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The map label for this gene is yiaN [H]

Identifier: 77465669

GI number: 77465669

Start: 769762

End: 771042

Strand: Reverse

Name: yiaN [H]

Synonym: RSP_3662

Alternate gene names: 77465669

Gene position: 771042-769762 (Counterclockwise)

Preceding gene: 77465670

Following gene: 77465668

Centisome position: 81.76

GC content: 67.76

Gene sequence:

>1281_bases
ATGACCATCGGCCTCTTTCTCGGAACCCTGATCGCGATGATCGGCATCGGCGCCCCCATCGCCTATGCGCTGATCGTGAC
CGGCGCGGCGCTGATGTGGCAGATGGGGCTCTTCGACGGGCAGATCATCGCGCAGAACCTGCTGAACGCGGTCGACAGTT
TCCCGATGGTGGCGATCCCGCTCTTCATCCTCGCCGGAGAGGTGATGAACGCAGGCGGCCTGTCGCGCCGCATCGTCGAT
CTGGCGCGGGCGCTCGTCGGCCACCACCGCGGCGGCCTCGGCTATGTGACCATCTTCGCGGGCGTCCTGCTTTCGAGCCT
CTCGGGCTCGGCCCTTGCGGATGCGGCCTCGCTCTCGGCGCTGCTGCTGCCGATGATGGTGGCCGCGGGCCATGCGCGCG
AACGCTCGGGCGGTCTCATCGCGGCCTCGGCGATCATCGGCCCGATCATCCCGCCGAGCATCGGCTTCATCGTCTTCGGC
GTGGCCACGAACCTCTCGATCAGCAAGCTCTTCATGGCGGGCATCGCGCCGGGCCTGATGATCGGGCTCGCGCTCTGCAT
CGCGTGGTTCTTCGTCTCGCGCCGCGACGATGTGGCGACCGCACCCAAGGTCGGTGCGCGCGAGCGGCTGCGGGCCTTCG
GCCGCAGCCTCTGGGCGCTGATGCTGCCGGTGATCATCATCGTCGGGCTGCGCTTCGGCATCGTGACCCCGACCGAGGCC
GCCGCCGTCGCCGCCGTCTATGCGCTCTTCGTGGCGCTGGTCGTCTACCGCGAGCTGAGCTGGCGCGACCTGCCGGACCT
CGTGCTCGACGCAGGCAAGACCGCGGCGGGCGTGATGTTCCTCGTGGCCGCGGCCGCGATTCCGGCCTGGATGATCTCGG
TGGCCGACATTCCGGGCCAGCTCGTCGACCTGATCGAGCCGCTGATGGGCAACCAGACGCTGCTGATCGTGGTGCTGATG
CTGCTGATCCTGATGGTGGGGACGGCGATGGATCTCACCCCGACGATCCTCCTGCTCGGCCCCATTCTGGTGCCGGTGGT
GATCGAGGCAGGCATCGATCCGATCTATTTCGGGGTGCTCTTCATGATCAACTGCTCGATCGGCCTCATCACGCCGCCGG
TCGGCACGGTGCTGAACGTGGTCTGCGCCGTGGGCCGTCTCGATTACGAGGCACTGGTGCGCGGGACGCTGCCCTTCCTC
CTCGCGCAGGTGGCCGTGCTGTTCCTCCTGATCCTCTTCCCCGCCCTCGTGACCCAGCCGCTGCAGTGGTTGCTGCACTG
A

Upstream 100 bases:

>100_bases
TGACCGGGCGTCTGCCGCAGAGCGCGCTGCGCCCCGGCACCTCCGAAGAGGAAAGCGATGTCGAGCGCCATGTGGGCGCG
CTCGCGCCGGAGGGCCGCAA

Downstream 100 bases:

