Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is fyuA [H]

Identifier: 77748574

GI number: 77748574

Start: 1460452

End: 1462821

Strand: Direct

Name: fyuA [H]

Synonym: XAC1276

Alternate gene names: 77748574

Gene position: 1460452-1462821 (Clockwise)

Preceding gene: 21242027

Following gene: 77748575

Centisome position: 28.22

GC content: 64.3

Gene sequence:

>2370_bases
ATGCCGTTGTACTCGCCTGTCTTTTCGTTGCCGGTGTCCGCTATTGCACAGGTCGCTGCGCGCCGCCGCACCGCCTTGCA
GCGCACGCCGCTCGCGCGTGCCTGCGCGTGCCTGTTGCTAGCCTCGTTGGCGGCAACCGCGTCTGCGCAGCAAGCGCCGG
CGGCCCAGGGCGAAGCCAGCCCCACCGCGCTGGACACGGTCACCGTCACTGCCGAGCACCGCGAGCAGAACCTGCAGGAC
GTGCCGGTCTCGGTCGGCGTGGTGCAGGGCGCAGCGATGCGCGACTACACCGCCGGTGGCGACGACACGCTGCTGGCGCT
TTCCGGCCGCGTACCGGGCTTCTACGCCGAAACCACCACCGGGCGCATCTTCCCGCGCTTCTATATCCGTGGCCTGGGCA
ATATCGATTTCTACCTGGGTGCCTCGCAGCCGGTGTCCATCATCCAGGACGATGTGGTGCTGGAGCATGTCGTGCTCAAA
TCCAATCCGGTCTATGACGTGGACCAGGTCGAAGTGCTGCGCGGCCCGCAAGGCACGCTGTTCGGGCGCAACACCACCGC
CGGCATCGTCAAGTTCGATACGGTCAAGCCCAGCGACACCTACACCGGTCGCGTCAACGCCAGCTACGGCAGCTACAACA
CTCTCTCGCTGGATGGCGGCTTCGGTGGCCCCATCAACGATGTGCTGTCGTTCCGTGTGTCCGCGTTGTACCAGCACCGC
GACGATTGGGTGGACAACACCTTTGCCGGTAGCAGCGCCGACGGCACGCGCACGCCGCGCAAGGACGCGATGGGCGGTTA
CAACGACCGCAATGCGCGCTTGCAGGTCTCGCTCAAGCCCAACGATGCGTTCTCGCTGCTGGGCTCGGTGCACACGCGCG
ATTACGACGGCACGTCCACCTTGTTCCTGCGCAACGCGATCACGCGTGGCAGCGACAAGGTGGACGTGCCGCGCGACCGC
GTGGCCTACGACGAAGGGCACGACAACCCGCAGGCGTATCAAACCGATGGCGGCTCGCTCAAGGCGATTTACGACTTCGG
TGGCGTGTCGCTGACCTCCATCACCGCCTACGAAACCACTTCCGGCTACAGCCGTGGCGACACCGATGGCGGTGCTGCCG
CCAATTACCCGGTCAATGGCGTGCCGAACGGCTTTGGCCAGTCGATGGGGCAGATCCGCGACCTGGACCAGTACACGCAG
GAATTGCGCCTGGCCAGCGAAGGCGACGACGCCCTGCAGTGGCAGGTGGGCGCGTTCTATTTCGACGGCCGCGACATCAC
CGATTTCTATCAGCGTGCCTATTTCCTGCAGACCGCCGCGCGCAACCCGAACAACTGGGTGCGCCTGCGCAATACCAATA
CCTCGTGGGCCGGCTTCGGTCAGCTCAGCTACAAGGCGACCGACGCGCTGACGCTGACTGCCGGCATCCGCCAGACCAAG
GACACCAAGCAAACCCGCCTGCTCAAGACCGCCGATACCGCGGCCGGTGTGGTGACCTACCGCGGCCGGCGCGATGTGCG
CATGTCCGATACCCAGCCCAGCTGGGATCTGAGCGCGATGTATGAGATCGATCCGCAGCTGAGTGTGTATGCACGCGTTG
CGCGCGGCTTCCGCGGCCCCACCATCCAGGGCCGCAGCGCAGTGTTCAATTCCGATTTCACCACTGCCGATTCGGAAACC
ATCCTGTCCTGGGAAGCCGGCATCAAGAGCAGCCTGTTCGAGAACCGTCTGCGCCTGAATGTCAGCGGCTTCACCTACAC
GGTCGACGATATCCAGCTCAACGGCAACGACTCGGACGGCAATGGCGTGCTGTTCAATGCCGACAAGGCCAAGGCCTACG
GCATGGAAGCGGATCTGGACTGGCGCCCGATCTCCAACCTGTCGATCACCGCCGGCCTGAGCCTGTTGCATAGCGAAATC
CACGACGAGCGCGTCTACGCCCAGGTCTGCGCGCTCAATGGCGTGGTGGTGTGCACGGTCAACGACCCGACCATTCGCGT
AGGTGCCAACACCTTCGCCCAGATCGACGGCAACCCGCTGCCCAACGCGCCCAAGTACAACCTCAACCTGGCCGCGCGCT
ACGACATCCCGGTCGGCAACGACGGCGCGTTCTTCGTGTCCACCGACTGGAACAAGCAGGGCCAGACCAGCTTCGTGCTG
TACGACTCCACCGAATTCCGCTCCGACGGCAATTTCGAAGGTGGCCTCAAGCTGGGCTACACCGGTGGCTACGGTGCGTG
GGAAGTGGCGGCGTTCGCGCGCAACATCACCAACGAAAAGAACCTCAAGGGCGTGATCGAAAACTACATGGCCGCGGTCT
ACAACGAGCCGCGTGTCGTCGGGGTGTCGGTCAACGTCAACTGGCAGTGA

