| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is trpE [H]
Identifier: 21241249
GI number: 21241249
Start: 566310
End: 567785
Strand: Direct
Name: trpE [H]
Synonym: XAC0476
Alternate gene names: 21241249
Gene position: 566310-567785 (Clockwise)
Preceding gene: 21241248
Following gene: 77748529
Centisome position: 10.94
GC content: 65.24
Gene sequence:
>1476_bases TTGATCACTGCAGAGCAGTTCCAGCGCCAGGCCGCTGAAGGTCACACCCGTATTCCCGTTGTCCGCGAAGTGTTGTCCGA CCTGGACACGCCGCTCTCGGTCTACCTGAAGCTCGCCGACGGCGCCTATACCTATCTGTTCGAATCGGTCGAAGGCGGGG AGCGCTTCGGGCGCTACTCCATCATCGGCCTGCCGGCGCGGCGCGTGTACAGCTTTCGGGGCCACACGCTGGAGGTCAGC GAACACGGCGAAGTCGTCGAGACCCGTGAGGTCGCCGACCCGCTGGCCGAAGTCGATGCGTTGCGGGCCGAACATTCGGT GCCGCAGCTGGATGGGCTGCCCGGCTTCACCGGCGGGCTGGTCGGCTGGTTCGGTTTCGAGTGCATCCAATACATCGAGC CGCGCCTGGGGAGTGGCGACAAGCCCGACGAACTCGGCACGCCGGACATCCTGCTGATGCTCTCCGAAGAGCTGGCGGTG TTCGACAATCTCAAGGGCCGTCTGTACCTGATCGTGCATGCCGACCCGCGGCAGCCGCAAGCCTATGTGCGCGCCAATCG GCGCCTGGACGAGCTGGCGCATCGCCTGCGTCAGGGCGGCGCCGGTTACCCGCAGGCGCAGATTTCCGATGCGATCGACG AAGCGGACTTCCATTCCTCTTTTACCCGCGAGGAATATCACGCCGTGGTGCGCAAGGCGCAGGAATACGTGCGTGCCGGC GATATCTTCCAGGTAGTGCCATCGCAACGCTTGCGCGTGCCGTTCCGCGCGCGCCCGGTGGATGTGTATCGCGCGTTGCG TGCACTGAATCCGTCGCCGTACATGTATTTTCTCGATGTCGGCGGTACCCAGGTGGTTGGTTCGTCGCCAGAAATTCTGG CGCGCCTGCGCGATGGCGTGGTCACTGTGCGCCCGATCGCCGGCACCCGCCCGCGCGGCGCCACGCCCGAACTGGACAAG GCACTGGAAGCCGAACTGCTGGCCGACCCGAAGGAACGCGCCGAGCACGTGATGCTGATCGATCTGGGTCGCAACGATGT CGGCCGCGTGGCCGAACCGGGCACGGTCAAGGTCGGCGAGCAGTTCGTGATCGAACGCTATAGCCATGTCATGCACATCG TCAGCGAGGTGACCGGCACCCTGAAAGCCGGCCTGAATTATAGCGACGTGCTGCGCGCCACCTTCCCGGCCGGCACTGTC AGCGGCGCGCCGAAGATCCGCGCGCTGGAAATCATCCGCGAGCTGGAGCCGGTCAAACGCAACGTGTATTCCGGCGCGGT CGGCTATATCGGCTGGCATGGCGATGCCGATACCGCCATCGCCATCCGCACCGCCGTCATCCAGGACGGTTACCTGTATG TGCAGGCCGGCGGCGGCGTGGTCTACGACTCCGACCCCGACCTGGAGTGGCAGGAAACCATGAACAAGGGGCGTGCGCTG TTTCGCGCAGTTGCCCAGGCGGCGAAGGGCCTGTGA
Upstream 100 bases:
>100_bases CTGACGACTCCACGCTCCTTCTCTTCCGCTCGCCGCTGGTGGCGATGGTGGCCCGTTGCCGTCGTCCGCCCCGCCACAGA GTCCCGGAAGGAAAGTCGTC
Downstream 100 bases:
>100_bases TGGACGGGCAGGGTAGCGCTACGCGCATCAGCTTTCGCAACGACTACAGCGAAGGCGCGCATCCGCGGCTGTTGCAGGCG TTGGCGCAGGCCAGCGCCGA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYSIIGLPARRVYSFRGHTLEVS EHGEVVETREVADPLAEVDALRAEHSVPQLDGLPGFTGGLVGWFGFECIQYIEPRLGSGDKPDELGTPDILLMLSEELAV FDNLKGRLYLIVHADPRQPQAYVRANRRLDELAHRLRQGGAGYPQAQISDAIDEADFHSSFTREEYHAVVRKAQEYVRAG DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGVVTVRPIAGTRPRGATPELDK ALEAELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGEQFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTV SGAPKIRALEIIRELEPVKRNVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL FRAVAQAAKGL
Sequences:
>Translated_491_residues MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYSIIGLPARRVYSFRGHTLEVS EHGEVVETREVADPLAEVDALRAEHSVPQLDGLPGFTGGLVGWFGFECIQYIEPRLGSGDKPDELGTPDILLMLSEELAV FDNLKGRLYLIVHADPRQPQAYVRANRRLDELAHRLRQGGAGYPQAQISDAIDEADFHSSFTREEYHAVVRKAQEYVRAG DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGVVTVRPIAGTRPRGATPELDK ALEAELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGEQFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTV SGAPKIRALEIIRELEPVKRNVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL FRAVAQAAKGL >Mature_491_residues MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYSIIGLPARRVYSFRGHTLEVS EHGEVVETREVADPLAEVDALRAEHSVPQLDGLPGFTGGLVGWFGFECIQYIEPRLGSGDKPDELGTPDILLMLSEELAV FDNLKGRLYLIVHADPRQPQAYVRANRRLDELAHRLRQGGAGYPQAQISDAIDEADFHSSFTREEYHAVVRKAQEYVRAG DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGVVTVRPIAGTRPRGATPELDK ALEAELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGEQFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTV SGAPKIRALEIIRELEPVKRNVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL FRAVAQAAKGL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=394, Percent_Identity=39.0862944162437, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1788114, Length=474, Percent_Identity=32.0675105485232, Blast_Score=235, Evalue=4e-63, Organism=Escherichia coli, GI87082077, Length=280, Percent_Identity=27.5, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1786809, Length=209, Percent_Identity=27.7511961722488, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320935, Length=501, Percent_Identity=38.3233532934132, Blast_Score=321, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6324361, Length=392, Percent_Identity=26.7857142857143, Blast_Score=119, Evalue=1e-27,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 54175; Mature: 54175
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYS CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHEEEECCCCCEEHHHHHHCCHHHCCCEE IIGLPARRVYSFRGHTLEVSEHGEVVETREVADPLAEVDALRAEHSVPQLDGLPGFTGGL EEECCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH VGWFGFECIQYIEPRLGSGDKPDELGTPDILLMLSEELAVFDNLKGRLYLIVHADPRQPQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCCH AYVRANRRLDELAHRLRQGGAGYPQAQISDAIDEADFHSSFTREEYHAVVRKAQEYVRAG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGV CHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEECCCHHHHHHHHCCC VTVRPIAGTRPRGATPELDKALEAELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGE EEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCCCCEEHHH QFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTVSGAPKIRALEIIRELEPVKR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH NVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL HHHCCCCEEEEECCCCCCEEEEEEEEEECCEEEEEECCEEEECCCCCCCHHHHHHHHHHH FRAVAQAAKGL HHHHHHHHCCC >Mature Secondary Structure MITAEQFQRQAAEGHTRIPVVREVLSDLDTPLSVYLKLADGAYTYLFESVEGGERFGRYS CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHEEEECCCCCEEHHHHHHCCHHHCCCEE IIGLPARRVYSFRGHTLEVSEHGEVVETREVADPLAEVDALRAEHSVPQLDGLPGFTGGL EEECCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH VGWFGFECIQYIEPRLGSGDKPDELGTPDILLMLSEELAVFDNLKGRLYLIVHADPRQPQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCCH AYVRANRRLDELAHRLRQGGAGYPQAQISDAIDEADFHSSFTREEYHAVVRKAQEYVRAG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DIFQVVPSQRLRVPFRARPVDVYRALRALNPSPYMYFLDVGGTQVVGSSPEILARLRDGV CHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEECCCHHHHHHHHCCC VTVRPIAGTRPRGATPELDKALEAELLADPKERAEHVMLIDLGRNDVGRVAEPGTVKVGE EEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEEECCCCCCCCCCCCCCEEHHH QFVIERYSHVMHIVSEVTGTLKAGLNYSDVLRATFPAGTVSGAPKIRALEIIRELEPVKR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH NVYSGAVGYIGWHGDADTAIAIRTAVIQDGYLYVQAGGGVVYDSDPDLEWQETMNKGRAL HHHCCCCEEEEECCCCCCEEEEEEEEEECCEEEEEECCEEEECCCCCCCHHHHHHHHHHH FRAVAQAAKGL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1987141 [H]