| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is estA [H]
Identifier: 77461338
GI number: 77461338
Start: 5748373
End: 5750283
Strand: Direct
Name: estA [H]
Synonym: Pfl01_5117
Alternate gene names: 77461338
Gene position: 5748373-5750283 (Clockwise)
Preceding gene: 77461332
Following gene: 77461349
Centisome position: 89.28
GC content: 62.95
Gene sequence:
>1911_bases ATGATCAAACAGACGTTGTTTGTACCGCTCGCCGGATGCCTGCTCGCGATGGCCTGCGCCCAGGCGAACGCCGCACCCAA TCCTTATTCGAATTTCGTGGTCTTCGGCGACAGCCTGAGCGATGCGGGGACTTTCACCGACAGCGGCGGCCCGGCCGGCG CCACACAGCGCTACACCAACCGCACCGGTCCGGTGTATTTGGACGGCAGCGGTGAACTCCGCTCGCTGAACTCGACGCAA CTGCTCGGTGGCCGACTCGGCTTCACACCGGATCAAACCGCCTCCTCGTCCTCAGCAGTACGTGCCGGCCAAGGCCAGCC GGATGGTAACAACTGGGCTGTCGGCGGCTACCGCACCGACCAGATTCTCGACTCGATCACCAGCCAGTCCGCCACCGGCG AACGCACCCGCGCCGGTTATCTGCCGTCGAACGGTTTCCGTGCTGACCCGAATGCCTTGTATTACCTGACCGGGGGCGGC AACGACTTCCTTCAGGGCCGCGTCACCAGCCTGCCTCAGGCGAATGCCGCCGCCGATCGACTGGTCGACAGCGTACGCAC ACTGCAAGGTGCCGGCGCCCGCTACATCATGGTCTGGCTGTTGCCGGACATCGGCCTGACCCCGGCCATCAACGGCTCGC CGCTGCAGGCCTTCACCTCGCAACTCAGCACCCAGTTCAACACCGAACTGGTCAGCCAGTTGCAGAGCGTCAACGCCAAC GTGATTCCGCTGAACGTCCCGGTTCTGCTCAAAGAGGCGTTCGCCAATCCGGCGCAATTCGGTCTGGCGACCGACCAGAA TCTGGTCGGCACCTGCTTCAGCGGCAGCGGCTGCACCGAGAACGCCCGGTATGGCATCAACAGCGCCACCCCGGATCCGA CCAAGCTGATCTACAACGACGCCGTCCACCCGACCGAAGCCGGGCAGCGCCTGATTGCCGATTACGCTTACTCGCTGCTG GCCGCGCCATGGGAAGCGACTCTGCTTCCGCAAATGGCCCAGGGCACCTTGCGCTCGCATCAGGATGAACTGCGCAACCA GTGGCTGGCGGATTGGGAAAACTGGCAGGCCGTTGGCCAATGGCGGGCGATTGTTGCCGGTGGTGGCCAGCATCAGGACT TCGACAGCCAGCGCAGCGGCGCCAGCGCCGACGGTAACGGTTACAACCTGAACATCGGCGGCAGCTACCGTCTCAACGAC GCCTGGCGCGTGGGCGTGGCGGCCGGTTTCTACAATCAGAAGCTCGAGGCCGGCGACAACGACTCGGACTACAAACTGAA CACTTATCTGGGCACCGCGTTCGCCCAGTACCAGCAGAACCGCTGGTGGGGTGACGCCGCCGTGACCGCCGGACATCTGG ATTACGACAGCCTCAAACGCAAATTCCAGCTGGGGGTAAACGAACGCGGCGAGAAAGGCGATACCGACGGCTATGTTCTG GCCTTCAGTGGACGCGTGGGTTACGACATTGCGCCAGAGGCAAGCAGCCCATGGCACCTGTCGCCGTTCGTCAGCGCCGA