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The map label for this gene is uidR [C]

Identifier: 77461565

GI number: 77461565

Start: 6004068

End: 6004739

Strand: Reverse

Name: uidR [C]

Synonym: Pfl01_5344

Alternate gene names: 77461565

Gene position: 6004739-6004068 (Counterclockwise)

Preceding gene: 77461571

Following gene: 77461564

Centisome position: 93.26

GC content: 59.67

Gene sequence:

>672_bases
ATGGCCCCACGGATCAAAACCAGCGAGCGCATCGTGCAGAACAGCCTCGAGCTGTTCAATCAGCAGGGCGAGCGCAGCAT
CAGCACCAATCACATCGCCGCCCACATGGAGATTTCTCCGGGCAATCTGTACTACCACTTCCCCAACAAGCAGGCGATCA
TCGCCGTGCTGTTCAGTGAGTACGAAAGCCTGGTGGACAGCTTCCTGCGTCCGCCCCAGGGCCGTGCCGCGACGGTTGAA
GACAAGCGCTTCTATCTCAAGGAATTGCTGTCGGCGATGTGGCGCTACCGCTTTCTGCACCGCGATCTCGAACACTTGCT
CGACAGCGATCCGGATCTGGCCGCGCGTTATCGCCGCTTCTCCCAGCGCTGCGTAATCCAGGGCGCAGCGATCTACGAAG
GCTTTGTCGCTGCCGGGATCCTGAAGATGGACCGAGTGCAGATCGAATCCCTGACCCTCAACGCATGGATCATCCTCACC
TCGTGGGTGCGCTTCCTGTGCACGACCCGGGAGAACTCCAATTACCTCAGTGAACAGGCCATCAAGCGTGGCGTGTATCA
GGTGCTGGTGCTGGAAGCGGGGTTTGTCACCGAGCAGGCCCGCGATGAGGTCAACGCCTTGTTCGAAGAGTTCTACGTGC
CGCTGGCCCAGGCCCTCGAAGAAAGACCGTAA

Upstream 100 bases:

>100_bases
CTCTAGAAAGTCAAATGGCTTCCTTGCGCATCCTGGTTTTATCCCGTTCCGGTTAGGTCGTAAGATGCCCCCCAACGCAC
TCTGAATTAAAGCTCAAGCC

Downstream 100 bases:

>100_bases
TTCCATTTCCTCACTGGAGTCGTTCGCTATGCCGATTGCGCAACTGATCAGCCCGACCGCACTGGATGCCCGCAAGGCGC
AACCGGGGCTGGTGATTCTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MAPRIKTSERIVQNSLELFNQQGERSISTNHIAAHMEISPGNLYYHFPNKQAIIAVLFSEYESLVDSFLRPPQGRAATVE
DKRFYLKELLSAMWRYRFLHRDLEHLLDSDPDLAARYRRFSQRCVIQGAAIYEGFVAAGILKMDRVQIESLTLNAWIILT
SWVRFLCTTRENSNYLSEQAIKRGVYQVLVLEAGFVTEQARDEVNALFEEFYVPLAQALEERP

Sequences:

>Translated_223_residues
MAPRIKTSERIVQNSLELFNQQGERSISTNHIAAHMEISPGNLYYHFPNKQAIIAVLFSEYESLVDSFLRPPQGRAATVE
DKRFYLKELLSAMWRYRFLHRDLEHLLDSDPDLAARYRRFSQRCVIQGAAIYEGFVAAGILKMDRVQIESLTLNAWIILT
SWVRFLCTTRENSNYLSEQAIKRGVYQVLVLEAGFVTEQARDEVNALFEEFYVPLAQALEERP
>Mature_222_residues
APRIKTSERIVQNSLELFNQQGERSISTNHIAAHMEISPGNLYYHFPNKQAIIAVLFSEYESLVDSFLRPPQGRAATVED
KRFYLKELLSAMWRYRFLHRDLEHLLDSDPDLAARYRRFSQRCVIQGAAIYEGFVAAGILKMDRVQIESLTLNAWIILTS
WVRFLCTTRENSNYLSEQAIKRGVYQVLVLEAGFVTEQARDEVNALFEEFYVPLAQALEERP

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25838; Mature: 25707

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRIKTSERIVQNSLELFNQQGERSISTNHIAAHMEISPGNLYYHFPNKQAIIAVLFSE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHH
YESLVDSFLRPPQGRAATVEDKRFYLKELLSAMWRYRFLHRDLEHLLDSDPDLAARYRRF
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SQRCVIQGAAIYEGFVAAGILKMDRVQIESLTLNAWIILTSWVRFLCTTRENSNYLSEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IKRGVYQVLVLEAGFVTEQARDEVNALFEEFYVPLAQALEERP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APRIKTSERIVQNSLELFNQQGERSISTNHIAAHMEISPGNLYYHFPNKQAIIAVLFSE
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHH
YESLVDSFLRPPQGRAATVEDKRFYLKELLSAMWRYRFLHRDLEHLLDSDPDLAARYRRF
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SQRCVIQGAAIYEGFVAAGILKMDRVQIESLTLNAWIILTSWVRFLCTTRENSNYLSEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IKRGVYQVLVLEAGFVTEQARDEVNALFEEFYVPLAQALEERP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA