| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is sseA [H]
Identifier: 77461564
GI number: 77461564
Start: 6003185
End: 6004039
Strand: Reverse
Name: sseA [H]
Synonym: Pfl01_5343
Alternate gene names: 77461564
Gene position: 6004039-6003185 (Counterclockwise)
Preceding gene: 77461565
Following gene: 77461558
Centisome position: 93.25
GC content: 66.55
Gene sequence:
>855_bases ATGCCGATTGCGCAACTGATCAGCCCGACCGCACTGGATGCCCGCAAGGCGCAACCGGGGCTGGTGATTCTCGATTGCCG TTTTGCCCTCGAAGACCCGGATTACGGCCAGCGCAGCTACGCCGAGGGGCACATTGCCGGGGCACATTTCGCCGATCTTG AACGCGACCTCAGCGGCCCGGTGACCAAGGGCGTGACCGGTCGCCATCCGCTGCCGGAGCCGGCGGCGCTGATCGAGCGC CTGCAAGCATTCGGCATCAACAATGACAGTGACGTGGTTCTGTATGACGACGGCCCGGGCGCCTATGCGGCGCGGGCCTG GTGGTTGCTGGCGTGGCTGGGCAAGCGCGACGGCGTGTTCATTCTCGATGGCGGGCTCAAGGCCTGGCATGCGGCGGGGC TGCCGTTGAGTCTTGATCCACCGTCAGCGGCCCGGGGCAGCTTCAGCGGCCAGCCGGACATGAGCCTGCTGCTCAGCGCC GAGCAATTGCAGCAGCGCCTCGGTCAGCCGGCCCTGACCCTGCTCGATGCCCGCGCCTTGCCGCGCTTCAAGGGCGAAGT GGAGCCGATCGACCCGATCGCCGGGCACATTCCCGGCGCGCAATGCGCGGCGTTTACCGACAACCTGGGCAGCGACGGGC GTTTCCTGCCGGCTGATCAGCTCAAACAGCGTTTCGCCGCGAAACTCGGCGAGCGTTCGCCGAGCGATCTGGTGGCTTAC TGCGGCTCCGGGGTGACGGCGTGTCACAACCTGTTCGCCCTGTGCCTGGCGGGTTACCCGTTGGGTTCGCTGTATGCCGG ATCGTGGAGCGAATGGATCAACGATCCTGCGCGCGGTATCGCTTCGGGCGAGTAA
Upstream 100 bases:
>100_bases CGCGATGAGGTCAACGCCTTGTTCGAAGAGTTCTACGTGCCGCTGGCCCAGGCCCTCGAAGAAAGACCGTAATTCCATTT CCTCACTGGAGTCGTTCGCT
Downstream 100 bases:
>100_bases TCGCTCAGCGATCCAGCCGCGCGCTGCGATAGGCCGCCGGCCCCACGCCATAAACCTGTTTGAATTGCCGGCTCAGATGG CTCTGGTCGGCAAATCCCAG
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGPVTKGVTGRHPLPEPAALIER LQAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVFILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSA EQLQQRLGQPALTLLDARALPRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAY CGSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE
Sequences:
>Translated_284_residues MPIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGPVTKGVTGRHPLPEPAALIER LQAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVFILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSA EQLQQRLGQPALTLLDARALPRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAY CGSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE >Mature_283_residues PIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGPVTKGVTGRHPLPEPAALIERL QAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVFILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSAE QLQQRLGQPALTLLDARALPRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAYC GSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=266, Percent_Identity=34.9624060150376, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI194473668, Length=278, Percent_Identity=35.6115107913669, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI61835204, Length=278, Percent_Identity=35.6115107913669, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI194473681, Length=278, Percent_Identity=35.6115107913669, Blast_Score=126, Evalue=2e-29, Organism=Escherichia coli, GI87082121, Length=261, Percent_Identity=32.9501915708812, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI87081967, Length=261, Percent_Identity=28.735632183908, Blast_Score=82, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71997283, Length=210, Percent_Identity=31.4285714285714, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17561888, Length=286, Percent_Identity=26.5734265734266, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30164; Mature: 30033
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGP CCHHHHCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC VTKGVTGRHPLPEPAALIERLQAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVF CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEE ILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSAEQLQQRLGQPALTLLDARAL EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC PRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAY CCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH CGSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE HCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHCCHHCCCCCCC >Mature Secondary Structure PIAQLISPTALDARKAQPGLVILDCRFALEDPDYGQRSYAEGHIAGAHFADLERDLSGP CHHHHCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC VTKGVTGRHPLPEPAALIERLQAFGINNDSDVVLYDDGPGAYAARAWWLLAWLGKRDGVF CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEE ILDGGLKAWHAAGLPLSLDPPSAARGSFSGQPDMSLLLSAEQLQQRLGQPALTLLDARAL EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC PRFKGEVEPIDPIAGHIPGAQCAAFTDNLGSDGRFLPADQLKQRFAAKLGERSPSDLVAY CCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH CGSGVTACHNLFALCLAGYPLGSLYAGSWSEWINDPARGIASGE HCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]