| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is aspG [C]
Identifier: 77748696
GI number: 77748696
Start: 3630311
End: 3631375
Strand: Reverse
Name: aspG [C]
Synonym: XAC3092
Alternate gene names: 77748696
Gene position: 3631375-3630311 (Counterclockwise)
Preceding gene: 21243820
Following gene: 21243818
Centisome position: 70.16
GC content: 65.16
Gene sequence:
>1065_bases ATGCTTCAACGCCGTCACTTCCTCAAGAGCGCCACGCTAGGCGCGATTGCGTCCGGGTTGGCCGGCTGGGGCGCCCGCGC GCAAGCCGCGGCAGGCGCCACGCCAGGCATGCGGCCGATGGCGGTGCCGCGTGGCGCGGCGCGGGTGATCTCCACCTGGG ATTTCGGCGTCGCCGCCAATCAGGAAGCCTGGAAGATTCTCAGCAGCGGCGGTATTGCGCTGGATGCGGTGGAGGCCGGC GTGCGTGTGCCGGAAGCGGACCCGAACAATCCCACCGTCGGCCTGGGCGGTTATCCGGACCGCGATGGCCGGGTAACGCT GGACGCCTGCATCATGGATCACCTGGGCAATTGTGGCGCGGTGGCATCGCTGGAAGACGTGGTGCACGCCATTTCGGTGG CACGTGCGGTGATGGAGAAAACCCCGCACGTGATGTTGGTGGGCGACGGCGCGCGTCAATTCGCCTTCGAACAGGGTTTT CCGAAAACCAAGCTGTTGACTCCAAGCTCGGAAGCGGCCTGGAAAGAGTGGTTGAAGAGCTCCAAGTATTCGCCCGAAGC CAATGTCGAAAATCGCGCCTGGCGAGATGCCAAGTTGCCCGGCGGCAAGGACAATCACGACACCATCGGCATGCTGGCGC TGGATACGCACGGCAATCTATCCGGTGCATGCACCACCAGCGGCATGGCGTGGAAGATGCACGGCCGCGTGGGCGACAGC CCGATCATCGGCGCGGGCCTGTACGTGGACAACGACGTGGGCGGGGCGACCTCGACGGGTGTGGGCGAGGAGGTGATCCG CAACGTCGGCAGTTTTGCGGTGGTGGAAATGATGCGGCAGGGCAAATCGCCCGCCGATGCCTGCCGCGAGGTGGTGATGC GGCTGATCCGTCGCAAGCCGGAGCTGACGCGCACATTGCAGGTCGGCTTTCTGGCAATGAACAAGCGCGGCGAAGTGGGA GCGTTCGCGATCCAGAAGGGCTTCAGTTACGCGGTGTGCGACGCGCAGCGGCAGGATCTGCTGGTGCCTGGCGAGAGCCA TTACACCAGCGAGCCGGCAGCATGA
Upstream 100 bases:
>100_bases ACAACGCCGCAATAAGGTTTATCCGCACGCCACGCTGTCGCATGATGGAAGGCTGGTACCGCACTGCGCGGCCGCTCGTT TCCGTCATGGAGTCATCCGC
Downstream 100 bases:
>100_bases GCGCGGTGGGATTGGAAGTGGCTGCCGATTCGGTGGCCTCGGCATTGGCCGCGCAAGCAGGCGGTGCGATGCGCGTGGAG CTGTGCGGCGGGCTGGATGG
Product: asparaginase
Products: NA
Alternate protein names: Aspartylglucosaminidase; AGA; Glycosylasparaginase; N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLQRRHFLKSATLGAIASGLAGWGARAQAAAGATPGMRPMAVPRGAARVISTWDFGVAANQEAWKILSSGGIALDAVEAG VRVPEADPNNPTVGLGGYPDRDGRVTLDACIMDHLGNCGAVASLEDVVHAISVARAVMEKTPHVMLVGDGARQFAFEQGF PKTKLLTPSSEAAWKEWLKSSKYSPEANVENRAWRDAKLPGGKDNHDTIGMLALDTHGNLSGACTTSGMAWKMHGRVGDS PIIGAGLYVDNDVGGATSTGVGEEVIRNVGSFAVVEMMRQGKSPADACREVVMRLIRRKPELTRTLQVGFLAMNKRGEVG AFAIQKGFSYAVCDAQRQDLLVPGESHYTSEPAA
Sequences:
>Translated_354_residues MLQRRHFLKSATLGAIASGLAGWGARAQAAAGATPGMRPMAVPRGAARVISTWDFGVAANQEAWKILSSGGIALDAVEAG VRVPEADPNNPTVGLGGYPDRDGRVTLDACIMDHLGNCGAVASLEDVVHAISVARAVMEKTPHVMLVGDGARQFAFEQGF PKTKLLTPSSEAAWKEWLKSSKYSPEANVENRAWRDAKLPGGKDNHDTIGMLALDTHGNLSGACTTSGMAWKMHGRVGDS PIIGAGLYVDNDVGGATSTGVGEEVIRNVGSFAVVEMMRQGKSPADACREVVMRLIRRKPELTRTLQVGFLAMNKRGEVG AFAIQKGFSYAVCDAQRQDLLVPGESHYTSEPAA >Mature_354_residues MLQRRHFLKSATLGAIASGLAGWGARAQAAAGATPGMRPMAVPRGAARVISTWDFGVAANQEAWKILSSGGIALDAVEAG VRVPEADPNNPTVGLGGYPDRDGRVTLDACIMDHLGNCGAVASLEDVVHAISVARAVMEKTPHVMLVGDGARQFAFEQGF PKTKLLTPSSEAAWKEWLKSSKYSPEANVENRAWRDAKLPGGKDNHDTIGMLALDTHGNLSGACTTSGMAWKMHGRVGDS PIIGAGLYVDNDVGGATSTGVGEEVIRNVGSFAVVEMMRQGKSPADACREVVMRLIRRKPELTRTLQVGFLAMNKRGEVG AFAIQKGFSYAVCDAQRQDLLVPGESHYTSEPAA
Specific function: Cleaves the GlcNAc-Asn bond which joins oligosaccharides to the peptide of asparagine-linked glycoproteins. Requires that the glycosylated asparagine moiety is not substituted on its N- (R1) and C- (R2) terminus [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI285002251, Length=319, Percent_Identity=36.6771159874608, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI285002253, Length=319, Percent_Identity=34.7962382445141, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI145275202, Length=229, Percent_Identity=37.9912663755458, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI145275200, Length=229, Percent_Identity=37.9912663755458, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI98991769, Length=235, Percent_Identity=28.5106382978723, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1787050, Length=259, Percent_Identity=37.0656370656371, Blast_Score=137, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17569239, Length=302, Percent_Identity=34.4370860927152, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI221330102, Length=301, Percent_Identity=39.8671096345515, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI24652135, Length=301, Percent_Identity=39.8671096345515, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24655553, Length=300, Percent_Identity=34, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI24657358, Length=297, Percent_Identity=33.6700336700337, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI18921183, Length=252, Percent_Identity=34.9206349206349, Blast_Score=117, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 - InterPro: IPR006311 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.5.1.26 [H]
Molecular weight: Translated: 37453; Mature: 37453
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRRHFLKSATLGAIASGLAGWGARAQAAAGATPGMRPMAVPRGAARVISTWDFGVAAN CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCCC QEAWKILSSGGIALDAVEAGVRVPEADPNNPTVGLGGYPDRDGRVTLDACIMDHLGNCGA HHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHCCCCCC VASLEDVVHAISVARAVMEKTPHVMLVGDGARQFAFEQGFPKTKLLTPSSEAAWKEWLKS HHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCEEECCCCHHHHHHHHHH SKYSPEANVENRAWRDAKLPGGKDNHDTIGMLALDTHGNLSGACTTSGMAWKMHGRVGDS CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCEEEEECCCCCCC PIIGAGLYVDNDVGGATSTGVGEEVIRNVGSFAVVEMMRQGKSPADACREVVMRLIRRKP CEEEECEEEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ELTRTLQVGFLAMNKRGEVGAFAIQKGFSYAVCDAQRQDLLVPGESHYTSEPAA HHHHHHHHEEEEECCCCCCCHHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure MLQRRHFLKSATLGAIASGLAGWGARAQAAAGATPGMRPMAVPRGAARVISTWDFGVAAN CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCCC QEAWKILSSGGIALDAVEAGVRVPEADPNNPTVGLGGYPDRDGRVTLDACIMDHLGNCGA HHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHCCCCCC VASLEDVVHAISVARAVMEKTPHVMLVGDGARQFAFEQGFPKTKLLTPSSEAAWKEWLKS HHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCEEECCCCHHHHHHHHHH SKYSPEANVENRAWRDAKLPGGKDNHDTIGMLALDTHGNLSGACTTSGMAWKMHGRVGDS CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCEEEEECCCCCCC PIIGAGLYVDNDVGGATSTGVGEEVIRNVGSFAVVEMMRQGKSPADACREVVMRLIRRKP CEEEECEEEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ELTRTLQVGFLAMNKRGEVGAFAIQKGFSYAVCDAQRQDLLVPGESHYTSEPAA HHHHHHHHEEEEECCCCCCCHHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7840643; 8250923; 9541410 [H]