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The map label for this gene is yiaO [C]

Identifier: 77465668

GI number: 77465668

Start: 768699

End: 769694

Strand: Reverse

Name: yiaO [C]

Synonym: RSP_3661

Alternate gene names: 77465668

Gene position: 769694-768699 (Counterclockwise)

Preceding gene: 77465669

Following gene: 77465667

Centisome position: 81.62

GC content: 64.26

Gene sequence:

>996_bases
ATGAAACTGATCCACGGCCTTCTGGCCGCCGCCCTTCTTGCGACCGGCGCACAGGCGCAGGACTACAGCAGCCGCACCAT
CAAGTTCGCCGCCACCGGTCAGGAAGGCACGCCTCCGGTGCAGGGCATGCATATCTTCGCGCAGAAGCTCGAGGAGCAGA
GCGGCGGCAAGCTGAAGACGCGCGTCTTCGCCAATGGCGTGCTCGGCGGCGATGTGCAGGTGCTGTCGTCGCTTCAGGGC
GGCGTGGTCGAGATGATGGTCTGGAACGCCGGCAACATGATGACCCAGGCGCAGGATTTCGGCATCCTCGATCTGCCCTT
CATCTATCAGGACGAAGAGGTGATGGATGCGCTGCTCGACGGCGAGGTCGGCAGGAAGCTCACCGATCAGCTGCCCGAAC
ATGGCGTGATCGGCCTGTCCTTCTGGGAACAGGGCTTCCGCCAGCTGACCAACGACACCCGCGAGGTGCACAGGCTCGAG
GATATCGCGGGCCTCAAGGTCCGCGTGCAGCAGAACCCGCTTCTCGTCGACATGTGGCGGGCGCTCGGTGCCAATCCCAC
GCCGATGGCGGTGACCGAACTCTACACCGCGCTCGAGACCGGCGCCGTGGACGGGCAGGAATGCACCGCGCCCTTCGCTC
TCACCGCGAAATATACCGAGGTGCAGAAATATCTCTCGGTCACCCGCCACAACTACAATCCGCAGATCGTGCTGATCGGC
AAACCCTTCTGGGACAAGCTCACCGACGATGAAAAGGCCCTGATCCAGAAGGTCGCGCAGGAGACTGCGGTCGAACAGCG
CCGCATTTCGCGCGCGGCGCAGGACAGCGCGCTGGAGGAGATCCGGGCGGCCGGCAATGTCGTGACCGAGATCACCCCCG
AAGAGCTCGCCCGCATGCAGGAGGCCGTCGCCCCGGTCATCCGCACCTATGCACAGACCTTCGATCCCGAGCTCGTGCGC
ACCGTCTTCGATGCGGTCGGCTTCTCGCTGGATTGA

Upstream 100 bases:

>100_bases
GTGACCCAGCCGCTGCAGTGGTTGCTGCACTGACATTCCACAGGAGCCCCAGAAGCTCCGGAATATCCCGACCGACCGAA
ACTCCAACAAGGACAGACCC

Downstream 100 bases:

>100_bases
GCCCGGCCGGGACCCGCGCCGCGGGTCCCGCTCCCGCAGAATGGAGTGGACATGAAAATCGCATTCGCCCAGCTGTCGCC
CGTGCACGGCGACACCCCTG

Product: TRAP-T family transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKLIHGLLAAALLATGAQAQDYSSRTIKFAATGQEGTPPVQGMHIFAQKLEEQSGGKLKTRVFANGVLGGDVQVLSSLQG
GVVEMMVWNAGNMMTQAQDFGILDLPFIYQDEEVMDALLDGEVGRKLTDQLPEHGVIGLSFWEQGFRQLTNDTREVHRLE
DIAGLKVRVQQNPLLVDMWRALGANPTPMAVTELYTALETGAVDGQECTAPFALTAKYTEVQKYLSVTRHNYNPQIVLIG
KPFWDKLTDDEKALIQKVAQETAVEQRRISRAAQDSALEEIRAAGNVVTEITPEELARMQEAVAPVIRTYAQTFDPELVR
TVFDAVGFSLD

Sequences:

>Translated_331_residues
MKLIHGLLAAALLATGAQAQDYSSRTIKFAATGQEGTPPVQGMHIFAQKLEEQSGGKLKTRVFANGVLGGDVQVLSSLQG
GVVEMMVWNAGNMMTQAQDFGILDLPFIYQDEEVMDALLDGEVGRKLTDQLPEHGVIGLSFWEQGFRQLTNDTREVHRLE
DIAGLKVRVQQNPLLVDMWRALGANPTPMAVTELYTALETGAVDGQECTAPFALTAKYTEVQKYLSVTRHNYNPQIVLIG
KPFWDKLTDDEKALIQKVAQETAVEQRRISRAAQDSALEEIRAAGNVVTEITPEELARMQEAVAPVIRTYAQTFDPELVR
TVFDAVGFSLD
>Mature_331_residues
MKLIHGLLAAALLATGAQAQDYSSRTIKFAATGQEGTPPVQGMHIFAQKLEEQSGGKLKTRVFANGVLGGDVQVLSSLQG
GVVEMMVWNAGNMMTQAQDFGILDLPFIYQDEEVMDALLDGEVGRKLTDQLPEHGVIGLSFWEQGFRQLTNDTREVHRLE
DIAGLKVRVQQNPLLVDMWRALGANPTPMAVTELYTALETGAVDGQECTAPFALTAKYTEVQKYLSVTRHNYNPQIVLIG
KPFWDKLTDDEKALIQKVAQETAVEQRRISRAAQDSALEEIRAAGNVVTEITPEELARMQEAVAPVIRTYAQTFDPELVR
TVFDAVGFSLD

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=286, Percent_Identity=33.2167832167832, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36420; Mature: 36420

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIHGLLAAALLATGAQAQDYSSRTIKFAATGQEGTPPVQGMHIFAQKLEEQSGGKLKT
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEE
RVFANGVLGGDVQVLSSLQGGVVEMMVWNAGNMMTQAQDFGILDLPFIYQDEEVMDALLD
HEEECCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCCCCEECCHHHHHHHHC
GEVGRKLTDQLPEHGVIGLSFWEQGFRQLTNDTREVHRLEDIAGLKVRVQQNPLLVDMWR
CHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
ALGANPTPMAVTELYTALETGAVDGQECTAPFALTAKYTEVQKYLSVTRHNYNPQIVLIG
HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEE
KPFWDKLTDDEKALIQKVAQETAVEQRRISRAAQDSALEEIRAAGNVVTEITPEELARMQ
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHH
EAVAPVIRTYAQTFDPELVRTVFDAVGFSLD
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLIHGLLAAALLATGAQAQDYSSRTIKFAATGQEGTPPVQGMHIFAQKLEEQSGGKLKT
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEE
RVFANGVLGGDVQVLSSLQGGVVEMMVWNAGNMMTQAQDFGILDLPFIYQDEEVMDALLD
HEEECCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCCCCEECCHHHHHHHHC
GEVGRKLTDQLPEHGVIGLSFWEQGFRQLTNDTREVHRLEDIAGLKVRVQQNPLLVDMWR
CHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
ALGANPTPMAVTELYTALETGAVDGQECTAPFALTAKYTEVQKYLSVTRHNYNPQIVLIG
HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEE
KPFWDKLTDDEKALIQKVAQETAVEQRRISRAAQDSALEEIRAAGNVVTEITPEELARMQ
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHH
EAVAPVIRTYAQTFDPELVRTVFDAVGFSLD
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]