>100_bases
CATTCCACAGGAGCCCCAGAAGCTCCGGAATATCCCGACCGACCGAAACTCCAACAAGGACAGACCCATGAAACTGATCC
ACGGCCTTCTGGCCGCCGCC

Product: TRAP-T family transporter large inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTIGLFLGTLIAMIGIGAPIAYALIVTGAALMWQMGLFDGQIIAQNLLNAVDSFPMVAIPLFILAGEVMNAGGLSRRIVD
LARALVGHHRGGLGYVTIFAGVLLSSLSGSALADAASLSALLLPMMVAAGHARERSGGLIAASAIIGPIIPPSIGFIVFG
VATNLSISKLFMAGIAPGLMIGLALCIAWFFVSRRDDVATAPKVGARERLRAFGRSLWALMLPVIIIVGLRFGIVTPTEA
AAVAAVYALFVALVVYRELSWRDLPDLVLDAGKTAAGVMFLVAAAAIPAWMISVADIPGQLVDLIEPLMGNQTLLIVVLM
LLILMVGTAMDLTPTILLLGPILVPVVIEAGIDPIYFGVLFMINCSIGLITPPVGTVLNVVCAVGRLDYEALVRGTLPFL
LAQVAVLFLLILFPALVTQPLQWLLH

Sequences:

>Translated_426_residues
MTIGLFLGTLIAMIGIGAPIAYALIVTGAALMWQMGLFDGQIIAQNLLNAVDSFPMVAIPLFILAGEVMNAGGLSRRIVD
LARALVGHHRGGLGYVTIFAGVLLSSLSGSALADAASLSALLLPMMVAAGHARERSGGLIAASAIIGPIIPPSIGFIVFG
VATNLSISKLFMAGIAPGLMIGLALCIAWFFVSRRDDVATAPKVGARERLRAFGRSLWALMLPVIIIVGLRFGIVTPTEA
AAVAAVYALFVALVVYRELSWRDLPDLVLDAGKTAAGVMFLVAAAAIPAWMISVADIPGQLVDLIEPLMGNQTLLIVVLM
LLILMVGTAMDLTPTILLLGPILVPVVIEAGIDPIYFGVLFMINCSIGLITPPVGTVLNVVCAVGRLDYEALVRGTLPFL
LAQVAVLFLLILFPALVTQPLQWLLH
>Mature_425_residues
TIGLFLGTLIAMIGIGAPIAYALIVTGAALMWQMGLFDGQIIAQNLLNAVDSFPMVAIPLFILAGEVMNAGGLSRRIVDL
ARALVGHHRGGLGYVTIFAGVLLSSLSGSALADAASLSALLLPMMVAAGHARERSGGLIAASAIIGPIIPPSIGFIVFGV
ATNLSISKLFMAGIAPGLMIGLALCIAWFFVSRRDDVATAPKVGARERLRAFGRSLWALMLPVIIIVGLRFGIVTPTEAA
AVAAVYALFVALVVYRELSWRDLPDLVLDAGKTAAGVMFLVAAAAIPAWMISVADIPGQLVDLIEPLMGNQTLLIVVLML
LILMVGTAMDLTPTILLLGPILVPVVIEAGIDPIYFGVLFMINCSIGLITPPVGTVLNVVCAVGRLDYEALVRGTLPFLL
AQVAVLFLLILFPALVTQPLQWLLH

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system yiaMNO involved in the uptake of 2,3- diketo-L-gulonate [H]

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=424, Percent_Identity=54.0094339622642, Blast_Score=403, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44654; Mature: 44523

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCC
>Mature Secondary Structure 
TIGLFLGTLIAMIGIGAPIAYALIVTGAALMWQMGLFDGQIIAQNLLNAVDSFPMVAIP
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
LFILAGEVMNAGGLSRRIVDLARALVGHHRGGLGYVTIFAGVLLSSLSGSALADAASLSA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLLPMMVAAGHARERSGGLIAASAIIGPIIPPSIGFIVFGVATNLSISKLFMAGIAPGLM
HHHHHHHHHCCCCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHH
IGLALCIAWFFVSRRDDVATAPKVGARERLRAFGRSLWALMLPVIIIVGLRFGIVTPTEA
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AAVAAVYALFVALVVYRELSWRDLPDLVLDAGKTAAGVMFLVAAAAIPAWMISVADIPGQ
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
LVDLIEPLMGNQTLLIVVLMLLILMVGTAMDLTPTILLLGPILVPVVIEAGIDPIYFGVL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FMINCSIGLITPPVGTVLNVVCAVGRLDYEALVRGTLPFLLAQVAVLFLLILFPALVTQP
HHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQWLLH
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]