| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is zraS [C]
Identifier: 77748575
GI number: 77748575
Start: 1470143
End: 1471306
Strand: Direct
Name: zraS [C]
Synonym: XAC1282
Alternate gene names: 77748575
Gene position: 1470143-1471306 (Clockwise)
Preceding gene: 77748574
Following gene: 21242037
Centisome position: 28.41
GC content: 62.89
Gene sequence:
>1164_bases ATGGATGCGGAAACGGCCGTCGACAGCGCAGGGCCGCTTTCTTACGACAGCCGGCAGTGTCAACTGTTGGTGCAGAGCGT GTCCGATCATGCGATCTACATGCTCGATATCGGTGGGCATATTCGCAGCTGGAACCCCGGCGGCGAGCGCATCAAGGGCT ACAGCGCAAGCGAGATATTAGGCACGCATTTCTCGCGGTTCTACCTGCCCGAGGATGCGCAACGCGACGAACCCAGCCGC AATCTGGAAATCGCCAAGCGGGAAGGGCGCTTCGCTGCCGAAGGTTGGCGCTTGCGCAAGGACGGCAGCCGGTTCTGGGC CAGCGTGGTGATCGAACCGGTGCTGGAATTCGGCGTGCTGGTGGGGTTTGCAAAAGTCACTCGCGATCTGACCGAGCGCC GTGAGGCGCAGCATTTGCTGCAACAGGCGCAGCAGGCGTTGCTGCAATCGCAGAAGGTCGAAGCCTTGGGTCGGTTGACG CTGGGCATGGCCCACGATTTCAACAACCTGCTCACGGTGATGGTGACCAGTCTGGATCTGATTGCGCTGCGCGCAGGCGA GGACGCGCGCACCCGCATGTTGATCGAAGTGGCGCAAACTGCGGTGGATCGCGGCACCTTGCTGACGCGGCAACTGCTCG CGTTCGCGCGCGGTCAACAACTGAACCCTGAGCGCCACCCGGTCAATGACATCGTGACGCGTTCGTTGGAACTGTTGCGG CGTGCCTGTCCGCCGGGTGTGAGCTTGTCGTTGCAGTTTGCCGACGCACTGCCGCATGTGCGCGTAGACCCCGGTCAGCT GGAGGCGGCGTTGCTCAATCTGGTCTTCAATAGTTGCGATGCGATGCCCTCTGGCGGCAGCATCGCGTTGCTCACTTCTG CTGCGCAGCGATCCGAACCGTCAAGCCCACAAGGCGTCCGTCGCCCATACGTCGCCCTTGCCGTACGCGACGACGGTCCG GGCATGTCCGCGCACGTTGCACAACGCGCCAGCGAGCCATTTTTCACCACCAAGGATGTCGGCAAGGGCTCCGGCCTGGG CTTGAGCCAGGTCTATGGCTTCGCATCCCAGTCCGGTGGCTTCGTCGAGCTTGAGACCGCACCTGGACGCGGCACTACCG TCACCGTGTTTCTCCCGGCCGTCGAGGAGGCCGAGCATGACTGA
Upstream 100 bases:
>100_bases CGCCGGAAATTTGACGCTTTTTGCTGCCGCGTTGGCTTGCACGCAGCCTTCACGCAGCTATCAATATGGTCCCGCGCTTT TCTGGGGGAATCATCGCGCG
Downstream 100 bases:
>100_bases ATCCCTTCGCCTGCTGATGGTGGAAGACCAAGAAGAACTGCGCGAATTGATCGGCGAAGCGCTGCGCGATGCCGGCATCA GCGTCGACACCGCCGATGAT
Product: two-component system sensor protein
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MDAETAVDSAGPLSYDSRQCQLLVQSVSDHAIYMLDIGGHIRSWNPGGERIKGYSASEILGTHFSRFYLPEDAQRDEPSR NLEIAKREGRFAAEGWRLRKDGSRFWASVVIEPVLEFGVLVGFAKVTRDLTERREAQHLLQQAQQALLQSQKVEALGRLT LGMAHDFNNLLTVMVTSLDLIALRAGEDARTRMLIEVAQTAVDRGTLLTRQLLAFARGQQLNPERHPVNDIVTRSLELLR RACPPGVSLSLQFADALPHVRVDPGQLEAALLNLVFNSCDAMPSGGSIALLTSAAQRSEPSSPQGVRRPYVALAVRDDGP GMSAHVAQRASEPFFTTKDVGKGSGLGLSQVYGFASQSGGFVELETAPGRGTTVTVFLPAVEEAEHD
Sequences:
>Translated_387_residues MDAETAVDSAGPLSYDSRQCQLLVQSVSDHAIYMLDIGGHIRSWNPGGERIKGYSASEILGTHFSRFYLPEDAQRDEPSR NLEIAKREGRFAAEGWRLRKDGSRFWASVVIEPVLEFGVLVGFAKVTRDLTERREAQHLLQQAQQALLQSQKVEALGRLT LGMAHDFNNLLTVMVTSLDLIALRAGEDARTRMLIEVAQTAVDRGTLLTRQLLAFARGQQLNPERHPVNDIVTRSLELLR RACPPGVSLSLQFADALPHVRVDPGQLEAALLNLVFNSCDAMPSGGSIALLTSAAQRSEPSSPQGVRRPYVALAVRDDGP GMSAHVAQRASEPFFTTKDVGKGSGLGLSQVYGFASQSGGFVELETAPGRGTTVTVFLPAVEEAEHD >Mature_387_residues MDAETAVDSAGPLSYDSRQCQLLVQSVSDHAIYMLDIGGHIRSWNPGGERIKGYSASEILGTHFSRFYLPEDAQRDEPSR NLEIAKREGRFAAEGWRLRKDGSRFWASVVIEPVLEFGVLVGFAKVTRDLTERREAQHLLQQAQQALLQSQKVEALGRLT LGMAHDFNNLLTVMVTSLDLIALRAGEDARTRMLIEVAQTAVDRGTLLTRQLLAFARGQQLNPERHPVNDIVTRSLELLR RACPPGVSLSLQFADALPHVRVDPGQLEAALLNLVFNSCDAMPSGGSIALLTSAAQRSEPSSPQGVRRPYVALAVRDDGP GMSAHVAQRASEPFFTTKDVGKGSGLGLSQVYGFASQSGGFVELETAPGRGTTVTVFLPAVEEAEHD
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=240, Percent_Identity=29.5833333333333, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788549, Length=370, Percent_Identity=26.4864864864865, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1790300, Length=361, Percent_Identity=27.1468144044321, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42097; Mature: 42097
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAETAVDSAGPLSYDSRQCQLLVQSVSDHAIYMLDIGGHIRSWNPGGERIKGYSASEIL CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHCCCCCHHHHH GTHFSRFYLPEDAQRDEPSRNLEIAKREGRFAAEGWRLRKDGSRFWASVVIEPVLEFGVL HHHHHHEECCCCCCCCCCCCCCHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH VGFAKVTRDLTERREAQHLLQQAQQALLQSQKVEALGRLTLGMAHDFNNLLTVMVTSLDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALRAGEDARTRMLIEVAQTAVDRGTLLTRQLLAFARGQQLNPERHPVNDIVTRSLELLR EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RACPPGVSLSLQFADALPHVRVDPGQLEAALLNLVFNSCDAMPSGGSIALLTSAAQRSEP HHCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCC SSPQGVRRPYVALAVRDDGPGMSAHVAQRASEPFFTTKDVGKGSGLGLSQVYGFASQSGG CCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEECCCCCCCCCCCHHHHHCCCCCCCC FVELETAPGRGTTVTVFLPAVEEAEHD EEEEECCCCCCCEEEEEECCHHCCCCC >Mature Secondary Structure MDAETAVDSAGPLSYDSRQCQLLVQSVSDHAIYMLDIGGHIRSWNPGGERIKGYSASEIL CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHCCCCCHHHHH GTHFSRFYLPEDAQRDEPSRNLEIAKREGRFAAEGWRLRKDGSRFWASVVIEPVLEFGVL HHHHHHEECCCCCCCCCCCCCCHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH VGFAKVTRDLTERREAQHLLQQAQQALLQSQKVEALGRLTLGMAHDFNNLLTVMVTSLDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALRAGEDARTRMLIEVAQTAVDRGTLLTRQLLAFARGQQLNPERHPVNDIVTRSLELLR EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RACPPGVSLSLQFADALPHVRVDPGQLEAALLNLVFNSCDAMPSGGSIALLTSAAQRSEP HHCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCC SSPQGVRRPYVALAVRDDGPGMSAHVAQRASEPFFTTKDVGKGSGLGLSQVYGFASQSGG CCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEECCCCCCCCCCCHHHHHCCCCCCCC FVELETAPGRGTTVTVFLPAVEEAEHD EEEEECCCCCCCEEEEEECCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA