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The map label for this gene is yebA [H]

Identifier: 77748691

GI number: 77748691

Start: 3558161

End: 3559054

Strand: Direct

Name: yebA [H]

Synonym: XAC3041

Alternate gene names: 77748691

Gene position: 3558161-3559054 (Clockwise)

Preceding gene: 77748689

Following gene: 21243769

Centisome position: 68.75

GC content: 69.57

Gene sequence:

>894_bases
GTGTCTCGCACCGCCCTGCCCGCCCTGATCGCGGCATGCGTTTTGCTGCCGGCCTGGGTCCCTGCGGTACACGCGCAGCA
GCGTTGGCAGTGGCCTGCCGCCGCAACGCCTTCGTCCCAGACACCTGGCGCACCGTCCACGATGGCATCTTCAGGCAGTG
GCGCCTCGCTGCAACTGGAGTGGCAGGCACCGGTGTACCTGGCCTGGGTCACCAATCCGCTGGCCGGGCCTGCGCAACTG
CGCCTGAGCGCGCTGTCCAGCGAGGATTACCGCGCCGTGCCGCAGTTACCGCTGACGCTTGAGTTGGCCGCACATGAGCG
CCGCCTTGTGACCCGGCTGTATCCGGCCAGCAACCAGCGCACCCTGGGCGGTTTCGGGCTGACGCTCGAGGTGGTGCCGG
GCAATCCGGGGGCCGCCCCGCAGCCGGTGCGTTATCAATTGCCATTCCACAACGTGCCGGTGCAGGTGGCGCAGGGCTTT
GGCGGGCAGTTCAGCCATGTCGACCCGCCCAACTGGTATGCGGTGGACTTCGCCATGCCGCAGGGCACGCCGGTGCTCGC
AGCGCGCGAGGGCGTGGTCATGCAAGTGCAGCGCGATGTCCTCGACAGCACCCCGAACGACCCCACCGCTGGCGGCGGCA
ACCTGGTGCGCGTCCTGCATGCCGACGGCAGCATGGCCCTGTACGCCCACTTGGCGCCCAATGGCGTGGCCGTGCGACCG
GGCCAGGCGGTGCGCACCGGCGAGCGGCTTGGCACCTCGGGCAATACCGGCTTCAGCACCGCGCCGCACCTGCATTTCGC
GATCCAGCGCAATGCCGGCATGCAGTTGCTCTCGCTGCCGTTCCGCATGCTCGGCCCGCAGGGCGAACTGCATTTTCCCT
CGCCGGCGCCCTGA

Upstream 100 bases:

>100_bases
CATGCGGATGGAAAGATATATTTTCATCCGATACCACTACGGTCGACGCGGGGCCGCATACTTGCGCCCCCTTGCTCGAG
TCGATGGCGTGCCCTACCAA

Downstream 100 bases:

>100_bases
CCGTCGCCGGGCCGACAGACGTGCGCCGCCCGAATCGCACGGCGCCCGCGCCTTCCACAAAAGCGTGCCGCAGCGAAGCC
GCTATAATCGTCGGCTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSRTALPALIAACVLLPAWVPAVHAQQRWQWPAAATPSSQTPGAPSTMASSGSGASLQLEWQAPVYLAWVTNPLAGPAQL
RLSALSSEDYRAVPQLPLTLELAAHERRLVTRLYPASNQRTLGGFGLTLEVVPGNPGAAPQPVRYQLPFHNVPVQVAQGF
GGQFSHVDPPNWYAVDFAMPQGTPVLAAREGVVMQVQRDVLDSTPNDPTAGGGNLVRVLHADGSMALYAHLAPNGVAVRP
GQAVRTGERLGTSGNTGFSTAPHLHFAIQRNAGMQLLSLPFRMLGPQGELHFPSPAP

Sequences:

>Translated_297_residues
MSRTALPALIAACVLLPAWVPAVHAQQRWQWPAAATPSSQTPGAPSTMASSGSGASLQLEWQAPVYLAWVTNPLAGPAQL
RLSALSSEDYRAVPQLPLTLELAAHERRLVTRLYPASNQRTLGGFGLTLEVVPGNPGAAPQPVRYQLPFHNVPVQVAQGF
GGQFSHVDPPNWYAVDFAMPQGTPVLAAREGVVMQVQRDVLDSTPNDPTAGGGNLVRVLHADGSMALYAHLAPNGVAVRP
GQAVRTGERLGTSGNTGFSTAPHLHFAIQRNAGMQLLSLPFRMLGPQGELHFPSPAP
>Mature_296_residues
SRTALPALIAACVLLPAWVPAVHAQQRWQWPAAATPSSQTPGAPSTMASSGSGASLQLEWQAPVYLAWVTNPLAGPAQLR
LSALSSEDYRAVPQLPLTLELAAHERRLVTRLYPASNQRTLGGFGLTLEVVPGNPGAAPQPVRYQLPFHNVPVQVAQGFG
GQFSHVDPPNWYAVDFAMPQGTPVLAAREGVVMQVQRDVLDSTPNDPTAGGGNLVRVLHADGSMALYAHLAPNGVAVRPG
QAVRTGERLGTSGNTGFSTAPHLHFAIQRNAGMQLLSLPFRMLGPQGELHFPSPAP

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=94, Percent_Identity=41.4893617021277, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 31433; Mature: 31302

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTALPALIAACVLLPAWVPAVHAQQRWQWPAAATPSSQTPGAPSTMASSGSGASLQLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEE
WQAPVYLAWVTNPLAGPAQLRLSALSSEDYRAVPQLPLTLELAAHERRLVTRLYPASNQR
ECCCEEEEEECCCCCCHHHEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHEECCCCCCE
TLGGFGLTLEVVPGNPGAAPQPVRYQLPFHNVPVQVAQGFGGQFSHVDPPNWYAVDFAMP
EECEEEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECC
QGTPVLAAREGVVMQVQRDVLDSTPNDPTAGGGNLVRVLHADGSMALYAHLAPNGVAVRP
CCCEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECC
GQAVRTGERLGTSGNTGFSTAPHLHFAIQRNAGMQLLSLPFRMLGPQGELHFPSPAP
CCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRTALPALIAACVLLPAWVPAVHAQQRWQWPAAATPSSQTPGAPSTMASSGSGASLQLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEE
WQAPVYLAWVTNPLAGPAQLRLSALSSEDYRAVPQLPLTLELAAHERRLVTRLYPASNQR
ECCCEEEEEECCCCCCHHHEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHEECCCCCCE
TLGGFGLTLEVVPGNPGAAPQPVRYQLPFHNVPVQVAQGFGGQFSHVDPPNWYAVDFAMP
EECEEEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECC
QGTPVLAAREGVVMQVQRDVLDSTPNDPTAGGGNLVRVLHADGSMALYAHLAPNGVAVRP
CCCEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECC
GQAVRTGERLGTSGNTGFSTAPHLHFAIQRNAGMQLLSLPFRMLGPQGELHFPSPAP
CCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]