| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is xpt [H]
Identifier: 77461741
GI number: 77461741
Start: 6189628
End: 6190200
Strand: Direct
Name: xpt [H]
Synonym: Pfl01_5520
Alternate gene names: 77461741
Gene position: 6189628-6190200 (Clockwise)
Preceding gene: 77461740
Following gene: 77461748
Centisome position: 96.14
GC content: 60.38
Gene sequence:
>573_bases ATGGAAGCATTGCACCAGAAAATCCGCGAACAAGGCATTGTGCTTTCCGACCAGGTCCTGAAGGTCGACGCCTTCCTGAA CCACCAGATCGACCCGGCCCTGATGAAGCTGATCGGCGACGAATTCGCCACGCTGTTCAAGGATTCGGGCATCACCAAGA TTGTCACCATCGAAGCCTCGGGCATCGCGCCGGCGATCATGACCGGTCTGAACCTCGGCGTGCCGGTGATCTTCGCCCGC AAGCAACAGTCCCTGACCCTGACTGAAAACCTGCTGTCGGCGACCGTTTACTCGTTCACCAAGAAAACCGAAAGCACCGT GGCCATCTCCCCTCGCCACCTGACCAGCAGCGACCGTGTGCTGATCATCGACGACTTCCTGGCCAACGGTAAGGCCTCCC AGGCGCTGATCTCGATCATCAAGCAGGCCGGCGCCACCGTCGCGGGCCTGGGCATCGTGATCGAGAAGTCGTTCCAGGGC GGCCGTGCGGAGCTGGATTCGCAGGGTTACCGCGTCGAGTCGCTGGCTCGCGTGAAGTCGCTGAAGGATGGCGTGGTTAC CTTCATCGAGTAA
Upstream 100 bases:
>100_bases CAACAGCGCACTGGCTGATATACGCGCGATGTTAAAGCGCTAGAATTGACCACTTTTTACTAGACCTTCGGCGCACAAAG CGCCAAATGAGGACAGCTTC
Downstream 100 bases:
>100_bases CCCGGCTTCATCGCATTATCCCTGTGGGAGCGGGCTTGCTCGCGAAGGCGTTGTGTCAGTCAAAGTATAGGTCGACTGAC ACGGCGTCTTCGCGAGCAAG
Product: xanthine phosphoribosyltransferase
Products: NA
Alternate protein names: XPRTase [H]
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MEALHQKIREQGIVLSDQVLKVDAFLNHQIDPALMKLIGDEFATLFKDSGITKIVTIEASGIAPAIMTGLNLGVPVIFAR KQQSLTLTENLLSATVYSFTKKTESTVAISPRHLTSSDRVLIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQG GRAELDSQGYRVESLARVKSLKDGVVTFIE
Sequences:
>Translated_190_residues MEALHQKIREQGIVLSDQVLKVDAFLNHQIDPALMKLIGDEFATLFKDSGITKIVTIEASGIAPAIMTGLNLGVPVIFAR KQQSLTLTENLLSATVYSFTKKTESTVAISPRHLTSSDRVLIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQG GRAELDSQGYRVESLARVKSLKDGVVTFIE >Mature_190_residues MEALHQKIREQGIVLSDQVLKVDAFLNHQIDPALMKLIGDEFATLFKDSGITKIVTIEASGIAPAIMTGLNLGVPVIFAR KQQSLTLTENLLSATVYSFTKKTESTVAISPRHLTSSDRVLIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQG GRAELDSQGYRVESLARVKSLKDGVVTFIE
Specific function: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XPT subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR010079 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 20454; Mature: 20454
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALHQKIREQGIVLSDQVLKVDAFLNHQIDPALMKLIGDEFATLFKDSGITKIVTIEAS CHHHHHHHHHCCCEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECC GIAPAIMTGLNLGVPVIFARKQQSLTLTENLLSATVYSFTKKTESTVAISPRHLTSSDRV CCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCE LIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQGGRAELDSQGYRVESLARVKS EEEECCCCCCCHHHHHHHHHHHHCCCEEEHEEEEEECCCCCCCCCCCCCCHHHHHHHHHH LKDGVVTFIE HHCCEEEECC >Mature Secondary Structure MEALHQKIREQGIVLSDQVLKVDAFLNHQIDPALMKLIGDEFATLFKDSGITKIVTIEAS CHHHHHHHHHCCCEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECC GIAPAIMTGLNLGVPVIFARKQQSLTLTENLLSATVYSFTKKTESTVAISPRHLTSSDRV CCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCE LIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQGGRAELDSQGYRVESLARVKS EEEECCCCCCCHHHHHHHHHHHHCCCEEEHEEEEEECCCCCCCCCCCCCCHHHHHHHHHH LKDGVVTFIE HHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA