Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77461601

Identifier: 77461601

GI number: 77461601

Start: 6042998

End: 6043411

Strand: Reverse

Name: 77461601

Synonym: Pfl01_5380

Alternate gene names: NA

Gene position: 6043411-6042998 (Counterclockwise)

Preceding gene: 77461602

Following gene: 77461599

Centisome position: 93.87

GC content: 61.35

Gene sequence:

>414_bases
ATGGAAACCCTGACCACCCTGAAAGTCCTTCACGTCGCGGCGACCGTGGTGATACTGGCGAGCGGGCTGGGGCTCGCCGC
TGTTTCCTGGCGTAATCGCAGCGAGGGGCCGGCCAGCACGATGCAGCGACCCTGGTTGTTCGTCTGGTGTCTGATGCTGA
TCGGCGTGCTCAGCATGCCTTTCACCGGCTGGTGGTTGGTGCACCTGATTGGCTGGCCGTTGGGACAGTTCTGGATTCTG
GGGTCCAGCGTGATCTATGCCGTGGCCACATTCAGCGCGGTCTGGCTGCTTGTTCGGCTTAATCGGCTATGGACCAGCGG
GGTCGGCAACCGGAAATTCAATCTGGCGCTGGCAATTGTCAGCGGCGTCGGATTTCTGGCCATTGCGGCGTTGATGGGGG
CGAAGCCGGTTTAA

Upstream 100 bases:

>100_bases
TCGGCTACCCATACTGGGACGAAAGCGACAACCCGGCCTATCAGCTGTTTCTTGGCTGAACGGCTACGCTGATGGGTATG
GCCCAAGGAAAGAGAAATTC

Downstream 100 bases:

>100_bases
GGCTTGGGACCGCGTCGACCCCGTTCGCGAGCAGGCTCGCTCCCACATTGATCTGACGCGTTCACAAATTCCTTGTGGGA
GCTGGCCTTGCCAGCGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMPFTGWWLVHLIGWPLGQFWIL
GSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIVSGVGFLAIAALMGAKPV

Sequences:

>Translated_137_residues
METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMPFTGWWLVHLIGWPLGQFWIL
GSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIVSGVGFLAIAALMGAKPV
>Mature_137_residues
METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMPFTGWWLVHLIGWPLGQFWIL
GSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIVSGVGFLAIAALMGAKPV

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14907; Mature: 14907

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMP
CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHCC
FTGWWLVHLIGWPLGQFWILGSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIV
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SGVGFLAIAALMGAKPV
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METLTTLKVLHVAATVVILASGLGLAAVSWRNRSEGPASTMQRPWLFVWCLMLIGVLSMP
CCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHCC
FTGWWLVHLIGWPLGQFWILGSSVIYAVATFSAVWLLVRLNRLWTSGVGNRKFNLALAIV
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SGVGFLAIAALMGAKPV
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA