| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is arsB [C]
Identifier: 78043907
GI number: 78043907
Start: 1177528
End: 1178805
Strand: Direct
Name: arsB [C]
Synonym: CHY_1321
Alternate gene names: 78043907
Gene position: 1177528-1178805 (Clockwise)
Preceding gene: 78043161
Following gene: 78044351
Centisome position: 49.03
GC content: 40.92
Gene sequence:
>1278_bases ATGAGTCAGTCATTAATTGCGTTAACCGTATTTTTTGCAACTTATACCTTAATTATTTCTGAAAAACTACACCGGGCTAT AGCAGCGCTTTTAGGCGGTACTTTATTAATTGTTTTGGGCGTTTTAAGTCAGGAAAAAGCAATTCACCATATTGACTGGA ATACCTTGGGCCTATTAATCGGAATGATGATTATTGTCGGCATTACCAAAAAAACAGGAGTCTTTCAGTATTTGGCAGTA AAAGCGGTTAAATGGGCCAAAGGGGAGCCAGTTTATATTTTAATAGCTCTGGCTACCGTTACCGCCTTTTTATCGGCATT TTTAGATAACGTTACAACAGTTTTACTAATTGTTCCGGTAACCTTCACTATAACTGACCGGCTGGGGATAAATCCTATTC CCTTTCTTATTTCACAGGTGTTAGCCAGTAACATCGGCGGTACCGCCACTTTAATCGGTGACCCGCCCAATATTATGATT GGCAGCCAAACTCATCTGGATTTCCTAGATTTTCTTAAAAATTTAACACCGGTTATTATAGTTATCCATATCGTAACCAT GTTTCTTTTTTACTTGATTTATTATAAGGAATTTAAAGTACCTGGGGAATTAAAAAAGAAATTACTGGAATTAAATGAAT TAGATGAAATTAAAGATTTTGCCCTTTTAAAGAAAAGCCTTTTTGTCTTAGGCCTCGTCATTCTTGGCTTTATTTTGCAC GGTGCACTTGGTTTAGAATCGGCCACCATCGCCTTATTTGGTGCAGCACTTTTATTAACCATCACCCGGGACGAGCCGGA GGAAGTGCTTTTAACCGTGGAATGGCCTTCCATCTTCTTTTTCCTCGGCTTGTTTATTGTGGTAGGAGGCCTTGTGGAAA CGGGAGTTATCGACCGGGTAGCCCGCTGGAGCCTGGAAGCCACCAAAGGTAATTTCACTTTAACTGGGATGTTAATTCTC TGGCTTTCGGCTATAACATCGGCATTTGTTGATAACATCCCCTTTGTGGCCACGATGATTCCGTTAATTCAGAAGATGGG TGCTTTAGCCGGCATGACACCACAGGCTTTAGAGCCGCTGTGGTGGGCCTTATCTTTAGGGGCCTGCCTGGGCGGCAACG GTACGATAATCGGTGCTTCAGCTAACGTAATTGTGGCAGGGTTAGCTGAGAAAAACGGCTATCCGATTTCGTTTATTAGC TTTATGAAATTAGCCTTTCCTTTAATGTTAGTTTCGGTAGTAATTTCCATGGTTTATCTTCTCCTGTTTTACTTTTAA
Upstream 100 bases:
>100_bases GTTTAAAAGGTGTCAAAAGGCTGTTTTTGGATATCTTATAGTAGTCTTTGACATCTCCTGGGATTTTTTAAAGATTTTTT GTGAATAAGGAGGAAAATCA
Downstream 100 bases:
>100_bases AGGAAAAACATATAAATTTTTCAATTGAAAAAATTAGCTTTGAACGCCTTATGAAAAAGGTTATTTGAGTAGGATTTTTA TTAAATGGTTAAGGAGGAAA
Product: arsenic transporter family protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSQSLIALTVFFATYTLIISEKLHRAIAALLGGTLLIVLGVLSQEKAIHHIDWNTLGLLIGMMIIVGITKKTGVFQYLAV KAVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPVTFTITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMI GSQTHLDFLDFLKNLTPVIIVIHIVTMFLFYLIYYKEFKVPGELKKKLLELNELDEIKDFALLKKSLFVLGLVILGFILH GALGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRVARWSLEATKGNFTLTGMLIL WLSAITSAFVDNIPFVATMIPLIQKMGALAGMTPQALEPLWWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFIS FMKLAFPLMLVSVVISMVYLLLFYF
Sequences:
>Translated_425_residues MSQSLIALTVFFATYTLIISEKLHRAIAALLGGTLLIVLGVLSQEKAIHHIDWNTLGLLIGMMIIVGITKKTGVFQYLAV KAVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPVTFTITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMI GSQTHLDFLDFLKNLTPVIIVIHIVTMFLFYLIYYKEFKVPGELKKKLLELNELDEIKDFALLKKSLFVLGLVILGFILH GALGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRVARWSLEATKGNFTLTGMLIL WLSAITSAFVDNIPFVATMIPLIQKMGALAGMTPQALEPLWWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFIS FMKLAFPLMLVSVVISMVYLLLFYF >Mature_424_residues SQSLIALTVFFATYTLIISEKLHRAIAALLGGTLLIVLGVLSQEKAIHHIDWNTLGLLIGMMIIVGITKKTGVFQYLAVK AVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPVTFTITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMIG SQTHLDFLDFLKNLTPVIIVIHIVTMFLFYLIYYKEFKVPGELKKKLLELNELDEIKDFALLKKSLFVLGLVILGFILHG ALGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRVARWSLEATKGNFTLTGMLILW LSAITSAFVDNIPFVATMIPLIQKMGALAGMTPQALEPLWWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFISF MKLAFPLMLVSVVISMVYLLLFYF
