| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748750
Identifier: 77748750
GI number: 77748750
Start: 4695736
End: 4697412
Strand: Reverse
Name: 77748750
Synonym: XAC4004
Alternate gene names: NA
Gene position: 4697412-4695736 (Counterclockwise)
Preceding gene: 21244723
Following gene: 21244720
Centisome position: 90.76
GC content: 66.67
Gene sequence:
>1677_bases TTGCAAGGCCTCACCGTGAATCCGATGCGTATCCTGCTGTTGTCTGCCTGCCTGTTTGTGGGAGGTGTGGCGCAGGCCGC CAACGATCTGCCGGGCGGCGGCATCGATGCCGAGGCATTGTCGCGTCACGTGCGCTTGCTGGCGTCGGACGAATTCGAAG GGCGCGCGCCGGCCAGCGCCGGTGAGCAGCGCACGGTCGATTACCTGGTCGAGCAGTTCAAGGCGGCCGACCTGGAGCCA GGTGGCGAGCAGGGCGGCTGGACCCAGGCCGTGCCGCTGGTGCGCGCGCAGGTGGATGGCCCGGTGCGCGCAAGCCTGCG CGTCGGCGGCAAGACCCAGGCGCTGGTCAATGGCAGCGATGTGACCCTGCAAAGCCTGCGCCCGCAGCAGGCGGTCGCGT TGAAGAACGCGCCACTGGTCTTCGTCGGTTACGGCATCAGTGCGCCAGAGCGCCAATGGGACGACTACAAGGGCGTGGAC CTGCGCGGCAAGATTGCGGTGGTGCTGATCAACGATGCCGATTTCGAATCGCCGCAGCCGGGCGCATTCGACGGCAAGGC CGTGACCTATTACGGCCGATGGACCTACAAGTACGAAGAGGCGGCGCGGCGCGGCGCGGCCGGGGTGTTGATCGTGCACG AGACAGCGCCGGCGGCGTATGGCTGGGGCACGGTGCAGAGCTCGGGCATGTCGCCGTTGTTCGATATCGAGCGCAGCGAT GCCGATGCCCGCGCGCAGCACGTGCCGGTGCGTGGCTGGATGCAGCGTGCGCTGGCGGTATCGTTGTTCAAGCAGGCCGG CCTGGACTTCGAACAGGCCAAGGCACGTGCGCAGCAGCGCGACTTCGCGCCTGTGGCCCTGGGCGATGCGACGTTGTCGG TGGATTTCAAGCTCAAGCGCGAGCGTGTGGTGACGCATAACGTGGTGGCCAAACTCACCGGCAGTCAGCATCCGGATGAG ACGGTGATCTTCTCCGCGCACTGGGATGCGTTCGGGATCGGCAAGGCCGATGCCAGTGGCGATGCGATTCGACGCGGCGC CGTGGACAACGCCACCGGCGTGGCCAGCGTGCTGGAACTGGCGCGCGTGTTCGCAGCCGGCCCCAAGCCGCAGCGCACGT TGTACTTTATTGCCTTGACTGCCGAAGAAAAGGGCCTGCTCGGCGCCAACTACTACGCCGCGCACCCGCTGGCGCCGTTG GACAAGACCGTGGCCGTGCTCAACATGGAAATGTTCAGCCCCGATGGTCCGACCCGCGACATCGCCTCGTGGGGACGTGG GCGGGTGTCGCTGGAAGACGACCTGGAAACCGCCGCCAAGGCGCGTGGTCGCAGCTATTCGCCGGACCCGAATCTGGAAG CAGGCTTCTTCTACCGCGCCGATCATTTTGCGTTCGCGCGCATGGGTGTGCCGGCGATCACCGCCGGCCCCGGCCTGGAC ATGCTCGACGGCGGCGTCGCGGCAGGCAAGGCACTGCGCGAGACGTATTTCGCCGATTGCTATCACCAGCCGTGCGATCG CTGGACCCCGCAATGGGATGCCAGCGGCCATGCCGCCGACACCACGCTGGTCTACGACGTGGGCGTGGCGCTGGCCAATG GCCGGCAGTGGCCGAGCTGGCAGGATGGCTCTGAATTCAAGGCGATCCGTGCCAAGAGCGATGCGGTGCGCAAATAA
Upstream 100 bases:
>100_bases CCACGCGTCGCCACGCATGCAGTCCATCCGATCGAACGCAATTTCGCATCGTGGCGCTCCGGCGTTGGCTGCACGCTTGT AAACTATGTGTCATCTACCG
Downstream 100 bases:
>100_bases GCGCGCAGGAGCGAGAGGGCACCGCGCGCTCCATCACGGGCTGAGAGCAGCGTCCAAGACGACTGCGCTGATCGCCAGAA GAGCGCAGCTGGACTCCATG
Product: peptidase
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Glutamate Carboxypeptidase II; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; Peptidase Family M; M20/M25/M40 Family Peptidase; Aminopeptidase-Like Protein; Component Of l Biopolymer Transport System; PDZ Domain-Containing Protein
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MQGLTVNPMRILLLSACLFVGGVAQAANDLPGGGIDAEALSRHVRLLASDEFEGRAPASAGEQRTVDYLVEQFKAADLEP GGEQGGWTQAVPLVRAQVDGPVRASLRVGGKTQALVNGSDVTLQSLRPQQAVALKNAPLVFVGYGISAPERQWDDYKGVD LRGKIAVVLINDADFESPQPGAFDGKAVTYYGRWTYKYEEAARRGAAGVLIVHETAPAAYGWGTVQSSGMSPLFDIERSD ADARAQHVPVRGWMQRALAVSLFKQAGLDFEQAKARAQQRDFAPVALGDATLSVDFKLKRERVVTHNVVAKLTGSQHPDE TVIFSAHWDAFGIGKADASGDAIRRGAVDNATGVASVLELARVFAAGPKPQRTLYFIALTAEEKGLLGANYYAAHPLAPL DKTVAVLNMEMFSPDGPTRDIASWGRGRVSLEDDLETAAKARGRSYSPDPNLEAGFFYRADHFAFARMGVPAITAGPGLD MLDGGVAAGKALRETYFADCYHQPCDRWTPQWDASGHAADTTLVYDVGVALANGRQWPSWQDGSEFKAIRAKSDAVRK
Sequences:
>Translated_558_residues MQGLTVNPMRILLLSACLFVGGVAQAANDLPGGGIDAEALSRHVRLLASDEFEGRAPASAGEQRTVDYLVEQFKAADLEP GGEQGGWTQAVPLVRAQVDGPVRASLRVGGKTQALVNGSDVTLQSLRPQQAVALKNAPLVFVGYGISAPERQWDDYKGVD LRGKIAVVLINDADFESPQPGAFDGKAVTYYGRWTYKYEEAARRGAAGVLIVHETAPAAYGWGTVQSSGMSPLFDIERSD ADARAQHVPVRGWMQRALAVSLFKQAGLDFEQAKARAQQRDFAPVALGDATLSVDFKLKRERVVTHNVVAKLTGSQHPDE TVIFSAHWDAFGIGKADASGDAIRRGAVDNATGVASVLELARVFAAGPKPQRTLYFIALTAEEKGLLGANYYAAHPLAPL DKTVAVLNMEMFSPDGPTRDIASWGRGRVSLEDDLETAAKARGRSYSPDPNLEAGFFYRADHFAFARMGVPAITAGPGLD MLDGGVAAGKALRETYFADCYHQPCDRWTPQWDASGHAADTTLVYDVGVALANGRQWPSWQDGSEFKAIRAKSDAVRK >Mature_558_residues MQGLTVNPMRILLLSACLFVGGVAQAANDLPGGGIDAEALSRHVRLLASDEFEGRAPASAGEQRTVDYLVEQFKAADLEP GGEQGGWTQAVPLVRAQVDGPVRASLRVGGKTQALVNGSDVTLQSLRPQQAVALKNAPLVFVGYGISAPERQWDDYKGVD LRGKIAVVLINDADFESPQPGAFDGKAVTYYGRWTYKYEEAARRGAAGVLIVHETAPAAYGWGTVQSSGMSPLFDIERSD ADARAQHVPVRGWMQRALAVSLFKQAGLDFEQAKARAQQRDFAPVALGDATLSVDFKLKRERVVTHNVVAKLTGSQHPDE TVIFSAHWDAFGIGKADASGDAIRRGAVDNATGVASVLELARVFAAGPKPQRTLYFIALTAEEKGLLGANYYAAHPLAPL DKTVAVLNMEMFSPDGPTRDIASWGRGRVSLEDDLETAAKARGRSYSPDPNLEAGFFYRADHFAFARMGVPAITAGPGLD MLDGGVAAGKALRETYFADCYHQPCDRWTPQWDASGHAADTTLVYDVGVALANGRQWPSWQDGSEFKAIRAKSDAVRK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59945; Mature: 59945
