| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cutC [H]
Identifier: 21243818
GI number: 21243818
Start: 3629583
End: 3630380
Strand: Reverse
Name: cutC [H]
Synonym: XAC3091
Alternate gene names: 21243818
Gene position: 3630380-3629583 (Counterclockwise)
Preceding gene: 77748696
Following gene: 21243814
Centisome position: 70.14
GC content: 68.8
Gene sequence:
>798_bases GTGCGACGCGCAGCGGCAGGATCTGCTGGTGCCTGGCGAGAGCCATTACACCAGCGAGCCGGCAGCATGAGCGCGGTGGG ATTGGAAGTGGCTGCCGATTCGGTGGCCTCGGCATTGGCCGCGCAAGCAGGCGGTGCGATGCGCGTGGAGCTGTGCGGCG GGCTGGATGGCGGCGGGCTGACGCCGTCGTTCGGCACGTTGGCGGTGGTGCGCGAGCGTTTGCGGATTCCGCTGTATGTG CTGATTCGTCCGCGCGTGGGCGACTTCGTGTTCGACGCCGCCGAAGTCGAGGTGATGCGCCGCGATGTGGAGCAGTGCGT CCGGCTGGGATGCGATGGCGTGGTCCTTGGCGCGCTGGACCGGCATGGGCAGGTCGATCTGGCGACAATGCGCGTGTTGA TGCAGGCAGCAGGGTCGTTGGGGGTGACGTTTCATCGCGCGATCGATGTCAGTGCCGACCCGTCGCGCGTGCTGGAGGAT GCGATCGCGCTGGGGTGCGAGCGGGTGCTGACCTCGGGCGCACGTGCGAGTGCGCTGGAGGGCATCGACACCATCGCCGC GTTGGTGCGGCAGGCAGCCGGGCGCATCGGCATCATGCCCGGTGCCGGGCTTTCCGAGCACAACATCCGCGCCCTACGGC AGCACACCGGCGCCCACGAATTCCATGCGTCGGCGCGTGGCGTGATCGCCGCCCAGGTGCCGTCGCCGCACCCCTATATC CGCGATCTGGGCGGGGACTACCAGCGGACCGATACCGCGCGGGTACAACGGATGGTGGACGCGTTGCAGCAAGCGTGA
Upstream 100 bases:
>100_bases AGCCGGAGCTGACGCGCACATTGCAGGTCGGCTTTCTGGCAATGAACAAGCGCGGCGAAGTGGGAGCGTTCGCGATCCAG AAGGGCTTCAGTTACGCGGT
Downstream 100 bases:
>100_bases AACGCGCGCAACGCCCCGTTCGGCCGGGGATGCGCCGCCTGACTTGCGCAGGCACATGACGGCGATGCTCGATTGGCGAC GGCGCATCTCGTGTTTGCCC
Product: copper homeostasis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRRAAAGSAGAWREPLHQRAGSMSAVGLEVAADSVASALAAQAGGAMRVELCGGLDGGGLTPSFGTLAVVRERLRIPLYV LIRPRVGDFVFDAAEVEVMRRDVEQCVRLGCDGVVLGALDRHGQVDLATMRVLMQAAGSLGVTFHRAIDVSADPSRVLED AIALGCERVLTSGARASALEGIDTIAALVRQAAGRIGIMPGAGLSEHNIRALRQHTGAHEFHASARGVIAAQVPSPHPYI RDLGGDYQRTDTARVQRMVDALQQA
Sequences:
>Translated_265_residues MRRAAAGSAGAWREPLHQRAGSMSAVGLEVAADSVASALAAQAGGAMRVELCGGLDGGGLTPSFGTLAVVRERLRIPLYV LIRPRVGDFVFDAAEVEVMRRDVEQCVRLGCDGVVLGALDRHGQVDLATMRVLMQAAGSLGVTFHRAIDVSADPSRVLED AIALGCERVLTSGARASALEGIDTIAALVRQAAGRIGIMPGAGLSEHNIRALRQHTGAHEFHASARGVIAAQVPSPHPYI RDLGGDYQRTDTARVQRMVDALQQA >Mature_265_residues MRRAAAGSAGAWREPLHQRAGSMSAVGLEVAADSVASALAAQAGGAMRVELCGGLDGGGLTPSFGTLAVVRERLRIPLYV LIRPRVGDFVFDAAEVEVMRRDVEQCVRLGCDGVVLGALDRHGQVDLATMRVLMQAAGSLGVTFHRAIDVSADPSRVLED AIALGCERVLTSGARASALEGIDTIAALVRQAAGRIGIMPGAGLSEHNIRALRQHTGAHEFHASARGVIAAQVPSPHPYI RDLGGDYQRTDTARVQRMVDALQQA
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=226, Percent_Identity=46.0176991150442, Blast_Score=195, Evalue=3e-50, Organism=Escherichia coli, GI87081995, Length=198, Percent_Identity=44.4444444444444, Blast_Score=150, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17556905, Length=205, Percent_Identity=40.9756097560976, Blast_Score=154, Evalue=4e-38, Organism=Drosophila melanogaster, GI21355415, Length=212, Percent_Identity=39.1509433962264, Blast_Score=147, Evalue=9e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 27827; Mature: 27827
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAAAGSAGAWREPLHQRAGSMSAVGLEVAADSVASALAAQAGGAMRVELCGGLDGGGL CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC TPSFGTLAVVRERLRIPLYVLIRPRVGDFVFDAAEVEVMRRDVEQCVRLGCDGVVLGALD CCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC RHGQVDLATMRVLMQAAGSLGVTFHRAIDVSADPSRVLEDAIALGCERVLTSGARASALE CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH GIDTIAALVRQAAGRIGIMPGAGLSEHNIRALRQHTGAHEFHASARGVIAAQVPSPHPYI HHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCHHH RDLGGDYQRTDTARVQRMVDALQQA HHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRAAAGSAGAWREPLHQRAGSMSAVGLEVAADSVASALAAQAGGAMRVELCGGLDGGGL CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC TPSFGTLAVVRERLRIPLYVLIRPRVGDFVFDAAEVEVMRRDVEQCVRLGCDGVVLGALD CCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC RHGQVDLATMRVLMQAAGSLGVTFHRAIDVSADPSRVLEDAIALGCERVLTSGARASALE CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH GIDTIAALVRQAAGRIGIMPGAGLSEHNIRALRQHTGAHEFHASARGVIAAQVPSPHPYI HHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCHHH RDLGGDYQRTDTARVQRMVDALQQA HHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]