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The map label for this gene is dppB [H]

Identifier: 77465244

GI number: 77465244

Start: 291187

End: 292194

Strand: Direct

Name: dppB [H]

Synonym: RSP_3232

Alternate gene names: 77465244

Gene position: 291187-292194 (Clockwise)

Preceding gene: 77465243

Following gene: 77465245

Centisome position: 30.88

GC content: 64.88

Gene sequence:

>1008_bases
ATGATCAGATTCCTCCTCGGCAAGCTTGCCTATCTGATACCGACCTTCCTCGGCATCACCATCGTGGCCTTCGGCTTCGT
GCGGCTCCTGCCGGGCGATCCGGTGCTGCTCCTGGCGGGCGAACGCGGCATCACGCCCGAGCGTCACGCCGAACTCTCGG
CCCAGCTCGGCTTCGACCGACCCATCTGGGTGCAGTATTTCGACTTCCTCGGGAACCTGTTTCAGGGCGACTTCGGCCTG
TCGCTGACCACCAAGAAACCCGTCCTGACCGAGTTCCTGACGCTGTTCCCGGCGACGGTCGAGCTCGGACTGGTGGCGGT
CACGCTCGCCACGCTGATCGGCATTCCGCTGGGCGTCTTCGCCGCCATCAAGCGCGGCAGCTGGTTCGACCAGATCTCGA
TGGGCACGGCGCTGGTGGGCTATTCGATGCCGATCTTCTGGTGGGGGCTGCTGCTCATCATCTTCTTCTCGGGCATCCTG
AAATGGACCCCGGTCTCGGGGCGAATCGACCTGCTCTACTTCTTCCCGAACGGCACCGGCTTCATGCTGTGGGATTCGCT
CGTTTCGGGGCAGAAGGGCGCCTTCCTCTCGGCGGTGCGCCACCTGATCCTGCCCGCCATCGTGCTGGCCACGATCCCGA
TGGCGGTGATCGCGCGGCAGTCGCGCTCGGCCATGCTCGAGGTGCTGGGCGAGGACTATGTCCGCACCGCGCGGGCCAAG
GGCATGAGCCCCTTCCGCGTGATCTCGGTTCATGCGCTGAGGAACGCGCTGATCCCGGTGGTGACGACCATCGGCCTGCA
GGTCGGCGTGGTGATGGCGGGGGCCATCCTCACCGAGACCATCTTCTCCTGGCCGGGCATCGGCAAATGGATGATCGACT
CCATCTCGCGCCGCGACTATCCGTCGGTGCAGGGCGGCCTGCTGCTCATGGCGGGCGTCGTGATGCTGGTCAACCTGATC
GTCGATCTCCTCTACGGGGTCATCAACCCCCGCATCCGTCATTCGTGA

Upstream 100 bases:

>100_bases
CACAGCTTCTCGGGCGTCGATATCGAAGAGTGAAACGGCTAAAGTAACGGGCAGGCGCGCCGGGAGCACCCCGGCGCGCC
TCTCATCATTCAGGGCTCAG

Downstream 100 bases:

>100_bases
GGGCTCCATGACCGACGTGACAAAGCCCGTTTCGCAGGGCTCGGAAACGAAGCGCCTGCTGCGCGAGTTCTGGTTCTACT
TCTCCGAGAACCGTGGTGCC

Product: ABC peptide transporter, inner membrane subunit

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIRFLLGKLAYLIPTFLGITIVAFGFVRLLPGDPVLLLAGERGITPERHAELSAQLGFDRPIWVQYFDFLGNLFQGDFGL
SLTTKKPVLTEFLTLFPATVELGLVAVTLATLIGIPLGVFAAIKRGSWFDQISMGTALVGYSMPIFWWGLLLIIFFSGIL
KWTPVSGRIDLLYFFPNGTGFMLWDSLVSGQKGAFLSAVRHLILPAIVLATIPMAVIARQSRSAMLEVLGEDYVRTARAK
GMSPFRVISVHALRNALIPVVTTIGLQVGVVMAGAILTETIFSWPGIGKWMIDSISRRDYPSVQGGLLLMAGVVMLVNLI
VDLLYGVINPRIRHS