Specific function: Involved In Arsenical Resistance. Thought To Form The Channel Of An Arsenite Pump (By Similarity). [C]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Homo sapiens, GI157266326, Length=508, Percent_Identity=34.8425196850394, Blast_Score=228, Evalue=7e-60, Organism=Escherichia coli, GI87082277, Length=305, Percent_Identity=25.9016393442623, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1787039, Length=374, Percent_Identity=24.8663101604278, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574683, Length=501, Percent_Identity=34.7305389221557, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI28574681, Length=501, Percent_Identity=34.7305389221557, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI28574685, Length=501, Percent_Identity=34.7305389221557, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI28574678, Length=501, Percent_Identity=34.7305389221557, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI24581759, Length=501, Percent_Identity=34.7305389221557, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI19920704, Length=501, Percent_Identity=34.7305389221557, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI45550608, Length=479, Percent_Identity=33.6116910229645, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI221472711, Length=499, Percent_Identity=27.6553106212425, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24581764, Length=499, Percent_Identity=27.6553106212425, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI85724998, Length=479, Percent_Identity=27.348643006263, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI62484377, Length=479, Percent_Identity=27.348643006263, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI24656008, Length=469, Percent_Identity=27.9317697228145, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 - InterPro: IPR004680 [H]
Pfam domain/function: PF03600 CitMHS [H]
EC number: NA
Molecular weight: Translated: 46234; Mature: 46103
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLIALTVFFATYTLIISEKLHRAIAALLGGTLLIVLGVLSQEKAIHHIDWNTLGLLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHH GMMIIVGITKKTGVFQYLAVKAVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPV HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH TFTITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMIGSQTHLDFLDFLKNLTPVII HHEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCHHHHHHHHHCCHHHHH VIHIVTMFLFYLIYYKEFKVPGELKKKLLELNELDEIKDFALLKKSLFVLGLVILGFILH HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRV HHHCCCHHHHHHHHHHHHEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ARWSLEATKGNFTLTGMLILWLSAITSAFVDNIPFVATMIPLIQKMGALAGMTPQALEPL HHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH WWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFISFMKLAFPLMLVSVVISMVYL HHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLFYF HHHHC >Mature Secondary Structure SQSLIALTVFFATYTLIISEKLHRAIAALLGGTLLIVLGVLSQEKAIHHIDWNTLGLLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHH GMMIIVGITKKTGVFQYLAVKAVKWAKGEPVYILIALATVTAFLSAFLDNVTTVLLIVPV HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH TFTITDRLGINPIPFLISQVLASNIGGTATLIGDPPNIMIGSQTHLDFLDFLKNLTPVII HHEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCHHHHHHHHHCCHHHHH VIHIVTMFLFYLIYYKEFKVPGELKKKLLELNELDEIKDFALLKKSLFVLGLVILGFILH HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALGLESATIALFGAALLLTITRDEPEEVLLTVEWPSIFFFLGLFIVVGGLVETGVIDRV HHHCCCHHHHHHHHHHHHEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ARWSLEATKGNFTLTGMLILWLSAITSAFVDNIPFVATMIPLIQKMGALAGMTPQALEPL HHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH WWALSLGACLGGNGTIIGASANVIVAGLAEKNGYPISFISFMKLAFPLMLVSVVISMVYL HHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLFYF HHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]