| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ltaE [H]
Identifier: 77748529
GI number: 77748529
Start: 567785
End: 568846
Strand: Direct
Name: ltaE [H]
Synonym: XAC0477
Alternate gene names: 77748529
Gene position: 567785-568846 (Clockwise)
Preceding gene: 21241249
Following gene: 21241251
Centisome position: 10.97
GC content: 64.69
Gene sequence:
>1062_bases ATGGACGGGCAGGGTAGCGCTACGCGCATCAGCTTTCGCAACGACTACAGCGAAGGCGCGCATCCGCGGCTGTTGCAGGC GTTGGCGCAGGCCAGCGCCGAGCAGCATGCCGGCTATGGCACCGATCGGCACACAGCGCGTGCGGTTGCGTTGATCCGCA CCGCAGTCGCGCAGCCGCAGGCCGACGTGCATCTGCTGGTCGGCGGCACGCAGACCAATCTGATTGCGATCAGCGCGTTC TTGCGCCCGCATCAGGCAGTCATCGCGGTGGACGCGGCGCATATCGCCACGCACGAGACCGGCGCCATCGAAGCGACCGG CCACAAGGTGCTCACCGTGCCGGCGCTGCACGACAAGCTGACGCCTGCGCTGATTCAGCCGGTGCTGGCTGTGCACAGCA ACGAACACATGGTGCAGCCGCGTCTGGTCTACATTTCCAACAGCACCGAAAGCGGCACCATCTATACGCGCGCCGAACTC GATGCGTTGTCGCGGTTTTGTCGCGCGAACGATTTGCTGCTGTACCTGGATGGCGCGCGTCTGGGTGCGGCGCTGACCGC CGACGGCAACGATCTGGATCTGCCGGCCATTGCCACGCTGACCGACGCGTTCTATATCGGTGGCACCAAGAATGGTGCGC TGCTCGGCGAAGCGCTGGTCATCGTCAATCCCGCCCTGCAGGCGGATTTGCGTTATCTGATCAAGCAGCGCGGCGCGCTA CTGGCCAAGGGCATGGTGGTTGGTGCGCAATTTGCGGCGTTGTTCGAAGACAGTCTGTTCTTCGAACTGGCCGCGCATGC CAATGCCATGGCGCAACGCTTGCGCGCCGGCCTGCTTGCGGCCGGCGCGCACTTCACCAGCGACTCGCCGACCAACCAGC AGTTCATCGCCGTCAGCGCGCAACACGCTGCGCAGCTCGTGCAACGCTACGACTTCGAGCGCTGGGAAGTGCGCACCGAT GGCAGTCAGGTAATCCGCTTCGTGACCTCGTGGGCGACCACAGCCGCGTCGGTCGATCGGCTGTGTGCGGATGTTGCCGC ACTTCATCGCGGCGTGTCGTAA
Upstream 100 bases:
>100_bases GCGTGGTCTACGACTCCGACCCCGACCTGGAGTGGCAGGAAACCATGAACAAGGGGCGTGCGCTGTTTCGCGCAGTTGCC CAGGCGGCGAAGGGCCTGTG
Downstream 100 bases:
>100_bases GCATGCGCACCAGAGCGAGCGAAACAGATGAAGCAACTCGAACGCCGGAATTTTGCCCATCCCGGTTCGCTCGATGCTGG TCAGGTGTGGCAGTCACGCC
Product: threonine aldolase
Products: NA
Alternate protein names: Low specificity L-TA [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MDGQGSATRISFRNDYSEGAHPRLLQALAQASAEQHAGYGTDRHTARAVALIRTAVAQPQADVHLLVGGTQTNLIAISAF LRPHQAVIAVDAAHIATHETGAIEATGHKVLTVPALHDKLTPALIQPVLAVHSNEHMVQPRLVYISNSTESGTIYTRAEL DALSRFCRANDLLLYLDGARLGAALTADGNDLDLPAIATLTDAFYIGGTKNGALLGEALVIVNPALQADLRYLIKQRGAL LAKGMVVGAQFAALFEDSLFFELAAHANAMAQRLRAGLLAAGAHFTSDSPTNQQFIAVSAQHAAQLVQRYDFERWEVRTD GSQVIRFVTSWATTAASVDRLCADVAALHRGVS
Sequences:
>Translated_353_residues MDGQGSATRISFRNDYSEGAHPRLLQALAQASAEQHAGYGTDRHTARAVALIRTAVAQPQADVHLLVGGTQTNLIAISAF LRPHQAVIAVDAAHIATHETGAIEATGHKVLTVPALHDKLTPALIQPVLAVHSNEHMVQPRLVYISNSTESGTIYTRAEL DALSRFCRANDLLLYLDGARLGAALTADGNDLDLPAIATLTDAFYIGGTKNGALLGEALVIVNPALQADLRYLIKQRGAL LAKGMVVGAQFAALFEDSLFFELAAHANAMAQRLRAGLLAAGAHFTSDSPTNQQFIAVSAQHAAQLVQRYDFERWEVRTD GSQVIRFVTSWATTAASVDRLCADVAALHRGVS >Mature_353_residues MDGQGSATRISFRNDYSEGAHPRLLQALAQASAEQHAGYGTDRHTARAVALIRTAVAQPQADVHLLVGGTQTNLIAISAF LRPHQAVIAVDAAHIATHETGAIEATGHKVLTVPALHDKLTPALIQPVLAVHSNEHMVQPRLVYISNSTESGTIYTRAEL DALSRFCRANDLLLYLDGARLGAALTADGNDLDLPAIATLTDAFYIGGTKNGALLGEALVIVNPALQADLRYLIKQRGAL LAKGMVVGAQFAALFEDSLFFELAAHANAMAQRLRAGLLAAGAHFTSDSPTNQQFIAVSAQHAAQLVQRYDFERWEVRTD GSQVIRFVTSWATTAASVDRLCADVAALHRGVS
Specific function: Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde. Can also act on L-erythro- phenylserine, L-threo-phenylserine, L-beta-3,4- methylenedioxyphenylserine and L-beta-3,4-dihydroxyphenylserine [H]
COG id: COG2008
COG function: function code E; Threonine aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001597 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01212 Beta_elim_lyase [H]
EC number: =4.1.2.5 [H]
Molecular weight: Translated: 37637; Mature: 37637
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGQGSATRISFRNDYSEGAHPRLLQALAQASAEQHAGYGTDRHTARAVALIRTAVAQPQ CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC ADVHLLVGGTQTNLIAISAFLRPHQAVIAVDAAHIATHETGAIEATGHKVLTVPALHDKL CCEEEEECCCCCCCEEEEEHHCCCEEEEEEEHHHHEECCCCCEEECCCEEEEECCHHHHC TPALIQPVLAVHSNEHMVQPRLVYISNSTESGTIYTRAELDALSRFCRANDLLLYLDGAR CHHHHHHHHHHCCCCCEECCEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECCC LGAALTADGNDLDLPAIATLTDAFYIGGTKNGALLGEALVIVNPALQADLRYLIKQRGAL CCEEEECCCCCCCCCHHHHHHHHEEECCCCCCCHHHCEEEEECHHHHHHHHHHHHHCCCH LAKGMVVGAQFAALFEDSLFFELAAHANAMAQRLRAGLLAAGAHFTSDSPTNQQFIAVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEH QHAAQLVQRYDFERWEVRTDGSQVIRFVTSWATTAASVDRLCADVAALHRGVS HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDGQGSATRISFRNDYSEGAHPRLLQALAQASAEQHAGYGTDRHTARAVALIRTAVAQPQ CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC ADVHLLVGGTQTNLIAISAFLRPHQAVIAVDAAHIATHETGAIEATGHKVLTVPALHDKL CCEEEEECCCCCCCEEEEEHHCCCEEEEEEEHHHHEECCCCCEEECCCEEEEECCHHHHC TPALIQPVLAVHSNEHMVQPRLVYISNSTESGTIYTRAELDALSRFCRANDLLLYLDGAR CHHHHHHHHHHCCCCCEECCEEEEEECCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECCC LGAALTADGNDLDLPAIATLTDAFYIGGTKNGALLGEALVIVNPALQADLRYLIKQRGAL CCEEEECCCCCCCCCHHHHHHHHEEECCCCCCCHHHCEEEEECHHHHHHHHHHHHHCCCH LAKGMVVGAQFAALFEDSLFFELAAHANAMAQRLRAGLLAAGAHFTSDSPTNQQFIAVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEH QHAAQLVQRYDFERWEVRTDGSQVIRFVTSWATTAASVDRLCADVAALHRGVS HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9464392 [H]