| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77461601
Identifier: 77461601
GI number: 77461601
Start: 6042998
End: 6043411
Strand: Reverse
Name: 77461601
Synonym: Pfl01_5380
Alternate gene names: NA
Gene position: 6043411-6042998 (Counterclockwise)
Preceding gene: 77461602
Following gene: 77461599
Centisome position: 93.87
GC content: 61.35
Gene sequence:
>414_bases ATGGAAACCCTGACCACCCTGAAAGTCCTTCACGTCGCGGCGACCGTGGTGATACTGGCGAGCGGGCTGGGGCTCGCCGC TGTTTCCTGGCGTAATCGCAGCGAGGGGCCGGCCAGCACGATGCAGCGACCCTGGTTGTTCGTCTGGTGTCTGATGCTGA TCGGCGTGCTCAGCATGCCTTTCACCGGCTGGTGGTTGGTGCACCTGATTGGCTGGCCGTTGGGACAGTTCTGGATTCTG GGGTCCAGCGTGATCTATGCCGTGGCCACATTCAGCGCGGTCTGGCTGCTTGTTCGGCTTAATCGGCTATGGACCAGCGG GGTCGGCAACCGGAAATTCAATCTGGCGCTGGCAATTGTCAGCGGCGTCGGATTTCTGGCCATTGCGGCGTTGATGGGGG CGAAGCCGGTTTAA
Upstream 100 bases:
>100_bases TCGGCTACCCATACTGGGACGAAAGCGACAACCCGGCCTATCAGCTGTTTCTTGGCTGAACGGCTACGCTGATGGGTATG GCCCAAGGAAAGAGAAATTC
Downstream 100 bases:
>100_bases GGCTTGGGACCGCGTCGACCCCGTTCGCGAGCAGGCTCGCTCCCACATTGATCTGACGCGTTCACAAATTCCTTGTGGGA GCTGGCCTTGCCAGCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMPFTGWWLVHLIGWPLGQFWIL GSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIVSGVGFLAIAALMGAKPV
Sequences:
>Translated_137_residues METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMPFTGWWLVHLIGWPLGQFWIL GSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIVSGVGFLAIAALMGAKPV >Mature_137_residues METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMPFTGWWLVHLIGWPLGQFWIL GSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIVSGVGFLAIAALMGAKPV
Specific function: Unknown
COG id: COG5528
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14907; Mature: 14907
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMP CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHCC FTGWWLVHLIGWPLGQFWILGSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIV CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SGVGFLAIAALMGAKPV HHHHHHHHHHHHCCCCC >Mature Secondary Structure METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMP CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHCC FTGWWLVHLIGWPLGQFWILGSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIV CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SGVGFLAIAALMGAKPV HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA