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The map label for this gene is glxA [H]

Identifier: 77465217

GI number: 77465217

Start: 256635

End: 257666

Strand: Direct

Name: glxA [H]

Synonym: RSP_3203

Alternate gene names: 77465217

Gene position: 256635-257666 (Clockwise)

Preceding gene: 77465216

Following gene: 77465218

Centisome position: 27.21

GC content: 70.83

Gene sequence:

>1032_bases
TTGCCCACCCACGCCCCTCTCGTGCCGCCGGGCGCGGCCTATTATCCGGTGCAGAGCGCAGGCGACACGCGCAGCTACGC
CTTCCTGCTGGTGCCGGGCTTCACGCTTCTGGCCTTCAGTTCCGCCGTCGAGCCCCTGCGCATCGCCAACCAGCTGTCGC
AGAAGCCGCTCTACCGGTGGCGCGTCCTGTCCGAAGGCGGGCGTCCGGTCGCCAGCTCCTCGGGCATCACGGTGGCGGCC
GATGAGGCGCTGGGACCGCTCGACCGCGAGACCGACCTCATGGTCTGCGCGGGCAACATCCCCTCGGCCGCAGCCGGCTC
GGCGGTGGTGGCCACCGTCCAGCGCCACCACCGCTTCGGCGGCACGGTGGGCGGCATCTGCACCGGCGCCTTCGCCCTCG
CCCATGCGGGCGTGCTCGAAGACCGCCGCTTCACCCTCCATTGGGAGAACCAGCCCGGCTTTCTCGAGGATTTCCCCCGC
CTCGTGCCGACCTCGAACCGGTTCGAGAGCGCAGGTCGCACGCTGACCTGCGGCGGCGGGGCGGCCTCGACCGACATGAT
GCTCTCGCTGATCGCCCGGGACCACGGCGCCGATTTCGCCGCCATGGTCTCGGACATGTGCCTGCGCACCGTGCTCGCGG
GGGCCGCGCCCGAGCAGCGCAGCTCGCTCGCCGCCCTGATGCGCTCGCGCAGCCCCGCGCTGATCGCGGTGGTGAAACTC
ATGAACGAGCATCTGGAGGACACGCTCTCGCTCGAGGAACTGTCCGACGCCGCGGGCTGCTCGCGCCGCCATGTCGAACG
GCTCTTCAAGGCCACGGTGGGCGAGACGCCGAACGGCTTCTACCGCGGCCTGCGGCTCGACCGGGGGCGCAATCTGCTCA
GCACCACCGACATGACGCTGCTCGAAGTGGCGACCGCCTGCGGCTTCAACTCGGTCTCGCATTTCTCGAAATGCTTCAAG
GCGCGGTTCGGGACGGTGCCCACGCGCTTCAGCCACCGCAGCCGCAGCCCGAGCCGGATGGCGCGCGCCTAG

Upstream 100 bases:

>100_bases
GTGAGCCGAATTGCGCCGCTCGCACGATTGCGGGCTGCCTCCGGACCCGGCACAAGCGCGGGAAGGCGGCCGTCTGGCTG
CCGCCTCGGAGGCCAGGAAC

Downstream 100 bases:

>100_bases
ACGGGGGCCTGACGCGCCCGTAGGGCGGCGCTGGTCGGACTGCCGCCCGCTCCCCCGCAGGACCGGCAGGAGAGCGCCGC
GCAGAGGCGGCCGTCCCGTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MPTHAPLVPPGAAYYPVQSAGDTRSYAFLLVPGFTLLAFSSAVEPLRIANQLSQKPLYRWRVLSEGGRPVASSSGITVAA
DEALGPLDRETDLMVCAGNIPSAAAGSAVVATVQRHHRFGGTVGGICTGAFALAHAGVLEDRRFTLHWENQPGFLEDFPR
LVPTSNRFESAGRTLTCGGGAASTDMMLSLIARDHGADFAAMVSDMCLRTVLAGAAPEQRSSLAALMRSRSPALIAVVKL
MNEHLEDTLSLEELSDAAGCSRRHVERLFKATVGETPNGFYRGLRLDRGRNLLSTTDMTLLEVATACGFNSVSHFSKCFK
ARFGTVPTRFSHRSRSPSRMARA

