| Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007494 |
| Length | 943,016 |
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The map label for this gene is ybeZ [H]
Identifier: 77465600
GI number: 77465600
Start: 691785
End: 692825
Strand: Reverse
Name: ybeZ [H]
Synonym: RSP_3599
Alternate gene names: 77465600
Gene position: 692825-691785 (Counterclockwise)
Preceding gene: 77465601
Following gene: 77465599
Centisome position: 73.47
GC content: 65.61
Gene sequence:
>1041_bases ATGGCCCTCCAGCACAAGGAGTTGTCTTTGGGCATCAGCGCGCTGACCCCCCCGACCCGTTCCGAGGATGTCGTGGAAAC GCTTCTCGAATTCCCTGACAATCGTCTCCTGATCGATCTCTGCGGCGAGTATGACCGCAACCTGGCGCAGATCGAACATC AGATGGGCGTGCATATCCTGCGCCGGGGCAACCGGCTGGCGGTGATCGGCGACAGGGAAGCGCGGGATCAGGCGTCATCG GTGCTCCGAGGCCTCTATTCCCGGCTCGAGGCGGGCCGCGGTCTTGTCGCGGGCGACATCGACGGGGCGATCCGGCTGGG TCGCCCGGTGCTCGACGCGGCACAGGGCGAGCAGATCGAACTTTTCACCCCGGGAAAATACGAGATCCGCACCCGGAAGA AGCCGGTCGAGCCGCGCACCGAGGCGCAGAAGGCCTATGTCGCCAATCTCTTCGATCACGAACTGGCCTTCGGCATCGGC CCGGCGGGCACCGGCAAGACCTATCTTGCCGTCGCCGTGGGCGTGACCATGCTGATCGGCGGCGTGGTCGACCGGATCAT CCTCTCGCGTCCCGCGGTCGAGGCGGGCGAGCGGCTGGGGTTCCTGCCCGGCGACATGAAGGAGAAGATCGACCCCTACA TGCAGCCGCTCTACGATGCGCTGAACGATTTCCTGCCGCAGAAGCAGCTCATGAAGCTGATGGAGGAGAAGCGGATCGAG ATCGCGCCGCTCGCCTTCATGCGCGGGCGCACCCTCTCGAACGCCTTCGTCGTGCTCGACGAGGCGCAGAACGCGACCAC CATGCAGATGAAGATGTTCCTCACGCGTCTGGGCGAGGGCAGCCGCATGGTCGTCACCGGCGACCGCACGCAGATCGACC TGCCGCGGGGCACCGCCTCGGGGCTCGCCGATGCCGAGCGGGTGCTGAAGTCGGTGCGCGGGGTCTCGTTCAACTACTTC ACGGCCAAGGATGTGGTGCGCCACCCGCTTGTGGCCCGCATCATCGAGGCGTATGAGGCCGAAGATGGAGCCTCTGGTTG A
Upstream 100 bases:
>100_bases GCGCTCTTCTCTTGCGTCCTTTCCGTGCAGCGTCACAAGAAATTGTGGTTTCGTCACCTATTTTCTTGCCTTGGGGCCAT CGCGACCCCACTCTTGATAC
Downstream 100 bases:
>100_bases GACAGTGATCGAAGACGGGCGCTGGGAGGAGCTTGACCTCCCCGCGCTCGCGACCCGTGCGGCCGAGGCCACCCTCGCGG CGCTGGACATGCCGGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MALQHKELSLGISALTPPTRSEDVVETLLEFPDNRLLIDLCGEYDRNLAQIEHQMGVHILRRGNRLAVIGDREARDQASS VLRGLYSRLEAGRGLVAGDIDGAIRLGRPVLDAAQGEQIELFTPGKYEIRTRKKPVEPRTEAQKAYVANLFDHELAFGIG PAGTGKTYLAVAVGVTMLIGGVVDRIILSRPAVEAGERLGFLPGDMKEKIDPYMQPLYDALNDFLPQKQLMKLMEEKRIE IAPLAFMRGRTLSNAFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGTASGLADAERVLKSVRGVSFNYF TAKDVVRHPLVARIIEAYEAEDGASG
Sequences:
>Translated_346_residues MALQHKELSLGISALTPPTRSEDVVETLLEFPDNRLLIDLCGEYDRNLAQIEHQMGVHILRRGNRLAVIGDREARDQASS VLRGLYSRLEAGRGLVAGDIDGAIRLGRPVLDAAQGEQIELFTPGKYEIRTRKKPVEPRTEAQKAYVANLFDHELAFGIG PAGTGKTYLAVAVGVTMLIGGVVDRIILSRPAVEAGERLGFLPGDMKEKIDPYMQPLYDALNDFLPQKQLMKLMEEKRIE IAPLAFMRGRTLSNAFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGTASGLADAERVLKSVRGVSFNYF TAKDVVRHPLVARIIEAYEAEDGASG >Mature_345_residues ALQHKELSLGISALTPPTRSEDVVETLLEFPDNRLLIDLCGEYDRNLAQIEHQMGVHILRRGNRLAVIGDREARDQASSV LRGLYSRLEAGRGLVAGDIDGAIRLGRPVLDAAQGEQIELFTPGKYEIRTRKKPVEPRTEAQKAYVANLFDHELAFGIGP AGTGKTYLAVAVGVTMLIGGVVDRIILSRPAVEAGERLGFLPGDMKEKIDPYMQPLYDALNDFLPQKQLMKLMEEKRIEI APLAFMRGRTLSNAFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGTASGLADAERVLKSVRGVSFNYFT AKDVVRHPLVARIIEAYEAEDGASG
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=327, Percent_Identity=49.5412844036697, Blast_Score=297, Evalue=6e-82, Organism=Escherichia coli, GI1787257, Length=206, Percent_Identity=47.5728155339806, Blast_Score=186, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38104; Mature: 37972
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQHKELSLGISALTPPTRSEDVVETLLEFPDNRLLIDLCGEYDRNLAQIEHQMGVHIL CCCCCCHHHCCHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH RRGNRLAVIGDREARDQASSVLRGLYSRLEAGRGLVAGDIDGAIRLGRPVLDAAQGEQIE HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCHHHHCCCCCEEE LFTPGKYEIRTRKKPVEPRTEAQKAYVANLFDHELAFGIGPAGTGKTYLAVAVGVTMLIG EECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH GVVDRIILSRPAVEAGERLGFLPGDMKEKIDPYMQPLYDALNDFLPQKQLMKLMEEKRIE HHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCE IAPLAFMRGRTLSNAFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGTAS EEHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCC GLADAERVLKSVRGVSFNYFTAKDVVRHPLVARIIEAYEAEDGASG HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALQHKELSLGISALTPPTRSEDVVETLLEFPDNRLLIDLCGEYDRNLAQIEHQMGVHIL CCCCCHHHCCHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH RRGNRLAVIGDREARDQASSVLRGLYSRLEAGRGLVAGDIDGAIRLGRPVLDAAQGEQIE HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCHHHHCCCCCEEE LFTPGKYEIRTRKKPVEPRTEAQKAYVANLFDHELAFGIGPAGTGKTYLAVAVGVTMLIG EECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH GVVDRIILSRPAVEAGERLGFLPGDMKEKIDPYMQPLYDALNDFLPQKQLMKLMEEKRIE HHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCE IAPLAFMRGRTLSNAFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGTAS EEHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCC GLADAERVLKSVRGVSFNYFTAKDVVRHPLVARIIEAYEAEDGASG HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]