| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fbpB2 [H]
Identifier: 77461650
GI number: 77461650
Start: 6095941
End: 6097608
Strand: Reverse
Name: fbpB2 [H]
Synonym: Pfl01_5429
Alternate gene names: 77461650
Gene position: 6097608-6095941 (Counterclockwise)
Preceding gene: 77461651
Following gene: 77461649
Centisome position: 94.71
GC content: 63.67
Gene sequence:
>1668_bases ATGTGTGCCCACGCAAAACGTGGGCACAATCATTTGAACGAGACTGTTTCCTTGGCCCACCCCGCCCAACGCCGCTGGTA CCCCATCGTCTTCGCCATCGCCGCGTTGGTGCTGCTCCCCCTCAGCGTGCTCCTGCTCTCATGGCAAACCATCGACCACC AGATCTGGTCGCACCTGTGGGAAACCCAGATGCCACGCCTGCTGGGCAACACACTGACGCTGGTTTTCGGCGTCGGCGTC GGTGTGACACTGATCGGCGTAAGCCTCGCCTGGCTCACCAGCCTCTGCGAATTCCCCGGCCGCCGCTGGCTCGACTGGGC GCTGATGCTGCCGTTCGCAATCCCGGCCTACGTGCTGGCGTTCGTGTTCGTCGGCCTGCTGGATTTCGCAGGCCCGGTAC AAACCCTGCTGCGAGAATGGTTCGGCACCGGCCTGCGCCTGCCGCGAGTGCGCTCCACCGGTGGCGTGATTCTGGTGTTG GTGCTGGTGTTTTATCCCTATGTCTACCTGTTGGCGCGTACTGCGTTCCTGGCTCAGGGCAAGGGCCTGATGGAAGCCGC GCGAGTGCTCGGCCAGTCACCGTGGCAGGCGTTCTGGCGTGTGGCATTGCCGATGGCGCGGCCCGCCATCGGTGCCGGCG TGGCGCTGGCGTTGATGGAAACCCTGGCGGATTTCGGTGCGGTGTCGGTGTTCAACTTCGACACCTTCACCACCGCGATC TACAAGACCTGGTACGGCTTCTTCAGCCTGCCAAGCGCCGCGCAACTGGCCAGCCTGTTGCTGCTGGTGGTGATGCTGGT GCTGTACGGCGAACGTCGCGCGCGCGGCGCCAATCGGGCAAGTAATGAACGGCCACGGGTCAAGGCGCTGTATCACCTGC GCGGGCCCAAGGCCTGGGCAGCGACAGGTTGGTGCGGTCTGGTATTCGCCTGTGCGTTTGTCATTCCGGTGCTGCAACTG ATGGTGTGGTTCTGGCAGCGCGGGCGATTCGATCTGGATGAACGCTATGCGGGGCTGATTCTCCATACGCTCTATCTGGG CGGCATGGCGGCGCTGATCACGGTCAGCGTGGCGATGTTGCTGGCATTCGCCCGGCGTCTGGCGCCCACCCGGGCGATCA ATTCCGCAGTCGGTCTGGCCAATCTCGGTTATGCCTTGCCGGGTTCGGTGCTGGCGGTGTCGATCATGCTCGCGTTCAGT TATCTGGACCGGGAGCTGGTGATTCCGCTGTCCGGCTGGCTCGGCAGTGCTGGCAAACCGTTGCTGCTGGGCAGTCTGGC GGCGCTGCTGCTGGCGTATCTGGTGCGTTTCGTGGCGGTGGCCTATGGGCCTCTGGAAAGCAGTCTGGCGCGTATACGGC CCTCTTTGCCTGAAGCGGCACGTAGCCTGGGTGTCAGTGGGCCGCGACTGTTTTTCAAAGTGTATCTGCCGTTGCTGCTG CCCGGCACGCTCAGCGCCGCGCTGCTGGTGTTCGTCGACGTGCTCAAGGAAATGCCCGCCACCCTGCTGATGCGCCCGTT TGGCTGGGACACACTGGCGGTGCGGATCTTCGAAATGACCAGCGAAGGCGAATGGGCGAGGGCGTCGTTGCCGGCGTTGA CCCTGGTGCTGGTCGGTCTGTTGCCGGTCATCGGACTTATTCGCCGTTCGGCGCATCGAAACACTTAG
Upstream 100 bases:
>100_bases TTGATCGTTCCCACGTCGAGGCGTCGAACCGTCTGCGTGGGAATGCAGTCCCCGACGCTCTGCGTCGCATCATCGACAGC GTGACGCGGAGCGTCACAGA
Downstream 100 bases:
>100_bases TCGTCAGTCCTGAATCATGCGGCTACAATGCGCGGCATTCGGTGCGGTCCGTCTGACAGACCCTGTCGCTGAAATCGGCT GAAAGCCCTTTTTTACAGGG
Product: binding-protein dependent transport system inner membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MCAHAKRGHNHLNETVSLAHPAQRRWYPIVFAIAALVLLPLSVLLLSWQTIDHQIWSHLWETQMPRLLGNTLTLVFGVGV GVTLIGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFAGPVQTLLREWFGTGLRLPRVRSTGGVILVL VLVFYPYVYLLARTAFLAQGKGLMEAARVLGQSPWQAFWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAI YKTWYGFFSLPSAAQLASLLLLVVMLVLYGERRARGANRASNERPRVKALYHLRGPKAWAATGWCGLVFACAFVIPVLQL MVWFWQRGRFDLDERYAGLILHTLYLGGMAALITVSVAMLLAFARRLAPTRAINSAVGLANLGYALPGSVLAVSIMLAFS YLDRELVIPLSGWLGSAGKPLLLGSLAALLLAYLVRFVAVAYGPLESSLARIRPSLPEAARSLGVSGPRLFFKVYLPLLL PGTLSAALLVFVDVLKEMPATLLMRPFGWDTLAVRIFEMTSEGEWARASLPALTLVLVGLLPVIGLIRRSAHRNT
Sequences:
>Translated_555_residues MCAHAKRGHNHLNETVSLAHPAQRRWYPIVFAIAALVLLPLSVLLLSWQTIDHQIWSHLWETQMPRLLGNTLTLVFGVGV GVTLIGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFAGPVQTLLREWFGTGLRLPRVRSTGGVILVL VLVFYPYVYLLARTAFLAQGKGLMEAARVLGQSPWQAFWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAI YKTWYGFFSLPSAAQLASLLLLVVMLVLYGERRARGANRASNERPRVKALYHLRGPKAWAATGWCGLVFACAFVIPVLQL MVWFWQRGRFDLDERYAGLILHTLYLGGMAALITVSVAMLLAFARRLAPTRAINSAVGLANLGYALPGSVLAVSIMLAFS YLDRELVIPLSGWLGSAGKPLLLGSLAALLLAYLVRFVAVAYGPLESSLARIRPSLPEAARSLGVSGPRLFFKVYLPLLL PGTLSAALLVFVDVLKEMPATLLMRPFGWDTLAVRIFEMTSEGEWARASLPALTLVLVGLLPVIGLIRRSAHRNT >Mature_555_residues MCAHAKRGHNHLNETVSLAHPAQRRWYPIVFAIAALVLLPLSVLLLSWQTIDHQIWSHLWETQMPRLLGNTLTLVFGVGV GVTLIGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLAFVFVGLLDFAGPVQTLLREWFGTGLRLPRVRSTGGVILVL VLVFYPYVYLLARTAFLAQGKGLMEAARVLGQSPWQAFWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAI YKTWYGFFSLPSAAQLASLLLLVVMLVLYGERRARGANRASNERPRVKALYHLRGPKAWAATGWCGLVFACAFVIPVLQL MVWFWQRGRFDLDERYAGLILHTLYLGGMAALITVSVAMLLAFARRLAPTRAINSAVGLANLGYALPGSVLAVSIMLAFS YLDRELVIPLSGWLGSAGKPLLLGSLAALLLAYLVRFVAVAYGPLESSLARIRPSLPEAARSLGVSGPRLFFKVYLPLLL PGTLSAALLVFVDVLKEMPATLLMRPFGWDTLAVRIFEMTSEGEWARASLPALTLVLVGLLPVIGLIRRSAHRNT
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=179, Percent_Identity=35.195530726257, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788764, Length=177, Percent_Identity=29.9435028248588, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 60889; Mature: 60889
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAHAKRGHNHLNETVSLAHPAQRRWYPIVFAIAALVLLPLSVLLLSWQTIDHQIWSHLW CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETQMPRLLGNTLTLVFGVGVGVTLIGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FVFVGLLDFAGPVQTLLREWFGTGLRLPRVRSTGGVILVLVLVFYPYVYLLARTAFLAQG HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC KGLMEAARVLGQSPWQAFWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAI CCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHH YKTWYGFFSLPSAAQLASLLLLVVMLVLYGERRARGANRASNERPRVKALYHLRGPKAWA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHCCCCCHH ATGWCGLVFACAFVIPVLQLMVWFWQRGRFDLDERYAGLILHTLYLGGMAALITVSVAML HCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAFARRLAPTRAINSAVGLANLGYALPGSVLAVSIMLAFSYLDRELVIPLSGWLGSAGKP HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCH LLLGSLAALLLAYLVRFVAVAYGPLESSLARIRPSLPEAARSLGVSGPRLFFKVYLPLLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHH PGTLSAALLVFVDVLKEMPATLLMRPFGWDTLAVRIFEMTSEGEWARASLPALTLVLVGL HHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LPVIGLIRRSAHRNT HHHHHHHHHHHCCCC >Mature Secondary Structure MCAHAKRGHNHLNETVSLAHPAQRRWYPIVFAIAALVLLPLSVLLLSWQTIDHQIWSHLW CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETQMPRLLGNTLTLVFGVGVGVTLIGVSLAWLTSLCEFPGRRWLDWALMLPFAIPAYVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FVFVGLLDFAGPVQTLLREWFGTGLRLPRVRSTGGVILVLVLVFYPYVYLLARTAFLAQG HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC KGLMEAARVLGQSPWQAFWRVALPMARPAIGAGVALALMETLADFGAVSVFNFDTFTTAI CCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHH YKTWYGFFSLPSAAQLASLLLLVVMLVLYGERRARGANRASNERPRVKALYHLRGPKAWA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHCCCCCHH ATGWCGLVFACAFVIPVLQLMVWFWQRGRFDLDERYAGLILHTLYLGGMAALITVSVAML HCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAFARRLAPTRAINSAVGLANLGYALPGSVLAVSIMLAFSYLDRELVIPLSGWLGSAGKP HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCH LLLGSLAALLLAYLVRFVAVAYGPLESSLARIRPSLPEAARSLGVSGPRLFFKVYLPLLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHH PGTLSAALLVFVDVLKEMPATLLMRPFGWDTLAVRIFEMTSEGEWARASLPALTLVLVGL HHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LPVIGLIRRSAHRNT HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]