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The map label for this gene is ftsY [H]

Identifier: 77461558

GI number: 77461558

Start: 5995949

End: 5997496

Strand: Reverse

Name: ftsY [H]

Synonym: Pfl01_5337

Alternate gene names: 77461558

Gene position: 5997496-5995949 (Counterclockwise)

Preceding gene: 77461564

Following gene: 77461557

Centisome position: 93.15

GC content: 63.89

Gene sequence:

>1548_bases
ATGTTTGGTTCCAACGACGACAAGAAGACCCCAGCTGCGGCTGGCGAGAAGAAAAGCCTGTTCGGATGGCTGCGCAAGAA
ACCGCAGGAACCCGTCGTCGAACAGCCGACTGCCATTCCTGAGCCGGCCCCAGCGCCTGCTCCCGTATTAGAAGAAGCGC
CGGCACCGGTCGTGCTGCCGATCGCCGAGCCGGTGCTGCAACCGGTGGCCGAGGCCGATCCAGAAGCGCCGGCTGCCGCC
GAGTTGCCGCTGACCCCGGCCAGCGAACCGTGGCTGACATTGCCGGTGGCGGAAGAGCCGGTGGCGCTGGTCGAAGAGGC
CGCGCCGCACGTTACGCCGCCGATTCCTGCGCCGGTGGCGTTCACGCCAGAGCCTGTTCAGGCGCCGGTGGTGGAAGCTG
CTCCTTTCATTCCAGAACCTGTGGTTGCTGCTCCGGTTGCTCCGATTGTCGAAGTGCCCGAGCCTGCACCTGCACCTGCA
CCTGCACCTGCACCTGCACCTGCACCTGCACCTGCACCTGCACCTGCACCTGCACCTGCACCTGCACCTGTCGCCGTAGC
GCCAGTGGAATCCCAGGTTGAAACCCAGGTCGAGGCTCCGCGTACCGAGGAAACCAAGGCCGGCTTCTTCGCCCGTCTCA
AGCAGGGCCTGTCCAAGACCAGCGCCAGTATCGGCGAGGGCATGGCCAGCCTGTTCCTCGGCAAGAAAGCCATCGATGAC
GATCTGCTCGACGATCTCGAAACCCGCCTGCTGACGGCCGACGTTGGCGTCGAGGCGACTTCGGTGATCATCCAGCGCCT
GACCCAGAAGGTCGCACGTAAAGAGCTGGCCGATTCCGACGCCCTGTACAAATCCCTGCAGGCCGAGCTGGCCGCAATGC
TCAAACCGGTCGAGCAGCCGCTGAAGATCGCTTCCCGGAACAAGCCGTTCGTGATTCTGGTGGTCGGCGTCAACGGCGCC
GGCAAGACCACCACCATCGGCAAACTGGCGAAGAAACTGCAGCTGGAAGGCAAGAAAGTCATGCTGGCCGCCGGTGATAC
CTTCCGTGCTGCGGCTGTCGAGCAGTTGCAGGTCTGGGGCGAGCGCAACAAGATTCCGGTAATCGCCCAGCACACGGGCG
CGGACTCGGCTTCGGTGATCTTCGACGCCGTGCAGGCCGCCAAGGCTCGTGGCATCGACGTGCTGATCGCCGACACCGCC
GGTCGTCTGCACACCAAAGACAACCTGATGGAAGAACTGAAAAAGGTTCGCCGGGTGATCGGCAAGCTCGACGCCGATGC
GCCGCACGAAGTGCTGCTGGTGCTCGACGCCGGCACCGGCCAGAACGCCATCAACCAGGCCAAGCAATTCAACCAGACCG
TCGAACTGACCGGCCTGGCGCTGACCAAGCTCGACGGCACCGCCAAGGGCGGGGTGATTTTCGCCCTGGCCAAGCAGTTC
GGCCTGCCGATCCGCTATATCGGCGTCGGTGAAGGCATCGACGATCTGCGTACCTTTGAAGCCGAACCCTTTGTCCAGGC
ACTGTTTGCCGAGCGGGAGCGTTCATGA

Upstream 100 bases:

>100_bases
CGCGTGAACAAGCTGGGTGAAACACAGTCTGTTCTGCATCGAATATTTATTTGCCGGGGCGCCCCTGTGGCGCGTCGCTA
CCGTGAGATAGCCGTCCTCC

Downstream 100 bases:

>100_bases
TTCGTTTCGAACAGGTCGGTAAGCGCTACCCGAACGGTCACGTCGGCTTGCATGAGCTGAGCTTTCGAGTCCGTCGCGGC
GAGTTCCTGTTTGTCACCGG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MFGSNDDKKTPAAAGEKKSLFGWLRKKPQEPVVEQPTAIPEPAPAPAPVLEEAPAPVVLPIAEPVLQPVAEADPEAPAAA
ELPLTPASEPWLTLPVAEEPVALVEEAAPHVTPPIPAPVAFTPEPVQAPVVEAAPFIPEPVVAAPVAPIVEVPEPAPAPA
PAPAPAPAPAPAPAPAPAPAPAPVAVAPVESQVETQVEAPRTEETKAGFFARLKQGLSKTSASIGEGMASLFLGKKAIDD
DLLDDLETRLLTADVGVEATSVIIQRLTQKVARKELADSDALYKSLQAELAAMLKPVEQPLKIASRNKPFVILVVGVNGA
GKTTTIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNKIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTA
GRLHTKDNLMEELKKVRRVIGKLDADAPHEVLLVLDAGTGQNAINQAKQFNQTVELTGLALTKLDGTAKGGVIFALAKQF
GLPIRYIGVGEGIDDLRTFEAEPFVQALFAERERS

Sequences:

>Translated_515_residues
MFGSNDDKKTPAAAGEKKSLFGWLRKKPQEPVVEQPTAIPEPAPAPAPVLEEAPAPVVLPIAEPVLQPVAEADPEAPAAA
ELPLTPASEPWLTLPVAEEPVALVEEAAPHVTPPIPAPVAFTPEPVQAPVVEAAPFIPEPVVAAPVAPIVEVPEPAPAPA
PAPAPAPAPAPAPAPAPAPAPAPVAVAPVESQVETQVEAPRTEETKAGFFARLKQGLSKTSASIGEGMASLFLGKKAIDD
DLLDDLETRLLTADVGVEATSVIIQRLTQKVARKELADSDALYKSLQAELAAMLKPVEQPLKIASRNKPFVILVVGVNGA
GKTTTIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNKIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTA
GRLHTKDNLMEELKKVRRVIGKLDADAPHEVLLVLDAGTGQNAINQAKQFNQTVELTGLALTKLDGTAKGGVIFALAKQF
GLPIRYIGVGEGIDDLRTFEAEPFVQALFAERERS
>Mature_515_residues
MFGSNDDKKTPAAAGEKKSLFGWLRKKPQEPVVEQPTAIPEPAPAPAPVLEEAPAPVVLPIAEPVLQPVAEADPEAPAAA
ELPLTPASEPWLTLPVAEEPVALVEEAAPHVTPPIPAPVAFTPEPVQAPVVEAAPFIPEPVVAAPVAPIVEVPEPAPAPA
PAPAPAPAPAPAPAPAPAPAPAPVAVAPVESQVETQVEAPRTEETKAGFFARLKQGLSKTSASIGEGMASLFLGKKAIDD
DLLDDLETRLLTADVGVEATSVIIQRLTQKVARKELADSDALYKSLQAELAAMLKPVEQPLKIASRNKPFVILVVGVNGA
GKTTTIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWGERNKIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTA
GRLHTKDNLMEELKKVRRVIGKLDADAPHEVLLVLDAGTGQNAINQAKQFNQTVELTGLALTKLDGTAKGGVIFALAKQF
GLPIRYIGVGEGIDDLRTFEAEPFVQALFAERERS

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=272, Percent_Identity=33.4558823529412, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI226371618, Length=206, Percent_Identity=36.8932038834951, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI295424842, Length=338, Percent_Identity=28.9940828402367, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI23308697, Length=338, Percent_Identity=28.9940828402367, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI89061728, Length=144, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=2e-16,
Organism=Escherichia coli, GI1789874, Length=306, Percent_Identity=67.6470588235294, Blast_Score=409, Evalue=1e-115,
Organism=Escherichia coli, GI1788963, Length=305, Percent_Identity=36.3934426229508, Blast_Score=151, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=275, Percent_Identity=30.5454545454545, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=220, Percent_Identity=33.6363636363636, Blast_Score=108, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=281, Percent_Identity=31.6725978647687, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=327, Percent_Identity=29.0519877675841, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI17647949, Length=278, Percent_Identity=32.7338129496403, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24641198, Length=301, Percent_Identity=26.9102990033223, Blast_Score=105, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 53903; Mature: 53903

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGSNDDKKTPAAAGEKKSLFGWLRKKPQEPVVEQPTAIPEPAPAPAPVLEEAPAPVVLP
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEC
IAEPVLQPVAEADPEAPAAAELPLTPASEPWLTLPVAEEPVALVEEAAPHVTPPIPAPVA
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCC
FTPEPVQAPVVEAAPFIPEPVVAAPVAPIVEVPEPAPAPAPAPAPAPAPAPAPAPAPAPA
CCCCCCCCCHHHCCCCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPVAVAPVESQVETQVEAPRTEETKAGFFARLKQGLSKTSASIGEGMASLFLGKKAIDD
CCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCH
DLLDDLETRLLTADVGVEATSVIIQRLTQKVARKELADSDALYKSLQAELAAMLKPVEQP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LKIASRNKPFVILVVGVNGAGKTTTIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWG
HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC
ERNKIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELKKVRRVI
CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
GKLDADAPHEVLLVLDAGTGQNAINQAKQFNQTVELTGLALTKLDGTAKGGVIFALAKQF
HHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCEEEHHHH
GLPIRYIGVGEGIDDLRTFEAEPFVQALFAERERS
CCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MFGSNDDKKTPAAAGEKKSLFGWLRKKPQEPVVEQPTAIPEPAPAPAPVLEEAPAPVVLP
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEC
IAEPVLQPVAEADPEAPAAAELPLTPASEPWLTLPVAEEPVALVEEAAPHVTPPIPAPVA
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCC
FTPEPVQAPVVEAAPFIPEPVVAAPVAPIVEVPEPAPAPAPAPAPAPAPAPAPAPAPAPA
CCCCCCCCCHHHCCCCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPVAVAPVESQVETQVEAPRTEETKAGFFARLKQGLSKTSASIGEGMASLFLGKKAIDD
CCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCH
DLLDDLETRLLTADVGVEATSVIIQRLTQKVARKELADSDALYKSLQAELAAMLKPVEQP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LKIASRNKPFVILVVGVNGAGKTTTIGKLAKKLQLEGKKVMLAAGDTFRAAAVEQLQVWG
HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC
ERNKIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELKKVRRVI
CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
GKLDADAPHEVLLVLDAGTGQNAINQAKQFNQTVELTGLALTKLDGTAKGGVIFALAKQF
HHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCEEEHHHH
GLPIRYIGVGEGIDDLRTFEAEPFVQALFAERERS
CCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]