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLTVNPMRILLLSACLFVGGVAQAANDLPGGGIDAEALSRHVRLLASDEFEGRAPASA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCC GEQRTVDYLVEQFKAADLEPGGEQGGWTQAVPLVRAQVDGPVRASLRVGGKTQALVNGSD CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCEEEEECCCCEEEEEEECCCEEEEECCCC VTLQSLRPQQAVALKNAPLVFVGYGISAPERQWDDYKGVDLRGKIAVVLINDADFESPQP EEHHHCCCHHHHEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC GAFDGKAVTYYGRWTYKYEEAARRGAAGVLIVHETAPAAYGWGTVQSSGMSPLFDIERSD CCCCCCEEEEEEEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCC ADARAQHVPVRGWMQRALAVSLFKQAGLDFEQAKARAQQRDFAPVALGDATLSVDFKLKR CCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCEEEEEEEEECC ERVVTHNVVAKLTGSQHPDETVIFSAHWDAFGIGKADASGDAIRRGAVDNATGVASVLEL HHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHCCCCCCHHHHHHHHHH ARVFAAGPKPQRTLYFIALTAEEKGLLGANYYAAHPLAPLDKTVAVLNMEMFSPDGPTRD HHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCHH IASWGRGRVSLEDDLETAAKARGRSYSPDPNLEAGFFYRADHFAFARMGVPAITAGPGLD HHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHCCCCEEECCCCCC MLDGGVAAGKALRETYFADCYHQPCDRWTPQWDASGHAADTTLVYDVGVALANGRQWPSW HHCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCCC QDGSEFKAIRAKSDAVRK CCCCHHHEEECCHHHCCC >Mature Secondary Structure MQGLTVNPMRILLLSACLFVGGVAQAANDLPGGGIDAEALSRHVRLLASDEFEGRAPASA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCC GEQRTVDYLVEQFKAADLEPGGEQGGWTQAVPLVRAQVDGPVRASLRVGGKTQALVNGSD CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCEEEEECCCCEEEEEEECCCEEEEECCCC VTLQSLRPQQAVALKNAPLVFVGYGISAPERQWDDYKGVDLRGKIAVVLINDADFESPQP EEHHHCCCHHHHEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC GAFDGKAVTYYGRWTYKYEEAARRGAAGVLIVHETAPAAYGWGTVQSSGMSPLFDIERSD CCCCCCEEEEEEEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCC ADARAQHVPVRGWMQRALAVSLFKQAGLDFEQAKARAQQRDFAPVALGDATLSVDFKLKR CCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCEEEEEEEEECC ERVVTHNVVAKLTGSQHPDETVIFSAHWDAFGIGKADASGDAIRRGAVDNATGVASVLEL HHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCCCHHHHCCCCCCHHHHHHHHHH ARVFAAGPKPQRTLYFIALTAEEKGLLGANYYAAHPLAPLDKTVAVLNMEMFSPDGPTRD HHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCHH IASWGRGRVSLEDDLETAAKARGRSYSPDPNLEAGFFYRADHFAFARMGVPAITAGPGLD HHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHCCCCEEECCCCCC MLDGGVAAGKALRETYFADCYHQPCDRWTPQWDASGHAADTTLVYDVGVALANGRQWPSW HHCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCCC QDGSEFKAIRAKSDAVRK CCCCHHHEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA