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The map label for this gene is yedA [H]

Identifier: 21244720

GI number: 21244720

Start: 4693963

End: 4694859

Strand: Reverse

Name: yedA [H]

Synonym: XAC4003

Alternate gene names: 21244720

Gene position: 4694859-4693963 (Counterclockwise)

Preceding gene: 77748750

Following gene: 21244719

Centisome position: 90.71

GC content: 69.01

Gene sequence:

>897_bases
ATGTCTTCCTCTCACGATGCTGCCGCGCCTGCGCGCAGCGGGTTAGTCGTTCTCGCCTTGTTGCTGGTCTACGTGGTGTG
GGGCTCGACCTATCTGGCGATCCGATTCGCGCTGGAAGGTGGCGCGCAGCCGCTGACGATGGTGTCCGGCGCGCGTTTCA
TCGTTGCTGGTAGCGTGCTCTACAGCGCGCTGCGCTGGCGCGGCGTGGCGGCGCCAACGCGTGCGCAGTGGAAGAACGTG
GCGCTGATGGGGGCGGCGTTGCTGCTGCTCGGCAACGGCATGGTGGTGCTGGCCGAGCGCAGCGTGTCGTCCGGGCTGGC
CGCCACCGCGGTGGCCTCGGTGCCGTTGTGGATGGCCTTGTTTGGCGCCTTGCGCGGGCAGCATGCCAGCGGCGGCGAAT
GGCTGGGCATCGTGATCGGCTTTCTGGGCGTGGTGTGGCTCAACGCCGGCAGCAGCCTGACCGCGACGCCGGGTGGCCTG
GTGTTGCTGCTGATCGCACCGATCGGCTGGGCATTCGGCTCGGTGTGGTCGCGCGGGCGCGATCTGCCTTCGCCGTTCAT
GACCGCCGCCGGACAGATGCTGTGCGGCGGCGTGCTGCTGGTCAGTACCGGCCTGCTGATCGGCGAGCGCCCGCAGGTGT
GGCCGAGTCCGCAAGGACTGCTGGCGGTGGCGTACCTGTGCGTGTTCGGCTCGATCGTGGCGTTTACCGCCTACGTGTGG
CTGCTGCATCACGTGCGCCCTGCGCTCGCCGGTAGCTACGCCTACGTCAACCCGGTGATTGCGGTCAGCCTGGGCGCCTG
GCTCGGCCACGAGCGCTTCAGCGCGCAGGACATCGGTGCGATGGCGGTGATCCTGGCCGGCGTGCTGGTGGTCACCTTCG
CCAAGGCGCGGCGATGA

Upstream 100 bases:

>100_bases
TCGGATGCGGTGGGAAGTGCACCATAGCGCGACCGAGGTGCGGCGTGGGCTTTGGCATGTGCTCTAGAATTGAAGGTTCC
GCTGCACTGGCACTGTTCCG

Downstream 100 bases:

>100_bases
GCGCGGTGTCGTCGCAGGAAGCGCGCCGCGGATTGTTGATCACCGCCTCCACCTTCGTGCTGTGGGGGCTGGTGCCGGTG
TACTGGCATCTGCTCAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVLYSALRWRGVAAPTRAQWKNV
ALMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMALFGALRGQHASGGEWLGIVIGFLGVVWLNAGSSLTATPGGL
VLLLIAPIGWAFGSVWSRGRDLPSPFMTAAGQMLCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVW
LLHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR

Sequences:

>Translated_298_residues
MSSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVLYSALRWRGVAAPTRAQWKNV
ALMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMALFGALRGQHASGGEWLGIVIGFLGVVWLNAGSSLTATPGGL
VLLLIAPIGWAFGSVWSRGRDLPSPFMTAAGQMLCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVW
LLHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR
>Mature_297_residues
SSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVLYSALRWRGVAAPTRAQWKNVA
LMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMALFGALRGQHASGGEWLGIVIGFLGVVWLNAGSSLTATPGGLV
LLLIAPIGWAFGSVWSRGRDLPSPFMTAAGQMLCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVWL
LHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=278, Percent_Identity=45.6834532374101, Blast_Score=188, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30946; Mature: 30815

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVL
CCCCCCCCCCHHCCHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCHHHCCCHHHHHHHHH
YSALRWRGVAAPTRAQWKNVALMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMAL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHH
FGALRGQHASGGEWLGIVIGFLGVVWLNAGSSLTATPGGLVLLLIAPIGWAFGSVWSRGR
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCC
DLPSPFMTAAGQMLCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVW
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSHDAAAPARSGLVVLALLLVYVVWGSTYLAIRFALEGGAQPLTMVSGARFIVAGSVL
CCCCCCCCCHHCCHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCHHHCCCHHHHHHHHH
YSALRWRGVAAPTRAQWKNVALMGAALLLLGNGMVVLAERSVSSGLAATAVASVPLWMAL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHH
FGALRGQHASGGEWLGIVIGFLGVVWLNAGSSLTATPGGLVLLLIAPIGWAFGSVWSRGR
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCC
DLPSPFMTAAGQMLCGGVLLVSTGLLIGERPQVWPSPQGLLAVAYLCVFGSIVAFTAYVW
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLHHVRPALAGSYAYVNPVIAVSLGAWLGHERFSAQDIGAMAVILAGVLVVTFAKARR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]