Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is sseA [H]

Identifier: 77461564

GI number: 77461564

Start: 6003185

End: 6004039

Strand: Reverse

Name: sseA [H]

Synonym: Pfl01_5343

Alternate gene names: 77461564

Gene position: 6004039-6003185 (Counterclockwise)

Preceding gene: 77461565

Following gene: 77461558

Centisome position: 93.25

GC content: 66.55

Gene sequence:

>855_bases
ATGCCGATTGCGCAACTGATCAGCCCGACCGCACTGGATGCCCGCAAGGCGCAACCGGGGCTGGTGATTCTCGATTGCCG
TTTTGCCCTCGAAGACCCGGATTACGGCCAGCGCAGCTACGCCGAGGGGCACATTGCCGGGGCACATTTCGCCGATCTTG
AACGCGACCTCAGCGGCCCGGTGACCAAGGGCGTGACCGGTCGCCATCCGCTGCCGGAGCCGGCGGCGCTGATCGAGCGC
CTGCAAGCATTCGGCATCAACAATGACAGTGACGTGGTTCTGTATGACGACGGCCCGGGCGCCTATGCGGCGCGGGCCTG
GTGGTTGCTGGCGTGGCTGGGCAAGCGCGACGGCGTGTTCATTCTCGATGGCGGGCTCAAGGCCTGGCATGCGGCGGGGC
TGCCGTTGAGTCTTGATCCACCGTCAGCGGCCCGGGGCAGCTTCAGCGGCCAGCCGGACATGAGCCTGCTGCTCAGCGCC
GAGCAATTGCAGCAGCGCCTCGGTCAGCCGGCCCTGACCCTGCTCGATGCCCGCGCCTTGCCGCGCTTCAAGGGCGAAGT
GGAGCCGATCGACCCGATCGCCGGGCACATTCCCGGCGCGCAATGCGCGGCGTTTACCGACAACCTGGGCAGCGACGGGC
GTTTCCTGCCGGCTGATCAGCTCAAACAGCGTTTCGCCGCGAAACTCGGCGAGCGTTCGCCGAGCGATCTGGTGGCTTAC
TGCGGCTCCGGGGTGACGGCGTGTCACAACCTGTTCGCCCTGTGCCTGGCGGGTTACCCGTTGGGTTCGCTGTATGCCGG
ATCGTGGAGCGAATGGATCAACGATCCTGCGCGCGGTATCGCTTCGGGCGAGTAA

Upstream 100 bases:

>100_bases
CGCGATGAGGTCAACGCCTTGTTCGAAGAGTTCTACGTGCCGCTGGCCCAGGCCCTCGAAGAAAGACCGTAATTCCATTT
CCTCACTGGAGTCGTTCGCT

Downstream 100 bases:

>100_bases
TCGCTCAGCGATCCAGCCGCGCGCTGCGATAGGCCGCCGGCCCCACGCCATAAACCTGTTTGAATTGCCGGCTCAGATGG
CTCTGGTCGGCAAATCCCAG

Product: 3-mercaptopyruvate sulfurtransferase

Products: NA

Alternate protein names: MST; Rhodanese-like protein [H]

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MPIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGPVTKGVTGRHPLPEPAALIER
LQAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVFILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSA
EQLQQRLGQPALTLLDARALPRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAY
CGSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE

Sequences:

>Translated_284_residues
MPIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGPVTKGVTGRHPLPEPAALIER
LQAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVFILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSA
EQLQQRLGQPALTLLDARALPRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAY
CGSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE
>Mature_283_residues
PIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGPVTKGVTGRHPLPEPAALIERL
QAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVFILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSAE
QLQQRLGQPALTLLDARALPRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAYC
GSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE

Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]

COG id: COG2897

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 rhodanese domains [H]

Homologues:

Organism=Homo sapiens, GI17402865, Length=266, Percent_Identity=34.9624060150376, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI194473668, Length=278, Percent_Identity=35.6115107913669, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI61835204, Length=278, Percent_Identity=35.6115107913669, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI194473681, Length=278, Percent_Identity=35.6115107913669, Blast_Score=126, Evalue=2e-29,
Organism=Escherichia coli, GI87082121, Length=261, Percent_Identity=32.9501915708812, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI87081967, Length=261, Percent_Identity=28.735632183908, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71997283, Length=210, Percent_Identity=31.4285714285714, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17561888, Length=286, Percent_Identity=26.5734265734266, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.2 [H]

Molecular weight: Translated: 30164; Mature: 30033

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGP
CCHHHHCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
VTKGVTGRHPLPEPAALIERLQAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVF
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEE
ILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSAEQLQQRLGQPALTLLDARAL
EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC
PRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAY
CCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
CGSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE
HCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHCCHHCCCCCCC
>Mature Secondary Structure 
PIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGP
CHHHHCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
VTKGVTGRHPLPEPAALIERLQAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVF
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEE
ILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSAEQLQQRLGQPALTLLDARAL
EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC
PRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAY
CCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
CGSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE
HCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]