| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461651
Identifier: 77461651
GI number: 77461651
Start: 6097729
End: 6098733
Strand: Reverse
Name: 77461651
Synonym: Pfl01_5430
Alternate gene names: NA
Gene position: 6098733-6097729 (Counterclockwise)
Preceding gene: 77461652
Following gene: 77461650
Centisome position: 94.72
GC content: 61.39
Gene sequence:
>1005_bases ATGTTGGCATCCAAGCGTGTTCTGACCGCACTGGCCCTGACCCTGATCGGCAGCACTGCCGCCCAGGCCGCCGACGAGGT GGTGGTCTACTCCTCGCGTATCGATGAACTGATCAAACCGGTGTTCGATGCCTACACCGCCAAGACCGGGGTGAAGATCA AGTTCATCACCGACAAGGAAGCGCCGCTGATGCAGCGGATCAAGGCCGAAGGCGAGAACGCCACCGCCGACCTGCTGCTG ACCGTCGATGCCGGCAACCTCTGGCAGGCCGAGCAGATGGGCATTCTCCAGCCGTTCACTTCGAAAACCATCGACGCCAA CATTCCCCTGCAATATCGCTCGTCCAGCCACGCCTGGACCGGACTGAGCCTGCGCGCACGGACCATCGCCTATTCCACCG AACGGGTGAAGCCGGGCGAGCTGACGACCTACGAAGCATTGGCCGACAAGAACTGGGAAGGCCGCCTGTGCCTGCGCACG GCGAAGAAGGTCTACAACCAGTCGCTGACCGCCACCATGATCGAAGTGCATGGCGCCGAGAAGACCGAGCAGATCCTCAA GGGCTGGGTCAACAACCTGTCCACCGACGTGTTCTCCGACGACGTCGCGGTGCTGGAAGCGATCAACGCCGGCCAGTGCG ATGTCGGCATCGTCAACACTTATTACTACGGCCGCCTGCACAAGCAGAAGCCGGAACTGCCGGTAAAACTGTTCTGGCCG AATCAGGCGGATCGTGGTGTACACGTCAACCTGTCGGGCATCGGCCTGACCAAACATGCGCCGCACCCGGAAGCGGCCAA GGCGCTGGTGGAGTGGATGACCACGCCTGAAGCGCAGAAGATCTTTGCCGATGTGAACCAGGAGTTCCCGGCGAATCCAG CGGTGAAGCCTTCGGAAGAAGTGGCGGCGTGGGGGCAGTTCGTAGCCGATACATTGCCGGTTGAAGTGGCAGGCAAGCGT CAGGCCGAAGCGATCCGGATGATGGATCGGGCGGGTTGGAATTGA
Upstream 100 bases:
>100_bases CGTGCAACATCTGGTAACTCCTTGAGAAAGTGATCGATTGAGCTGGTAAATGTGAGTCCTTATCATTTGGGCCACTTTTC CCGACCGAGAGACCGCTCCC
Downstream 100 bases:
>100_bases GTCTTTCCTGACAGCAATGTTTGATCGTTCCCACGTCGAGGCGTCGAACCGTCTGCGTGGGAATGCAGTCCCCGACGCTC TGCGTCGCATCATCGACAGC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLASKRVLTALALTLIGSTAAQAADEVVVYSSRIDELIKPVFDAYTAKTGVKIKFITDKEAPLMQRIKAEGENATADLLL TVDAGNLWQAEQMGILQPFTSKTIDANIPLQYRSSSHAWTGLSLRARTIAYSTERVKPGELTTYEALADKNWEGRLCLRT AKKVYNQSLTATMIEVHGAEKTEQILKGWVNNLSTDVFSDDVAVLEAINAGQCDVGIVNTYYYGRLHKQKPELPVKLFWP NQADRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVKPSEEVAAWGQFVADTLPVEVAGKR QAEAIRMMDRAGWN
Sequences:
>Translated_334_residues MLASKRVLTALALTLIGSTAAQAADEVVVYSSRIDELIKPVFDAYTAKTGVKIKFITDKEAPLMQRIKAEGENATADLLL TVDAGNLWQAEQMGILQPFTSKTIDANIPLQYRSSSHAWTGLSLRARTIAYSTERVKPGELTTYEALADKNWEGRLCLRT AKKVYNQSLTATMIEVHGAEKTEQILKGWVNNLSTDVFSDDVAVLEAINAGQCDVGIVNTYYYGRLHKQKPELPVKLFWP NQADRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVKPSEEVAAWGQFVADTLPVEVAGKR QAEAIRMMDRAGWN >Mature_334_residues MLASKRVLTALALTLIGSTAAQAADEVVVYSSRIDELIKPVFDAYTAKTGVKIKFITDKEAPLMQRIKAEGENATADLLL TVDAGNLWQAEQMGILQPFTSKTIDANIPLQYRSSSHAWTGLSLRARTIAYSTERVKPGELTTYEALADKNWEGRLCLRT AKKVYNQSLTATMIEVHGAEKTEQILKGWVNNLSTDVFSDDVAVLEAINAGQCDVGIVNTYYYGRLHKQKPELPVKLFWP NQADRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVKPSEEVAAWGQFVADTLPVEVAGKR QAEAIRMMDRAGWN
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36765; Mature: 36765
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASKRVLTALALTLIGSTAAQAADEVVVYSSRIDELIKPVFDAYTAKTGVKIKFITDKE CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCC APLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPFTSKTIDANIPLQYRSSSHAWT CHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCEE GLSLRARTIAYSTERVKPGELTTYEALADKNWEGRLCLRTAKKVYNQSLTATMIEVHGAE CCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEEEECCCH KTEQILKGWVNNLSTDVFSDDVAVLEAINAGQCDVGIVNTYYYGRLHKQKPELPVKLFWP HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEHEEECEEECCCCCCCEEEECC NQADRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVKPSEE CCCCCCEEEEEECEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHH VAAWGQFVADTLPVEVAGKRQAEAIRMMDRAGWN HHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure MLASKRVLTALALTLIGSTAAQAADEVVVYSSRIDELIKPVFDAYTAKTGVKIKFITDKE CCCCHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCC APLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPFTSKTIDANIPLQYRSSSHAWT CHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCEE GLSLRARTIAYSTERVKPGELTTYEALADKNWEGRLCLRTAKKVYNQSLTATMIEVHGAE CCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEEEECCCH KTEQILKGWVNNLSTDVFSDDVAVLEAINAGQCDVGIVNTYYYGRLHKQKPELPVKLFWP HHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEHEEECEEECCCCCCCEEEECC NQADRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVKPSEE CCCCCCEEEEEECEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHH VAAWGQFVADTLPVEVAGKRQAEAIRMMDRAGWN HHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]