Upstream 100 bases:

>100_bases
CGGCGCCACGCGGCGCCACGCGGCGCCGCCAGCAGGCATGCCATGCCAAATGGCTTCGACGCTGTGTCATCACCTCGTAT
CACTTCTAGGATCAGTCCGC

Downstream 100 bases:

>100_bases
CGGGTTGATCGCCTGATTGCAGTCACTGCGGCGTCTGCGCCGCAGTGATGTTTCCTGCAGGTGGGCAGGCCAGCTGCGTG
CATGCGCAGCTGACCTTCGT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: IPR65; IRPC [H]

Number of amino acids: Translated: 789; Mature: 788

Protein sequence:

>789_residues
MPLYSPVFSLPVSAIAQVAARRRTALQRTPLARACACLLLASLAATASAQQAPAAQGEASPTALDTVTVTAEHREQNLQD
VPVSVGVVQGAAMRDYTAGGDDTLLALSGRVPGFYAETTTGRIFPRFYIRGLGNIDFYLGASQPVSIIQDDVVLEHVVLK
SNPVYDVDQVEVLRGPQGTLFGRNTTAGIVKFDTVKPSDTYTGRVNASYGSYNTLSLDGGFGGPINDVLSFRVSALYQHR
DDWVDNTFAGSSADGTRTPRKDAMGGYNDRNARLQVSLKPNDAFSLLGSVHTRDYDGTSTLFLRNAITRGSDKVDVPRDR
VAYDEGHDNPQAYQTDGGSLKAIYDFGGVSLTSITAYETTSGYSRGDTDGGAAANYPVNGVPNGFGQSMGQIRDLDQYTQ
ELRLASEGDDALQWQVGAFYFDGRDITDFYQRAYFLQTAARNPNNWVRLRNTNTSWAGFGQLSYKATDALTLTAGIRQTK
DTKQTRLLKTADTAAGVVTYRGRRDVRMSDTQPSWDLSAMYEIDPQLSVYARVARGFRGPTIQGRSAVFNSDFTTADSET
ILSWEAGIKSSLFENRLRLNVSGFTYTVDDIQLNGNDSDGNGVLFNADKAKAYGMEADLDWRPISNLSITAGLSLLHSEI
HDERVYAQVCALNGVVVCTVNDPTIRVGANTFAQIDGNPLPNAPKYNLNLAARYDIPVGNDGAFFVSTDWNKQGQTSFVL
YDSTEFRSDGNFEGGLKLGYTGGYGAWEVAAFARNITNEKNLKGVIENYMAAVYNEPRVVGVSVNVNWQ

Sequences:

>Translated_789_residues
MPLYSPVFSLPVSAIAQVAARRRTALQRTPLARACACLLLASLAATASAQQAPAAQGEASPTALDTVTVTAEHREQNLQD
VPVSVGVVQGAAMRDYTAGGDDTLLALSGRVPGFYAETTTGRIFPRFYIRGLGNIDFYLGASQPVSIIQDDVVLEHVVLK
SNPVYDVDQVEVLRGPQGTLFGRNTTAGIVKFDTVKPSDTYTGRVNASYGSYNTLSLDGGFGGPINDVLSFRVSALYQHR
DDWVDNTFAGSSADGTRTPRKDAMGGYNDRNARLQVSLKPNDAFSLLGSVHTRDYDGTSTLFLRNAITRGSDKVDVPRDR
VAYDEGHDNPQAYQTDGGSLKAIYDFGGVSLTSITAYETTSGYSRGDTDGGAAANYPVNGVPNGFGQSMGQIRDLDQYTQ
ELRLASEGDDALQWQVGAFYFDGRDITDFYQRAYFLQTAARNPNNWVRLRNTNTSWAGFGQLSYKATDALTLTAGIRQTK
DTKQTRLLKTADTAAGVVTYRGRRDVRMSDTQPSWDLSAMYEIDPQLSVYARVARGFRGPTIQGRSAVFNSDFTTADSET
ILSWEAGIKSSLFENRLRLNVSGFTYTVDDIQLNGNDSDGNGVLFNADKAKAYGMEADLDWRPISNLSITAGLSLLHSEI
HDERVYAQVCALNGVVVCTVNDPTIRVGANTFAQIDGNPLPNAPKYNLNLAARYDIPVGNDGAFFVSTDWNKQGQTSFVL
YDSTEFRSDGNFEGGLKLGYTGGYGAWEVAAFARNITNEKNLKGVIENYMAAVYNEPRVVGVSVNVNWQ
>Mature_788_residues
PLYSPVFSLPVSAIAQVAARRRTALQRTPLARACACLLLASLAATASAQQAPAAQGEASPTALDTVTVTAEHREQNLQDV
PVSVGVVQGAAMRDYTAGGDDTLLALSGRVPGFYAETTTGRIFPRFYIRGLGNIDFYLGASQPVSIIQDDVVLEHVVLKS
NPVYDVDQVEVLRGPQGTLFGRNTTAGIVKFDTVKPSDTYTGRVNASYGSYNTLSLDGGFGGPINDVLSFRVSALYQHRD
DWVDNTFAGSSADGTRTPRKDAMGGYNDRNARLQVSLKPNDAFSLLGSVHTRDYDGTSTLFLRNAITRGSDKVDVPRDRV
AYDEGHDNPQAYQTDGGSLKAIYDFGGVSLTSITAYETTSGYSRGDTDGGAAANYPVNGVPNGFGQSMGQIRDLDQYTQE
LRLASEGDDALQWQVGAFYFDGRDITDFYQRAYFLQTAARNPNNWVRLRNTNTSWAGFGQLSYKATDALTLTAGIRQTKD
TKQTRLLKTADTAAGVVTYRGRRDVRMSDTQPSWDLSAMYEIDPQLSVYARVARGFRGPTIQGRSAVFNSDFTTADSETI
LSWEAGIKSSLFENRLRLNVSGFTYTVDDIQLNGNDSDGNGVLFNADKAKAYGMEADLDWRPISNLSITAGLSLLHSEIH
DERVYAQVCALNGVVVCTVNDPTIRVGANTFAQIDGNPLPNAPKYNLNLAARYDIPVGNDGAFFVSTDWNKQGQTSFVLY
DSTEFRSDGNFEGGLKLGYTGGYGAWEVAAFARNITNEKNLKGVIENYMAAVYNEPRVVGVSVNVNWQ

Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 85774; Mature: 85643

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYSPVFSLPVSAIAQVAARRRTALQRTPLARACACLLLASLAATASAQQAPAAQGEAS
CCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCC
PTALDTVTVTAEHREQNLQDVPVSVGVVQGAAMRDYTAGGDDTLLALSGRVPGFYAETTT
CCEEEEEEEEEHHHHCCCCCCCEEEEEECCCEEECCCCCCCCEEEEEECCCCCEEEECCC
GRIFPRFYIRGLGNIDFYLGASQPVSIIQDDVVLEHVVLKSNPVYDVDQVEVLRGPQGTL
CCCCHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHEEECCCCCE
FGRNTTAGIVKFDTVKPSDTYTGRVNASYGSYNTLSLDGGFGGPINDVLSFRVSALYQHR
EECCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
DDWVDNTFAGSSADGTRTPRKDAMGGYNDRNARLQVSLKPNDAFSLLGSVHTRDYDGTST
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEE
LFLRNAITRGSDKVDVPRDRVAYDEGHDNPQAYQTDGGSLKAIYDFGGVSLTSITAYETT
EEEEHHHHCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEEEEEEECC
SGYSRGDTDGGAAANYPVNGVPNGFGQSMGQIRDLDQYTQELRLASEGDDALQWQVGAFY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEE
FDGRDITDFYQRAYFLQTAARNPNNWVRLRNTNTSWAGFGQLSYKATDALTLTAGIRQTK
ECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCEEEEECCCEEEEECCCCCCC
DTKQTRLLKTADTAAGVVTYRGRRDVRMSDTQPSWDLSAMYEIDPQLSVYARVARGFRGP
CHHHHHEEEECCCCCCEEEECCCCCCEECCCCCCCCCEEEEEECCCHHHHHHHHCCCCCC
TIQGRSAVFNSDFTTADSETILSWEAGIKSSLFENRLRLNVSGFTYTVDDIQLNGNDSDG
CCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHCCCEEEEECCEEEEEEEEEECCCCCCC
NGVLFNADKAKAYGMEADLDWRPISNLSITAGLSLLHSEIHDERVYAQVCALNGVVVCTV
CEEEEECCCCHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
NDPTIRVGANTFAQIDGNPLPNAPKYNLNLAARYDIPVGNDGAFFVSTDWNKQGQTSFVL
CCCEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEE
YDSTEFRSDGNFEGGLKLGYTGGYGAWEVAAFARNITNEKNLKGVIENYMAAVYNEPRVV
EECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEE
GVSVNVNWQ
EEEEEEECC
>Mature Secondary Structure 
PLYSPVFSLPVSAIAQVAARRRTALQRTPLARACACLLLASLAATASAQQAPAAQGEAS
CCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCC
PTALDTVTVTAEHREQNLQDVPVSVGVVQGAAMRDYTAGGDDTLLALSGRVPGFYAETTT
CCEEEEEEEEEHHHHCCCCCCCEEEEEECCCEEECCCCCCCCEEEEEECCCCCEEEECCC
GRIFPRFYIRGLGNIDFYLGASQPVSIIQDDVVLEHVVLKSNPVYDVDQVEVLRGPQGTL
CCCCHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHEEECCCCCE
FGRNTTAGIVKFDTVKPSDTYTGRVNASYGSYNTLSLDGGFGGPINDVLSFRVSALYQHR
EECCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
DDWVDNTFAGSSADGTRTPRKDAMGGYNDRNARLQVSLKPNDAFSLLGSVHTRDYDGTST
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEE
LFLRNAITRGSDKVDVPRDRVAYDEGHDNPQAYQTDGGSLKAIYDFGGVSLTSITAYETT
EEEEHHHHCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEEEEEEECC
SGYSRGDTDGGAAANYPVNGVPNGFGQSMGQIRDLDQYTQELRLASEGDDALQWQVGAFY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEE
FDGRDITDFYQRAYFLQTAARNPNNWVRLRNTNTSWAGFGQLSYKATDALTLTAGIRQTK
ECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCEEEEECCCEEEEECCCCCCC
DTKQTRLLKTADTAAGVVTYRGRRDVRMSDTQPSWDLSAMYEIDPQLSVYARVARGFRGP
CHHHHHEEEECCCCCCEEEECCCCCCEECCCCCCCCCEEEEEECCCHHHHHHHHCCCCCC
TIQGRSAVFNSDFTTADSETILSWEAGIKSSLFENRLRLNVSGFTYTVDDIQLNGNDSDG
CCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHCCCEEEEECCEEEEEEEEEECCCCCCC
NGVLFNADKAKAYGMEADLDWRPISNLSITAGLSLLHSEIHDERVYAQVCALNGVVVCTV
CEEEEECCCCHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
NDPTIRVGANTFAQIDGNPLPNAPKYNLNLAARYDIPVGNDGAFFVSTDWNKQGQTSFVL
CCCEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEE
YDSTEFRSDGNFEGGLKLGYTGGYGAWEVAAFARNITNEKNLKGVIENYMAAVYNEPRVV
EECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEE
GVSVNVNWQ
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA