGRVPVLVGTGSSNTKEVVELTKHAKEIGADGVVVVSPYYWGLSEKN
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHH
LYQHFATVAKVVDIPIVLYNFPDLTGQNLSPSLVAKLASDFPNIVGIKDTIDSIAHIREL
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
ILQVKTVRPDFSVLAGYDDHLFNTLAMGGDGVIPGTANFAPHIPVNIYNNFVKGNIEESM
HHHHHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
NWHRKLLRLPRIYSLDKPAISLLKEACKLCGLPVESYIRQPAGRADEAAVENLKTLLREA
HHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHC
GLIK
CCCC
>Mature Secondary Structure 
TEILNKFRGVIPPMLTIFKEDGTFDWEGNKALIDFLINGGVHGIFVLGSSGEFSHLNAE
HHHHHHHHHHCHHHHHHHHCCCCEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHH
ERKEFAKFVVDYVAGRVPVLVGTGSSNTKEVVELTKHAKEIGADGVVVVSPYYWGLSEKN
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHH
LYQHFATVAKVVDIPIVLYNFPDLTGQNLSPSLVAKLASDFPNIVGIKDTIDSIAHIREL
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
ILQVKTVRPDFSVLAGYDDHLFNTLAMGGDGVIPGTANFAPHIPVNIYNNFVKGNIEESM
HHHHHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
NWHRKLLRLPRIYSLDKPAISLLKEACKLCGLPVESYIRQPAGRADEAAVENLKTLLREA
HHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHC
GLIK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]