Sequences:

>Translated_335_residues
MIRFLLGKLAYLIPTFLGITIVAFGFVRLLPGDPVLLLAGERGITPERHAELSAQLGFDRPIWVQYFDFLGNLFQGDFGL
SLTTKKPVLTEFLTLFPATVELGLVAVTLATLIGIPLGVFAAIKRGSWFDQISMGTALVGYSMPIFWWGLLLIIFFSGIL
KWTPVSGRIDLLYFFPNGTGFMLWDSLVSGQKGAFLSAVRHLILPAIVLATIPMAVIARQSRSAMLEVLGEDYVRTARAK
GMSPFRVISVHALRNALIPVVTTIGLQVGVVMAGAILTETIFSWPGIGKWMIDSISRRDYPSVQGGLLLMAGVVMLVNLI
VDLLYGVINPRIRHS
>Mature_335_residues
MIRFLLGKLAYLIPTFLGITIVAFGFVRLLPGDPVLLLAGERGITPERHAELSAQLGFDRPIWVQYFDFLGNLFQGDFGL
SLTTKKPVLTEFLTLFPATVELGLVAVTLATLIGIPLGVFAAIKRGSWFDQISMGTALVGYSMPIFWWGLLLIIFFSGIL
KWTPVSGRIDLLYFFPNGTGFMLWDSLVSGQKGAFLSAVRHLILPAIVLATIPMAVIARQSRSAMLEVLGEDYVRTARAK
GMSPFRVISVHALRNALIPVVTTIGLQVGVVMAGAILTETIFSWPGIGKWMIDSISRRDYPSVQGGLLLMAGVVMLVNLI
VDLLYGVINPRIRHS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=60.0591715976331, Blast_Score=427, Evalue=1e-121,
Organism=Escherichia coli, GI1787761, Length=316, Percent_Identity=45.8860759493671, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1787053, Length=339, Percent_Identity=39.5280235988201, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1787550, Length=277, Percent_Identity=38.6281588447653, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1789888, Length=337, Percent_Identity=35.9050445103858, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI1787497, Length=335, Percent_Identity=34.9253731343284, Blast_Score=194, Evalue=7e-51,
Organism=Escherichia coli, GI1788504, Length=295, Percent_Identity=32.8813559322034, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36678; Mature: 36678

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFLLGKLAYLIPTFLGITIVAFGFVRLLPGDPVLLLAGERGITPERHAELSAQLGFDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCC
PIWVQYFDFLGNLFQGDFGLSLTTKKPVLTEFLTLFPATVELGLVAVTLATLIGIPLGVF
CHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIKRGSWFDQISMGTALVGYSMPIFWWGLLLIIFFSGILKWTPVSGRIDLLYFFPNGTG
HHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
FMLWDSLVSGQKGAFLSAVRHLILPAIVLATIPMAVIARQSRSAMLEVLGEDYVRTARAK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMSPFRVISVHALRNALIPVVTTIGLQVGVVMAGAILTETIFSWPGIGKWMIDSISRRDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
PSVQGGLLLMAGVVMLVNLIVDLLYGVINPRIRHS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRFLLGKLAYLIPTFLGITIVAFGFVRLLPGDPVLLLAGERGITPERHAELSAQLGFDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCC
PIWVQYFDFLGNLFQGDFGLSLTTKKPVLTEFLTLFPATVELGLVAVTLATLIGIPLGVF
CHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIKRGSWFDQISMGTALVGYSMPIFWWGLLLIIFFSGILKWTPVSGRIDLLYFFPNGTG
HHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
FMLWDSLVSGQKGAFLSAVRHLILPAIVLATIPMAVIARQSRSAMLEVLGEDYVRTARAK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMSPFRVISVHALRNALIPVVTTIGLQVGVVMAGAILTETIFSWPGIGKWMIDSISRRDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
PSVQGGLLLMAGVVMLVNLIVDLLYGVINPRIRHS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]