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The map label for this gene is glcD [H]

Identifier: 77461607

GI number: 77461607

Start: 6048760

End: 6050178

Strand: Reverse

Name: glcD [H]

Synonym: Pfl01_5386

Alternate gene names: 77461607

Gene position: 6050178-6048760 (Counterclockwise)

Preceding gene: 77461609

Following gene: 77461606

Centisome position: 93.97

GC content: 59.34

Gene sequence:

>1419_bases
ATGAATTGTTCGAGAGTTCCGTCGATGACCAATCCTGCCCTGATTGATGAACTGAAGACCCTGGTCGAGCCTGGCAAAGT
CCTGACCGATGCCGACTCCTTGAACGCTTACGGCAAGGACTGGACCAAACACTTCGCCCCGGCGCCCAGCGCCATCGTGT
TTCCCAAGACCATCGAGCAGGTGCAGGCCGTCGTCCGCTGGGCCAACGAACACAAAGTGGCGCTGGTGCCGTCGGGCGGG
CGCACGGGGCTCTCCGCCGCAGCCGTGGCGGCCAATGGCGAAGTGGTCGTGTCGTTCGACTACATGAACCAGATTCTCGA
CATCAACCTGACCGACCGCACCGCCGTCTGTCAGCCGGGCGTGGTCACCGAGCAATTGCAGAACGCGGCCGAAGAACATG
ACTTGTACTACCCGGTGGACTTCGCTTCGGCCGGTTCCAGTCAGATTGGCGGCAACATCGGCACCAATGCCGGCGGGATC
AAGGTCATTCGCTACGGCATGACCCGCAACTGGGTCGCAGGCATGAAAGTCGTGACCGGCAAGGGCGATGTGCTGGAACT
GAACAAAGACCTGATCAAGAACGCCACCGGATATGACCTGCGCCAGCTGTTCATCGGCGCCGAAGGCACCCTGGGTTTCG
TGGTCGAGGCCACCATGCGTCTGGACCGTGCGCCGAAAAACCTGACCGCAATGGTCCTCGGCACCGCCGATTTCGATTCA
ATCATGCCGGTACTGCACGCCTTTCAGGGCCGGCTCGACCTGACTGCGTTCGAATTCTTCTCCGACAAGGCCCTGGCCAA
GGTCATGGGCCGTGGCGATGTCCCGGCGCCGTTCGAAACCGACTGCCCGTTCTATGCCTTGCTGGAATTCGAGGCGACCA
CCGAAGAAGTGGCCAACACCGCCCTGGAAACCTTCGAACACTGCGTGGAGCAGGGTTGGGTGCTGGACGGCGTGATGAGC
CAGAGCGAAACCCAGTTGCAGAACCTGTGGAAGCTGCGCGAGTACATCTCCGAAACCATCTCCCACTGGACACCGTACAA
GAACGACATCTCGGTCACCGTCTCGAAAGTCCCTGCATTTTTGCAGGAAATCGATGCGATCGTCGGCGAACATTACCCGG
ATTTCGAAATCGTCTGGTTCGGCCACATCGGCGACGGCAACCTGCACCTGAACATCCTCAAGCCGGACAACCTGAGCAAG
GACGAGTTTTTCGCCAAGTGCGCCACCGTCAACAAGTGGGTGTTCGAAACCGTCGAGAAGTACAACGGTTCGATTTCTGC
CGAACACGGCGTGGGCATGACCAAGCGCGACTACTTGACCTACAGCCGCTCGCCGGTGGAAATCGAATACATGAAAGCGG
TCAAGGCGGTGTTCGACCCGAACGGCATCATGAACCCGGGCAAGATTTTCGCGGTTTGA

Upstream 100 bases:

>100_bases
GCAGAACCGGCCTTGGGCACTGGCCTGCGGGGTCGGTATGCTAGCATAGCCACCCCGCTAAACACTCATTCCTGCGACGT
GAAGCGTTCTCAGGATGACC

Downstream 100 bases:

>100_bases
TTGGCAATCCCTGATGAATCAATAAAGGCAGGAGTCGGTAATGAGCTATCAGCACCAGTATGTCGACGGTACGCGGATTC
ATTTTCCGCTGGGGAAAGTG

Product: FAD linked oxidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNCSRVPSMTNPALIDELKTLVEPGKVLTDADSLNAYGKDWTKHFAPAPSAIVFPKTIEQVQAVVRWANEHKVALVPSGG
RTGLSAAAVAANGEVVVSFDYMNQILDINLTDRTAVCQPGVVTEQLQNAAEEHDLYYPVDFASAGSSQIGGNIGTNAGGI
KVIRYGMTRNWVAGMKVVTGKGDVLELNKDLIKNATGYDLRQLFIGAEGTLGFVVEATMRLDRAPKNLTAMVLGTADFDS
IMPVLHAFQGRLDLTAFEFFSDKALAKVMGRGDVPAPFETDCPFYALLEFEATTEEVANTALETFEHCVEQGWVLDGVMS
QSETQLQNLWKLREYISETISHWTPYKNDISVTVSKVPAFLQEIDAIVGEHYPDFEIVWFGHIGDGNLHLNILKPDNLSK
DEFFAKCATVNKWVFETVEKYNGSISAEHGVGMTKRDYLTYSRSPVEIEYMKAVKAVFDPNGIMNPGKIFAV

Sequences:

>Translated_472_residues
MNCSRVPSMTNPALIDELKTLVEPGKVLTDADSLNAYGKDWTKHFAPAPSAIVFPKTIEQVQAVVRWANEHKVALVPSGG
RTGLSAAAVAANGEVVVSFDYMNQILDINLTDRTAVCQPGVVTEQLQNAAEEHDLYYPVDFASAGSSQIGGNIGTNAGGI
KVIRYGMTRNWVAGMKVVTGKGDVLELNKDLIKNATGYDLRQLFIGAEGTLGFVVEATMRLDRAPKNLTAMVLGTADFDS
IMPVLHAFQGRLDLTAFEFFSDKALAKVMGRGDVPAPFETDCPFYALLEFEATTEEVANTALETFEHCVEQGWVLDGVMS
QSETQLQNLWKLREYISETISHWTPYKNDISVTVSKVPAFLQEIDAIVGEHYPDFEIVWFGHIGDGNLHLNILKPDNLSK
DEFFAKCATVNKWVFETVEKYNGSISAEHGVGMTKRDYLTYSRSPVEIEYMKAVKAVFDPNGIMNPGKIFAV
>Mature_472_residues
MNCSRVPSMTNPALIDELKTLVEPGKVLTDADSLNAYGKDWTKHFAPAPSAIVFPKTIEQVQAVVRWANEHKVALVPSGG
RTGLSAAAVAANGEVVVSFDYMNQILDINLTDRTAVCQPGVVTEQLQNAAEEHDLYYPVDFASAGSSQIGGNIGTNAGGI
KVIRYGMTRNWVAGMKVVTGKGDVLELNKDLIKNATGYDLRQLFIGAEGTLGFVVEATMRLDRAPKNLTAMVLGTADFDS
IMPVLHAFQGRLDLTAFEFFSDKALAKVMGRGDVPAPFETDCPFYALLEFEATTEEVANTALETFEHCVEQGWVLDGVMS
QSETQLQNLWKLREYISETISHWTPYKNDISVTVSKVPAFLQEIDAIVGEHYPDFEIVWFGHIGDGNLHLNILKPDNLSK
DEFFAKCATVNKWVFETVEKYNGSISAEHGVGMTKRDYLTYSRSPVEIEYMKAVKAVFDPNGIMNPGKIFAV

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=455, Percent_Identity=36.043956043956, Blast_Score=290, Evalue=3e-78,
Organism=Homo sapiens, GI37595756, Length=471, Percent_Identity=29.2993630573248, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI37595754, Length=494, Percent_Identity=27.9352226720648, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI4501993, Length=186, Percent_Identity=27.9569892473118, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1789351, Length=480, Percent_Identity=29.375, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI48994907, Length=498, Percent_Identity=24.8995983935743, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787977, Length=501, Percent_Identity=23.9520958083832, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17534361, Length=452, Percent_Identity=31.6371681415929, Blast_Score=235, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI71992373, Length=473, Percent_Identity=25.5813953488372, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI71992381, Length=473, Percent_Identity=24.7357293868922, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI71992392, Length=381, Percent_Identity=25.9842519685039, Blast_Score=121, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=182, Percent_Identity=28.021978021978, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6320023, Length=472, Percent_Identity=34.5338983050847, Blast_Score=293, Evalue=5e-80,
Organism=Saccharomyces cerevisiae, GI6320764, Length=450, Percent_Identity=32.4444444444444, Blast_Score=253, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6320027, Length=465, Percent_Identity=24.7311827956989, Blast_Score=141, Evalue=2e-34,
Organism=Drosophila melanogaster, GI18921117, Length=452, Percent_Identity=32.0796460176991, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI24639277, Length=452, Percent_Identity=32.0796460176991, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI24639275, Length=452, Percent_Identity=32.0796460176991, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI24653753, Length=205, Percent_Identity=30.2439024390244, Blast_Score=90, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51897; Mature: 51897

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCSRVPSMTNPALIDELKTLVEPGKVLTDADSLNAYGKDWTKHFAPAPSAIVFPKTIEQ
CCCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHCCCCCHHHHHCCCCCCEEECHHHHHH
VQAVVRWANEHKVALVPSGGRTGLSAAAVAANGEVVVSFDYMNQILDINLTDRTAVCQPG
HHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEHHHHHEEEECCCCCCCCCCCC
VVTEQLQNAAEEHDLYYPVDFASAGSSQIGGNIGTNAGGIKVIRYGMTRNWVAGMKVVTG
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC
KGDVLELNKDLIKNATGYDLRQLFIGAEGTLGFVVEATMRLDRAPKNLTAMVLGTADFDS
CCCEEECCHHHHCCCCCCCHHHHEECCCCCEEHEEHHHHHHCCCCCCEEEEEEECCCHHH
IMPVLHAFQGRLDLTAFEFFSDKALAKVMGRGDVPAPFETDCPFYALLEFEATTEEVANT
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
ALETFEHCVEQGWVLDGVMSQSETQLQNLWKLREYISETISHWTPYKNDISVTVSKVPAF
HHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
LQEIDAIVGEHYPDFEIVWFGHIGDGNLHLNILKPDNLSKDEFFAKCATVNKWVFETVEK
HHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
YNGSISAEHGVGMTKRDYLTYSRSPVEIEYMKAVKAVFDPNGIMNPGKIFAV
HCCCEECCCCCCCCCHHCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEC
>Mature Secondary Structure
MNCSRVPSMTNPALIDELKTLVEPGKVLTDADSLNAYGKDWTKHFAPAPSAIVFPKTIEQ
CCCCCCCCCCCHHHHHHHHHHHCCCCEEECCHHHCCCCCHHHHHCCCCCCEEECHHHHHH
VQAVVRWANEHKVALVPSGGRTGLSAAAVAANGEVVVSFDYMNQILDINLTDRTAVCQPG
HHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEHHHHHEEEECCCCCCCCCCCC
VVTEQLQNAAEEHDLYYPVDFASAGSSQIGGNIGTNAGGIKVIRYGMTRNWVAGMKVVTG
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC
KGDVLELNKDLIKNATGYDLRQLFIGAEGTLGFVVEATMRLDRAPKNLTAMVLGTADFDS
CCCEEECCHHHHCCCCCCCHHHHEECCCCCEEHEEHHHHHHCCCCCCEEEEEEECCCHHH
IMPVLHAFQGRLDLTAFEFFSDKALAKVMGRGDVPAPFETDCPFYALLEFEATTEEVANT
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
ALETFEHCVEQGWVLDGVMSQSETQLQNLWKLREYISETISHWTPYKNDISVTVSKVPAF
HHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
LQEIDAIVGEHYPDFEIVWFGHIGDGNLHLNILKPDNLSKDEFFAKCATVNKWVFETVEK
HHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
YNGSISAEHGVGMTKRDYLTYSRSPVEIEYMKAVKAVFDPNGIMNPGKIFAV
HCCCEECCCCCCCCCHHCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]