| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is atoC [C]
Identifier: 21242037
GI number: 21242037
Start: 1471299
End: 1471667
Strand: Direct
Name: atoC [C]
Synonym: XAC1284
Alternate gene names: 21242037
Gene position: 1471299-1471667 (Clockwise)
Preceding gene: 77748575
Following gene: 21242040
Centisome position: 28.43
GC content: 63.14
Gene sequence:
>369_bases ATGACTGAATCCCTTCGCCTGCTGATGGTGGAAGACCAAGAAGAACTGCGCGAATTGATCGGCGAAGCGCTGCGCGATGC CGGCATCAGCGTCGACACCGCCGATGATGGTCACAGCGCGTTGCGCATGGTGCGCGACAGTGGCCCGTACGACGTGGTGT TCAGCGATATCCGCATGCCCAACGGCATGTCGGGCATCGAACTGAGCGAGCAGGTGGCGCAACTGCTGCCGCAGGCGCGC GTGATTCTGGCCTCGGGGTTTGCCAAGGCGCAGTTGCCGCCGTTGCCGGCGCAGGTCGATTTCCTGCCCAAACCGTACCG CCTGCGTCAACTCATCGACATGCTCAAGGCCACCCCAGCCAACGCGTAG
Upstream 100 bases:
>100_bases GGCTTCGCATCCCAGTCCGGTGGCTTCGTCGAGCTTGAGACCGCACCTGGACGCGGCACTACCGTCACCGTGTTTCTCCC GGCCGTCGAGGAGGCCGAGC
Downstream 100 bases:
>100_bases ACGTTGGCTGGGCGTGCGGCCTCAACGGCTCTGGTAGTACACCTTGTCGATGGCGATCTCCACCGGTGCAGCCGGTGGAT CGGCCACCAGCGTGAAGGGC
Product: two-component system regulatory protein
Products: NA
Alternate protein names: Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Response Regulator Receiver; PAS/PAC Sensor Hybrid Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Response Regulator; Two-Component System Regulatory Protein; Chemotaxis Response Regulator; Two-Component System Response Regulator; Sensor Histidine Kinase/Response Regulator; Response Regulator Receiver Domain; Sensory Transduction Protein Kinase; Two Component; Two Component Sensor Kinase/Response Regulator Hybrid; Signal Transduction Histidine Kinase; Sensor Histidine Kinase/Response Regulator CckA; PAS/PAC Sensor Protein
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTESLRLLMVEDQEELRELIGEALRDAGISVDTADDGHSALRMVRDSGPYDVVFSDIRMPNGMSGIELSEQVAQLLPQAR VILASGFAKAQLPPLPAQVDFLPKPYRLRQLIDMLKATPANA
Sequences:
>Translated_122_residues MTESLRLLMVEDQEELRELIGEALRDAGISVDTADDGHSALRMVRDSGPYDVVFSDIRMPNGMSGIELSEQVAQLLPQAR VILASGFAKAQLPPLPAQVDFLPKPYRLRQLIDMLKATPANA >Mature_121_residues TESLRLLMVEDQEELRELIGEALRDAGISVDTADDGHSALRMVRDSGPYDVVFSDIRMPNGMSGIELSEQVAQLLPQARV ILASGFAKAQLPPLPAQVDFLPKPYRLRQLIDMLKATPANA
Specific function: Member Of The Two-Component Regulatory System Atos/Atoc Involved In The Transcriptional Regulation Of The Ato Genes For Acetoacetate Metabolism. Also An Inhibitor Of Polyamine Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13403; Mature: 13271
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESLRLLMVEDQEELRELIGEALRDAGISVDTADDGHSALRMVRDSGPYDVVFSDIRMP CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCC NGMSGIELSEQVAQLLPQARVILASGFAKAQLPPLPAQVDFLPKPYRLRQLIDMLKATPA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC NA CC >Mature Secondary Structure TESLRLLMVEDQEELRELIGEALRDAGISVDTADDGHSALRMVRDSGPYDVVFSDIRMP CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCC NGMSGIELSEQVAQLLPQARVILASGFAKAQLPPLPAQVDFLPKPYRLRQLIDMLKATPA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC NA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA