| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461609
Identifier: 77461609
GI number: 77461609
Start: 6051651
End: 6052076
Strand: Reverse
Name: 77461609
Synonym: Pfl01_5388
Alternate gene names: NA
Gene position: 6052076-6051651 (Counterclockwise)
Preceding gene: 77461611
Following gene: 77461607
Centisome position: 94.0
GC content: 60.09
Gene sequence:
>426_bases ATGAAAAGCTTTATGTCACGTGCAGCGTTGGCCGGTGTGCTGATGGGTGTTTCGGTACTGGCCAGTGCGGCCACACCGGC ACCGAAGGGCGCCGAAGTGTTCATCGTTTCTCCCGAGGACGGAGCCACGGTTCAGCAGACCTTCACGGTCAAGTTCGGTG TAAAGGACATTGCGCTGGCACCGGCCGGTGACGTCACCAAGAACACTGGCCATCACCATCTGCTGATCGATGCCAAGGAA ATCGTTCCGGCCGGCTCCGTCGTGCCGACCGATGCCAACCACATGCACTTCGGCAAGGCGCAGACCCAGGCCGACATCAA ACTCGCGCCGGGCAAGCACACCTTGCAGCTGGAGTTGGGTGACAGCGGCCACATGGCCTTCGATCCGCCGATCGTGTCGA AGAAGATCACCGTCAACGTCGAATGA
Upstream 100 bases:
>100_bases TTCCAGGCTCGCTTTGCTATGGTTGTCGAGTGCCTTCGACAACGAATGGTCATGAAGTTGTCATGACCGTGCGGATTTTA CGGAAAAACTGGAGAAGAAA
Downstream 100 bases:
>100_bases CGTTTTCGCGTGCATTAAAAAGGGAGCCCGAAGGCTCCCTTTTTTTGTCGCTCAGCGACGGATCAGAACAACACACGGCT TCGGATGGTGCCGTTGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKSFMSRAALAGVLMGVSVLASAATPAPKGAEVFIVSPEDGATVQQTFTVKFGVKDIALAPAGDVTKNTGHHHLLIDAKE IVPAGSVVPTDANHMHFGKAQTQADIKLAPGKHTLQLELGDSGHMAFDPPIVSKKITVNVE
Sequences:
>Translated_141_residues MKSFMSRAALAGVLMGVSVLASAATPAPKGAEVFIVSPEDGATVQQTFTVKFGVKDIALAPAGDVTKNTGHHHLLIDAKE IVPAGSVVPTDANHMHFGKAQTQADIKLAPGKHTLQLELGDSGHMAFDPPIVSKKITVNVE >Mature_141_residues MKSFMSRAALAGVLMGVSVLASAATPAPKGAEVFIVSPEDGATVQQTFTVKFGVKDIALAPAGDVTKNTGHHHLLIDAKE IVPAGSVVPTDANHMHFGKAQTQADIKLAPGKHTLQLELGDSGHMAFDPPIVSKKITVNVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14660; Mature: 14660
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFMSRAALAGVLMGVSVLASAATPAPKGAEVFIVSPEDGATVQQTFTVKFGVKDIALA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCEEEEC PAGDVTKNTGHHHLLIDAKEIVPAGSVVPTDANHMHFGKAQTQADIKLAPGKHTLQLELG CCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCEECCCCCCCCEEEECCCCEEEEEEEC DSGHMAFDPPIVSKKITVNVE CCCCEEECCCCCCEEEEEEEC >Mature Secondary Structure MKSFMSRAALAGVLMGVSVLASAATPAPKGAEVFIVSPEDGATVQQTFTVKFGVKDIALA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCEEEEC PAGDVTKNTGHHHLLIDAKEIVPAGSVVPTDANHMHFGKAQTQADIKLAPGKHTLQLELG CCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCEECCCCCCCCEEEECCCCEEEEEEEC DSGHMAFDPPIVSKKITVNVE CCCCEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA