Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is vorB [H]

Identifier: 78042939

GI number: 78042939

Start: 1167031

End: 1168113

Strand: Direct

Name: vorB [H]

Synonym: CHY_1311

Alternate gene names: 78042939

Gene position: 1167031-1168113 (Clockwise)

Preceding gene: 78044600

Following gene: 78043485

Centisome position: 48.6

GC content: 39.52

Gene sequence:

>1083_bases
ATGGGTAAAGTATTATTTAAAGGTGCTGAAGCCATTGCGGAAGCTGCCATTCGAAGTGGATGTAAATTTTTCTTTGGCTA
TCCAATTACGCCTCAGACTGAAGTAGCTGAATATATGGCAAAAAGGTTACCGCAAGTTGGGGGAGTTTACCTTCAAGCGG
AAAGTGAAGTTTCAGCTATTAATATGGTATTTGGGGCAGCTGCTACAGGAGCACGGGTTATGACATCTTCATCCAGTCCT
GGTGTGAGCTTAAAGCAAGAGGGGATTTCTTATATTGCAGGAGCTGAATTACCTTGTGTTGTTGTAAATATCATGCGTGG
TGGACCTGGTTTAGGTTGTATTCAGGCAGCCCAATCAGATTATTTTCAAGCGGTAAAAGGTGGCGGACATGGAGACTATA
AAAACATTGTTTTAGCACCGTCAACTGTTCAAGAAGCGGTTGATTTAGTGTCTCTTGCCTTTGATTTAGCAGATAAATAT
AGAAATCCAGTAATGATTTTAGGAGATGCGGTTCTTGCACAAATAATGGAGCCGATTGAATTACCTGAAGAGAAAAAGGA
ATTGCCTGAAAAACCATGGGCAATTACTGGTTGCAGTAATCGGGAGCAAAATATAATTACCTCATCATACCCGGTACCTG
AGGATTTAGAAGCTGTAAATGAAAGGCTCAATGCAAAGTATAAGCAGATTATAAAAGAAGAACAACGCTGGGAAGAAGAT
GGGGTAGATGATGCAGAGTTGGTTTTTGTTGCATATGGAACTAGTGCCCGGATAGCAAAAGATGCTGTTGAAACTTTAAG
AAATAAAGGAAAGAAAGTTGGTTTGATTAGACCAATAACCTTATGGCCTTTCCCGAAAAAAGCGTTTAAGAATAGAATGG
CGGGCAAGAAAATATTAGTAGTTGAGATGAGCAAAGGACAAATGGTCGAAGACGTTGAAATTGCAGTTAAAGGTCAAGGC
GAAATTTATTTCTATGGAAGAACAGGTGGCATTGTGCCCTATGTTGAAGAAGTTCTCGAAGTAGCTGAAGCTATTTTAAA
CAATGAAAATGTTAAAAAATGGGGGGAAGATGATGAAAACTAA

Upstream 100 bases:

>100_bases
TATGCAACCATTTCAAATATTGAAGAATGTATTGGCTGTGGAAGATGCTATCAGATTTGCCCTGACCTGGTATTTGAAGT
GAAAGAGGAGGCGAAGATTA

Downstream 100 bases:

>100_bases
AGAGTACATTCGTCCAAAAAGTTTAAAGCCTACCCAAACCCACTACTGTCCAGGGTGTACTCATGGGATTATCCATCGGA
TTTTAGCTGAAGTCTTAGAT

Product: 2-ketoisovalerate ferredoxin reductase

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MGKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAINMVFGAAATGARVMTSSSSP
GVSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSDYFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKY
RNPVMILGDAVLAQIMEPIELPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEED
GVDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILVVEMSKGQMVEDVEIAVKGQG
EIYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN

Sequences:

>Translated_360_residues
MGKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAINMVFGAAATGARVMTSSSSP
GVSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSDYFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKY
RNPVMILGDAVLAQIMEPIELPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEED
GVDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILVVEMSKGQMVEDVEIAVKGQG
EIYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN
>Mature_359_residues
GKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAINMVFGAAATGARVMTSSSSPG
VSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSDYFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKYR
NPVMILGDAVLAQIMEPIELPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEEDG
VDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILVVEMSKGQMVEDVEIAVKGQGE
IYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N [H]

EC number: =1.2.7.7 [H]

Molecular weight: Translated: 39261; Mature: 39130

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAI
CCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCHHCCEEEEECCCHHHH
NMVFGAAATGARVMTSSSSPGVSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSD
HHHHHCCCCCCEEEECCCCCCCCHHHHCCHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH
YFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKYRNPVMILGDAVLAQIMEPIE
HHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHC
LPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEED
CCHHHHHCCCCCEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILV
CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECEEECCCCHHHHHHHCCCCEEEE
VEMSKGQMVEDVEIAVKGQGEIYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN
EECCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure 
GKVLFKGAEAIAEAAIRSGCKFFFGYPITPQTEVAEYMAKRLPQVGGVYLQAESEVSAI
CCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCHHCCEEEEECCCHHHH
NMVFGAAATGARVMTSSSSPGVSLKQEGISYIAGAELPCVVVNIMRGGPGLGCIQAAQSD
HHHHHCCCCCCEEEECCCCCCCCHHHHCCHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH
YFQAVKGGGHGDYKNIVLAPSTVQEAVDLVSLAFDLADKYRNPVMILGDAVLAQIMEPIE
HHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHC
LPEEKKELPEKPWAITGCSNREQNIITSSYPVPEDLEAVNERLNAKYKQIIKEEQRWEED
CCHHHHHCCCCCEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVDDAELVFVAYGTSARIAKDAVETLRNKGKKVGLIRPITLWPFPKKAFKNRMAGKKILV
CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECEEECCCCHHHHHHHCCCCEEEE
VEMSKGQMVEDVEIAVKGQGEIYFYGRTGGIVPYVEEVLEVAEAILNNENVKKWGEDDEN
EECCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]