| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is coaBC [H]
Identifier: 77461761
GI number: 77461761
Start: 6209174
End: 6210397
Strand: Direct
Name: coaBC [H]
Synonym: Pfl01_5540
Alternate gene names: 77461761
Gene position: 6209174-6210397 (Clockwise)
Preceding gene: 77461759
Following gene: 77461762
Centisome position: 96.44
GC content: 64.13
Gene sequence:
>1224_bases ATGAAAGGCAGACCTATGCAGCGGCTGTATCGGAAACGCATCGTTCTGGGCGTCGGCGGCGGCATTGCTGCCTACAAGAG CGCCGACCTTGTGCGCCGCCTGATCGACCAGGGCGCCGAAGTGCGCGTGGTCATGACCCGCGGCGGCAGCGAATTCATCA CCCCGCTGACCATGCAGGCCCTGTCCGGCCACCCGGTTCACCTGGACTTGCTCGACCCGGCTGCTGAAGCCGCAATGGGC CACATCGAACTGGCCAAATGGGCCGATTTGGTGCTGATCGCCCCGGCGACCGCCGACTTGTTGGCCCGTCTGGCCCAAGG CATTGCCAACGACCTGCTGACCACGCTGGTGCTGGCCACCGATGCTATCGTCGCGGTCGCTCCGGCCATGAACCAGGCCA TGTGGCGCGACCCGGCGACCCAGGCCAACCTGCAACTCCTTGAAAGTCGCGGCCTGAAGACCTTCGGCCCGGCCTCCGGC AGCCAGGCCTGCGGCGACGTCGGCATGGGCCGGATGATGGAAGCCACCGATCTGGCGCAGTGCGCGGCAGACTGCTTCCA GCGTCAGGCACTGACCGGCAAGCACGTGGTGATCACCGCCGGCCCGACCCAGGAAAACATCGACCCGGTGCGCTACATCA CCAACCACAGCTCCGGGAAAATGGGCTTTGCCCTCGCCGAAGCCGCGGTGGAAGCCGGCGCCCGTGTGACCCTGATCAGC GGCCCGGTGCACCTGCCGACGCCAGATCGCGTCACGCGCATCGATGTGGTCAGCGCCCGCGACATGCTGGCGGCGTGCGA ATCAGCCATCCCGTGCGATGTGTTCATCGCCTCGGCCGCGGTGGCGGACTACCGTCCGGAAGTCGTTGCCCCGCAAAAAC TCAAGAAAGACCCTACAAGCGGCGACGGCTTCGTCCTGCAAATGGTGCGTAACCCGGACATCCTGGCCACCATAGCGACC CGTCCCGACCGTCCGTTCAGTGTGGGCTTCGCCGCCGAGACCGAACACCTGCTCGACTACGCTGCACGCAAGCTGAAAGA CAAGAATCTCGATTTGATCGTCGCCAACGACGTGGCCAATCCGAGCATCGGTTTCAACAGCGAAGAAAACGCCTGCAGCG TGATCGACCGTGAGCTTCACGCCACCGTTTTCGCCCAGACCAGCAAGAGCAAGATCGCTCGCCAACTGGTCACTTTTATC GCCGAACGTCTGAACCAGGTTTAA
Upstream 100 bases:
>100_bases CGCCGCTGTTCCGTAGCGGTCGCTGTGATATCGTAGCCCATCTTTTTTGCGGGCGAATTCACTCTGGGGAGGGGGTTTCG CCACGTATGTCACCAACGAA
Downstream 100 bases:
>100_bases TTTACATGCACGCTTTGCAAGCCAAGATCCTCGACCCACGCATCGGTACCGAATTCCCGCTGCCGCAATACGCCACACCG GGCTCCGCCGGCCTCGACCT
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKGRPMQRLYRKRIVLGVGGGIAAYKSADLVRRLIDQGAEVRVVMTRGGSEFITPLTMQALSGHPVHLDLLDPAAEAAMG HIELAKWADLVLIAPATADLLARLAQGIANDLLTTLVLATDAIVAVAPAMNQAMWRDPATQANLQLLESRGLKTFGPASG SQACGDVGMGRMMEATDLAQCAADCFQRQALTGKHVVITAGPTQENIDPVRYITNHSSGKMGFALAEAAVEAGARVTLIS GPVHLPTPDRVTRIDVVSARDMLAACESAIPCDVFIASAAVADYRPEVVAPQKLKKDPTSGDGFVLQMVRNPDILATIAT RPDRPFSVGFAAETEHLLDYAARKLKDKNLDLIVANDVANPSIGFNSEENACSVIDRELHATVFAQTSKSKIARQLVTFI AERLNQV
Sequences:
>Translated_407_residues MKGRPMQRLYRKRIVLGVGGGIAAYKSADLVRRLIDQGAEVRVVMTRGGSEFITPLTMQALSGHPVHLDLLDPAAEAAMG HIELAKWADLVLIAPATADLLARLAQGIANDLLTTLVLATDAIVAVAPAMNQAMWRDPATQANLQLLESRGLKTFGPASG SQACGDVGMGRMMEATDLAQCAADCFQRQALTGKHVVITAGPTQENIDPVRYITNHSSGKMGFALAEAAVEAGARVTLIS GPVHLPTPDRVTRIDVVSARDMLAACESAIPCDVFIASAAVADYRPEVVAPQKLKKDPTSGDGFVLQMVRNPDILATIAT RPDRPFSVGFAAETEHLLDYAARKLKDKNLDLIVANDVANPSIGFNSEENACSVIDRELHATVFAQTSKSKIARQLVTFI AERLNQV >Mature_407_residues MKGRPMQRLYRKRIVLGVGGGIAAYKSADLVRRLIDQGAEVRVVMTRGGSEFITPLTMQALSGHPVHLDLLDPAAEAAMG HIELAKWADLVLIAPATADLLARLAQGIANDLLTTLVLATDAIVAVAPAMNQAMWRDPATQANLQLLESRGLKTFGPASG SQACGDVGMGRMMEATDLAQCAADCFQRQALTGKHVVITAGPTQENIDPVRYITNHSSGKMGFALAEAAVEAGARVTLIS GPVHLPTPDRVTRIDVVSARDMLAACESAIPCDVFIASAAVADYRPEVVAPQKLKKDPTSGDGFVLQMVRNPDILATIAT RPDRPFSVGFAAETEHLLDYAARKLKDKNLDLIVANDVANPSIGFNSEENACSVIDRELHATVFAQTSKSKIARQLVTFI AERLNQV
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=173, Percent_Identity=34.1040462427746, Blast_Score=89, Evalue=5e-18, Organism=Escherichia coli, GI87082301, Length=367, Percent_Identity=59.4005449591281, Blast_Score=409, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17560194, Length=174, Percent_Identity=31.0344827586207, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322762, Length=206, Percent_Identity=28.6407766990291, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI24657262, Length=187, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43464; Mature: 43464
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRPMQRLYRKRIVLGVGGGIAAYKSADLVRRLIDQGAEVRVVMTRGGSEFITPLTMQA CCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH LSGHPVHLDLLDPAAEAAMGHIELAKWADLVLIAPATADLLARLAQGIANDLLTTLVLAT CCCCCEEEEECCHHHHHHHCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH DAIVAVAPAMNQAMWRDPATQANLQLLESRGLKTFGPASGSQACGDVGMGRMMEATDLAQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHH CAADCFQRQALTGKHVVITAGPTQENIDPVRYITNHSSGKMGFALAEAAVEAGARVTLIS HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHCCCEEEEEE GPVHLPTPDRVTRIDVVSARDMLAACESAIPCDVFIASAAVADYRPEVVAPQKLKKDPTS CCEECCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCC GDGFVLQMVRNPDILATIATRPDRPFSVGFAAETEHLLDYAARKLKDKNLDLIVANDVAN CCCEEEEEECCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC PSIGFNSEENACSVIDRELHATVFAQTSKSKIARQLVTFIAERLNQV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKGRPMQRLYRKRIVLGVGGGIAAYKSADLVRRLIDQGAEVRVVMTRGGSEFITPLTMQA CCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH LSGHPVHLDLLDPAAEAAMGHIELAKWADLVLIAPATADLLARLAQGIANDLLTTLVLAT CCCCCEEEEECCHHHHHHHCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH DAIVAVAPAMNQAMWRDPATQANLQLLESRGLKTFGPASGSQACGDVGMGRMMEATDLAQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHH CAADCFQRQALTGKHVVITAGPTQENIDPVRYITNHSSGKMGFALAEAAVEAGARVTLIS HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHCCCEEEEEE GPVHLPTPDRVTRIDVVSARDMLAACESAIPCDVFIASAAVADYRPEVVAPQKLKKDPTS CCEECCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCC GDGFVLQMVRNPDILATIATRPDRPFSVGFAAETEHLLDYAARKLKDKNLDLIVANDVAN CCCEEEEEECCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC PSIGFNSEENACSVIDRELHATVFAQTSKSKIARQLVTFIAERLNQV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]