Sequences:

>Translated_343_residues
MPTHAPLVPPGAAYYPVQSAGDTRSYAFLLVPGFTLLAFSSAVEPLRIANQLSQKPLYRWRVLSEGGRPVASSSGITVAA
DEALGPLDRETDLMVCAGNIPSAAAGSAVVATVQRHHRFGGTVGGICTGAFALAHAGVLEDRRFTLHWENQPGFLEDFPR
LVPTSNRFESAGRTLTCGGGAASTDMMLSLIARDHGADFAAMVSDMCLRTVLAGAAPEQRSSLAALMRSRSPALIAVVKL
MNEHLEDTLSLEELSDAAGCSRRHVERLFKATVGETPNGFYRGLRLDRGRNLLSTTDMTLLEVATACGFNSVSHFSKCFK
ARFGTVPTRFSHRSRSPSRMARA
>Mature_342_residues
PTHAPLVPPGAAYYPVQSAGDTRSYAFLLVPGFTLLAFSSAVEPLRIANQLSQKPLYRWRVLSEGGRPVASSSGITVAAD
EALGPLDRETDLMVCAGNIPSAAAGSAVVATVQRHHRFGGTVGGICTGAFALAHAGVLEDRRFTLHWENQPGFLEDFPRL
VPTSNRFESAGRTLTCGGGAASTDMMLSLIARDHGADFAAMVSDMCLRTVLAGAAPEQRSSLAALMRSRSPALIAVVKLM
NEHLEDTLSLEELSDAAGCSRRHVERLFKATVGETPNGFYRGLRLDRGRNLLSTTDMTLLEVATACGFNSVSHFSKCFKA
RFGTVPTRFSHRSRSPSRMARA

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789993, Length=100, Percent_Identity=30, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36753; Mature: 36622

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTHAPLVPPGAAYYPVQSAGDTRSYAFLLVPGFTLLAFSSAVEPLRIANQLSQKPLYRW
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHCCHHEE
RVLSEGGRPVASSSGITVAADEALGPLDRETDLMVCAGNIPSAAAGSAVVATVQRHHRFG
HEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
GTVGGICTGAFALAHAGVLEDRRFTLHWENQPGFLEDFPRLVPTSNRFESAGRTLTCGGG
CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHCCCEEEECCC
AASTDMMLSLIARDHGADFAAMVSDMCLRTVLAGAAPEQRSSLAALMRSRSPALIAVVKL
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
MNEHLEDTLSLEELSDAAGCSRRHVERLFKATVGETPNGFYRGLRLDRGRNLLSTTDMTL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCEECCCCCCCHHHHHHHH
LEVATACGFNSVSHFSKCFKARFGTVPTRFSHRSRSPSRMARA
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
PTHAPLVPPGAAYYPVQSAGDTRSYAFLLVPGFTLLAFSSAVEPLRIANQLSQKPLYRW
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHCCHHEE
RVLSEGGRPVASSSGITVAADEALGPLDRETDLMVCAGNIPSAAAGSAVVATVQRHHRFG
HEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
GTVGGICTGAFALAHAGVLEDRRFTLHWENQPGFLEDFPRLVPTSNRFESAGRTLTCGGG
CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHCCCEEEECCC
AASTDMMLSLIARDHGADFAAMVSDMCLRTVLAGAAPEQRSSLAALMRSRSPALIAVVKL
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
MNEHLEDTLSLEELSDAAGCSRRHVERLFKATVGETPNGFYRGLRLDRGRNLLSTTDMTL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCEECCCCCCCHHHHHHHH
LEVATACGFNSVSHFSKCFKARFGTVPTRFSHRSRSPSRMARA
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]