Click here to switch to the map view.

The map label for this gene is 77461537

Identifier: 77461537

GI number: 77461537

Start: 5980821

End: 5981255

Strand: Reverse

Name: 77461537

Synonym: Pfl01_5316

Alternate gene names: NA

Gene position: 5981255-5980821 (Counterclockwise)

Preceding gene: 77461539

Following gene: 77461529

Centisome position: 92.9

GC content: 58.16

Gene sequence:

>435_bases
ATGAACGGCTATCAGCTGCCCCGTGTGAAGGAAAAAGACACCCATAGCAAGGTGATCGGTTACCTGTTGTGGATTTTCGG
TTTCACAGGCTCACACCGCTTCTATTACGGCAAGCCGGTGACCGGCACGATCTGGTTTTTCACTTTCGGGTTGCTGGGGA
TCGGCTGGCTGATCGACGTGTTCCTGATCCCGGCGATGGATCGCGAAGCCGACCTGCGTTTCGCCGCGGGCCCGATCGAG
TACAACGTGGCATGGATTCTGCTGACCTTCCTCGGCGCGCTCGGCGTGCACCGGATGTATCAGGGCAAGTGGATCAGCGG
GGTGGTGTACCTGCTGACCGGCGGGTTGTTCTTTCTTGGGGTGCTGTATGACTTCTGGACGCTGAACGATCAGGTGTCGG
TGCGTAATGCCGAAGGGCGGGGCGCATTTCAGTAA

Upstream 100 bases:

>100_bases
TTTGACGGGACACACGGTAGCATTTGCCATACGTCGGCTACCTGTAAAAAAGTCACAAAGAATTAAAGAATATTTATCTA
TCGCGTGTATCGAGGTCTTA

Downstream 100 bases:

>100_bases
GTGATGGCGAGGGAGCTGGCTCCCTCGCCATTTTTTTTACGCCTGATGGCTGATCCGGCCATCCACCAGCGTGTAACGCA
CAACACCCGGCAGGCTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: TM2 Domain Containing Protein; TM2 Domain Containing Protein+B; TM2 Domain Family Protein; TM2 Domain Family

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNGYQLPRVKEKDTHSKVIGYLLWIFGFTGSHRFYYGKPVTGTIWFFTFGLLGIGWLIDVFLIPAMDREADLRFAAGPIE
YNVAWILLTFLGALGVHRMYQGKWISGVVYLLTGGLFFLGVLYDFWTLNDQVSVRNAEGRGAFQ

Sequences:

>Translated_144_residues
MNGYQLPRVKEKDTHSKVIGYLLWIFGFTGSHRFYYGKPVTGTIWFFTFGLLGIGWLIDVFLIPAMDREADLRFAAGPIE
YNVAWILLTFLGALGVHRMYQGKWISGVVYLLTGGLFFLGVLYDFWTLNDQVSVRNAEGRGAFQ
>Mature_144_residues
MNGYQLPRVKEKDTHSKVIGYLLWIFGFTGSHRFYYGKPVTGTIWFFTFGLLGIGWLIDVFLIPAMDREADLRFAAGPIE
YNVAWILLTFLGALGVHRMYQGKWISGVVYLLTGGLFFLGVLYDFWTLNDQVSVRNAEGRGAFQ

Specific function: Unknown

COG id: COG2314

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16413; Mature: 16413

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGYQLPRVKEKDTHSKVIGYLLWIFGFTGSHRFYYGKPVTGTIWFFTFGLLGIGWLIDV
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
FLIPAMDREADLRFAAGPIEYNVAWILLTFLGALGVHRMYQGKWISGVVYLLTGGLFFLG
HHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLYDFWTLNDQVSVRNAEGRGAFQ
HHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MNGYQLPRVKEKDTHSKVIGYLLWIFGFTGSHRFYYGKPVTGTIWFFTFGLLGIGWLIDV
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
FLIPAMDREADLRFAAGPIEYNVAWILLTFLGALGVHRMYQGKWISGVVYLLTGGLFFLG
HHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLYDFWTLNDQVSVRNAEGRGAFQ
HHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA