| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is aldH [H]
Identifier: 77761163
GI number: 77761163
Start: 2042098
End: 2043693
Strand: Direct
Name: aldH [H]
Synonym: XC_1702
Alternate gene names: 77761163
Gene position: 2042098-2043693 (Clockwise)
Preceding gene: 66768025
Following gene: 66768027
Centisome position: 39.66
GC content: 70.43
Gene sequence:
>1596_bases ATGACCCAGACTCTCCAACCCGTGCTGCTGGCCGGCCAATGGCAAGCCAGCCGCGATGCCGCCGGCAGTTTTCGCGCTGC CGACCCCACCACCGGCGAGGCGATCGGGCCGCAGTTCCCGGTCAGCGGTGCCGACGATATCGACACCGCCATTGCGGCGG CGCACGCGGTGGCTGCCGAACTTGCCGCCGCACCTGCCGAACGGATCGCTGCGTTTCTGGACGCCTACGCGGATGCGCTG GACGCCGATGCCGAGACCCTGGTGGCGCTGGCCCATGCCGAAACCGCAATGCCGGCGCCCACGCGTTTGCGCGGCAACGA ACTGCCGCGCACCAGCGGGCAGCTACGCCAGGCCGCCCAGGCGGTGCGCAGCTACAGCTGGACGCACCCCGTCATCGATA CCGCCGCCGATCTGCGCTCGCATCTGGCGCCGCTGGGCAAGCCGGTGCTGGTGTTCGGGCCGAATAACTTTCCGTTTGCG TTCAACGCGATTGCCGGCAGCGATTTCGCCTCGGCGATCGCGGCGCGCAATCCGGTGATCGCCAAGGCGCATCCGCTGCA TCCGGCCACCAGCCAGCGCATGGCCGAGCTGGCGCATCAGGCGCTGTTGACTGCCGGGCTGCCGGCCGCGGCGGTGCAGT TGCTGTATCACTTCGACAACGCGCTTGGCCTGCGACTGGCCGGCGATGCACGGCTGGGGGCGATTGGTTTCACCGGCAGC CGTGCCGGTGGCCTGGCGCTGAAGGCCGCCGCCGATGCCGCCGGTGTGCCGTTCTACGCCGAGTTGTCCAGCGTCAACCC GGTGTTCCTGCTGCCCGGCGCGGTGGCCGAACGCGGCGCCGCACTGGCACAGGAATTCTTCGCCTCGTGCACGCTGGGCA GCGGCCAGTTCTGCACCAATCCCGGCGTGCTGGTGCTGCCGCACGGCGAGGCGGGCGATGCACTGGTGGCCGCGGCTACC GCGCACTTTGCCGGCGCCGCACCGATGGTGCTGTTTTCGCAAGGAGGCGTGGATGGCGTGCAGCGCGGCGTGGAGACCTT GCGCGCGGCCGGTGCCCAGGTGCTGGCCGGGGCAGCGGCAGGCGAGGGCGGCTACCGCTATGCGCCAACCTTGCTCAGCG TGGAAGCGGACGCCTTCATCGCGGCGCCGCACGCGCTGCAGACCGAAGCTTTTGGCCCGGTGAGCCTGCTGGTGCGCACG CGCGACAGCGCCCAGATGGCGCAGGTGGCCGCCGCATTCGAAGGCAACCTCACCGGCACGCTGTACCGCGCCAGCGATGG CAGTGACGATGCCGCCTGGCAACAGATTGCACCGGTGCTGCGCGCACGCGTGGGCCGGTTGATCAACAGCAAGATGCCGA CCGGCGTGGCGGTGAGTGCCGCGCAGAATCATGGTGGGCCGTTCCCCAGCACCGGGCATCCGGGCTTCACCGCCGTGGGC ATGCCGGGCGCAATCCGCCGGTTTGCCGCCTTGCACAGCTATGACGCCGTGCCGGATGCGCTGCTGCCGATGGAGCTGCG CCAGCGCAACCCGGGCGGTGTGGCACGCCTGGTGGATGGGCAGTGGAGCAGCGCCGACCTCGGGGCGCATGCATGA
Upstream 100 bases:
>100_bases ACGATTCAAACGGGTGGCACGTCGCAGGCGCGTTACCCTCATCCGCCGTTCGATCGCCCGTGCTGCGTGCGGGCGCTTCC ACGTAACCGAAGGTGCCGCG
Downstream 100 bases:
>100_bases GCACGCAGATCGGCGGGATGTCGCTGGACCAGGCCCGCACGCAGCTGGCGCCGTGGACGCAGCGGGCAGCGCCGATCGGC GCGGACGAATACCAGCAGCG
Product: ketoglutarate semialdehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MTQTLQPVLLAGQWQASRDAAGSFRAADPTTGEAIGPQFPVSGADDIDTAIAAAHAVAAELAAAPAERIAAFLDAYADAL DADAETLVALAHAETAMPAPTRLRGNELPRTSGQLRQAAQAVRSYSWTHPVIDTAADLRSHLAPLGKPVLVFGPNNFPFA FNAIAGSDFASAIAARNPVIAKAHPLHPATSQRMAELAHQALLTAGLPAAAVQLLYHFDNALGLRLAGDARLGAIGFTGS RAGGLALKAAADAAGVPFYAELSSVNPVFLLPGAVAERGAALAQEFFASCTLGSGQFCTNPGVLVLPHGEAGDALVAAAT AHFAGAAPMVLFSQGGVDGVQRGVETLRAAGAQVLAGAAAGEGGYRYAPTLLSVEADAFIAAPHALQTEAFGPVSLLVRT RDSAQMAQVAAAFEGNLTGTLYRASDGSDDAAWQQIAPVLRARVGRLINSKMPTGVAVSAAQNHGGPFPSTGHPGFTAVG MPGAIRRFAALHSYDAVPDALLPMELRQRNPGGVARLVDGQWSSADLGAHA
Sequences:
>Translated_531_residues MTQTLQPVLLAGQWQASRDAAGSFRAADPTTGEAIGPQFPVSGADDIDTAIAAAHAVAAELAAAPAERIAAFLDAYADAL DADAETLVALAHAETAMPAPTRLRGNELPRTSGQLRQAAQAVRSYSWTHPVIDTAADLRSHLAPLGKPVLVFGPNNFPFA FNAIAGSDFASAIAARNPVIAKAHPLHPATSQRMAELAHQALLTAGLPAAAVQLLYHFDNALGLRLAGDARLGAIGFTGS RAGGLALKAAADAAGVPFYAELSSVNPVFLLPGAVAERGAALAQEFFASCTLGSGQFCTNPGVLVLPHGEAGDALVAAAT AHFAGAAPMVLFSQGGVDGVQRGVETLRAAGAQVLAGAAAGEGGYRYAPTLLSVEADAFIAAPHALQTEAFGPVSLLVRT RDSAQMAQVAAAFEGNLTGTLYRASDGSDDAAWQQIAPVLRARVGRLINSKMPTGVAVSAAQNHGGPFPSTGHPGFTAVG MPGAIRRFAALHSYDAVPDALLPMELRQRNPGGVARLVDGQWSSADLGAHA >Mature_530_residues TQTLQPVLLAGQWQASRDAAGSFRAADPTTGEAIGPQFPVSGADDIDTAIAAAHAVAAELAAAPAERIAAFLDAYADALD ADAETLVALAHAETAMPAPTRLRGNELPRTSGQLRQAAQAVRSYSWTHPVIDTAADLRSHLAPLGKPVLVFGPNNFPFAF NAIAGSDFASAIAARNPVIAKAHPLHPATSQRMAELAHQALLTAGLPAAAVQLLYHFDNALGLRLAGDARLGAIGFTGSR AGGLALKAAADAAGVPFYAELSSVNPVFLLPGAVAERGAALAQEFFASCTLGSGQFCTNPGVLVLPHGEAGDALVAAATA HFAGAAPMVLFSQGGVDGVQRGVETLRAAGAQVLAGAAAGEGGYRYAPTLLSVEADAFIAAPHALQTEAFGPVSLLVRTR DSAQMAQVAAAFEGNLTGTLYRASDGSDDAAWQQIAPVLRARVGRLINSKMPTGVAVSAAQNHGGPFPSTGHPGFTAVGM PGAIRRFAALHSYDAVPDALLPMELRQRNPGGVARLVDGQWSSADLGAHA
Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787250, Length=362, Percent_Identity=29.5580110497238, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082295, Length=403, Percent_Identity=24.8138957816377, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787558, Length=408, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.4 [H]
Molecular weight: Translated: 54126; Mature: 53994
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTLQPVLLAGQWQASRDAAGSFRAADPTTGEAIGPQFPVSGADDIDTAIAAAHAVAAE CCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LAAAPAERIAAFLDAYADALDADAETLVALAHAETAMPAPTRLRGNELPRTSGQLRQAAQ HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH AVRSYSWTHPVIDTAADLRSHLAPLGKPVLVFGPNNFPFAFNAIAGSDFASAIAARNPVI HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHHHHCCCCE AKAHPLHPATSQRMAELAHQALLTAGLPAAAVQLLYHFDNALGLRLAGDARLGAIGFTGS ECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCC RAGGLALKAAADAAGVPFYAELSSVNPVFLLPGAVAERGAALAQEFFASCTLGSGQFCTN CCCCEEEEECCCCCCCCEEEHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCEECC PGVLVLPHGEAGDALVAAATAHFAGAAPMVLFSQGGVDGVQRGVETLRAAGAQVLAGAAA CCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHEECCCC GEGGYRYAPTLLSVEADAFIAAPHALQTEAFGPVSLLVRTRDSAQMAQVAAAFEGNLTGT CCCCCEECCEEEEEECCCEEECCCHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEE LYRASDGSDDAAWQQIAPVLRARVGRLINSKMPTGVAVSAAQNHGGPFPSTGHPGFTAVG EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCEEEEC MPGAIRRFAALHSYDAVPDALLPMELRQRNPGGVARLVDGQWSSADLGAHA CCHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure TQTLQPVLLAGQWQASRDAAGSFRAADPTTGEAIGPQFPVSGADDIDTAIAAAHAVAAE CCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LAAAPAERIAAFLDAYADALDADAETLVALAHAETAMPAPTRLRGNELPRTSGQLRQAAQ HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH AVRSYSWTHPVIDTAADLRSHLAPLGKPVLVFGPNNFPFAFNAIAGSDFASAIAARNPVI HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHHHHCCCCE AKAHPLHPATSQRMAELAHQALLTAGLPAAAVQLLYHFDNALGLRLAGDARLGAIGFTGS ECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCC RAGGLALKAAADAAGVPFYAELSSVNPVFLLPGAVAERGAALAQEFFASCTLGSGQFCTN CCCCEEEEECCCCCCCCEEEHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCEECC PGVLVLPHGEAGDALVAAATAHFAGAAPMVLFSQGGVDGVQRGVETLRAAGAQVLAGAAA CCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHEECCCC GEGGYRYAPTLLSVEADAFIAAPHALQTEAFGPVSLLVRTRDSAQMAQVAAAFEGNLTGT CCCCCEECCEEEEEECCCEEECCCHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEE LYRASDGSDDAAWQQIAPVLRARVGRLINSKMPTGVAVSAAQNHGGPFPSTGHPGFTAVG EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCEEEEC MPGAIRRFAALHSYDAVPDALLPMELRQRNPGGVARLVDGQWSSADLGAHA CCHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8527447; 10903148 [H]