TTTCGCCAAGGTTGAAGTCGATGGTTACTCGGAAAACGGCGCCGACTCCACCGCGCTGACGTTCGATGACCAGTCGCGCA TCTCCCGGCGCCTGGGCCTCGGGATCCAGGGCAAGTACCAGATCACCTCGCAGACCCAGGTGTTCGGCGAACTGGCCCAC GAACGTGAGTACAACGACGACACCCAGAATGTGACGATGAACCTCAACAGCCTGCCGAACAACCGCTACACCCTGGCCGG CTATACCCCTCAGACCAACCTGAACCGCCTGAACCTGGGCGTGAGCCACAACCTCACCAAGGATCTGGCATTACGTGCCA GCTACGACATCCGCAAGGATGACGACTTCACCCAGCAAGGGATCAACGTCGGCGTAGCGCTCGACTTCTGA
Upstream 100 bases:
>100_bases GGGATAAAACAATGGGAGGCTTGACGACCGATGGCAAAACGCCGGAAGTTTTTGGTACTGTCGTTTCGTTCACTACAACA ATAAATAAACGGACTTGCTC
Downstream 100 bases:
>100_bases TTCGCAGGCAAAAAAAATGCGGCGCCTTCACAGGCGCCGCATTTTTTTAGGCTGAATCATCAATGACTCAGTCCGGGGTT TGCTCGGCCAGCGCAACAGC
Product: outer membrane autotransporter barrel protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MIKQTLFVPLAGCLLAMACAQANAAPNPYSNFVVFGDSLSDAGTFTDSGGPAGATQRYTNRTGPVYLDGSGELRSLNSTQ LLGGRLGFTPDQTASSSSAVRAGQGQPDGNNWAVGGYRTDQILDSITSQSATGERTRAGYLPSNGFRADPNALYYLTGGG NDFLQGRVTSLPQANAAADRLVDSVRTLQGAGARYIMVWLLPDIGLTPAINGSPLQAFTSQLSTQFNTELVSQLQSVNAN VIPLNVPVLLKEAFANPAQFGLATDQNLVGTCFSGSGCTENARYGINSATPDPTKLIYNDAVHPTEAGQRLIADYAYSLL AAPWEATLLPQMAQGTLRSHQDELRNQWLADWENWQAVGQWRAIVAGGGQHQDFDSQRSGASADGNGYNLNIGGSYRLND AWRVGVAAGFYNQKLEAGDNDSDYKLNTYLGTAFAQYQQNRWWGDAAVTAGHLDYDSLKRKFQLGVNERGEKGDTDGYVL AFSGRVGYDIAPEASSPWHLSPFVSADFAKVEVDGYSENGADSTALTFDDQSRISRRLGLGIQGKYQITSQTQVFGELAH EREYNDDTQNVTMNLNSLPNNRYTLAGYTPQTNLNRLNLGVSHNLTKDLALRASYDIRKDDDFTQQGINVGVALDF
Sequences:
>Translated_636_residues MIKQTLFVPLAGCLLAMACAQANAAPNPYSNFVVFGDSLSDAGTFTDSGGPAGATQRYTNRTGPVYLDGSGELRSLNSTQ LLGGRLGFTPDQTASSSSAVRAGQGQPDGNNWAVGGYRTDQILDSITSQSATGERTRAGYLPSNGFRADPNALYYLTGGG NDFLQGRVTSLPQANAAADRLVDSVRTLQGAGARYIMVWLLPDIGLTPAINGSPLQAFTSQLSTQFNTELVSQLQSVNAN VIPLNVPVLLKEAFANPAQFGLATDQNLVGTCFSGSGCTENARYGINSATPDPTKLIYNDAVHPTEAGQRLIADYAYSLL AAPWEATLLPQMAQGTLRSHQDELRNQWLADWENWQAVGQWRAIVAGGGQHQDFDSQRSGASADGNGYNLNIGGSYRLND AWRVGVAAGFYNQKLEAGDNDSDYKLNTYLGTAFAQYQQNRWWGDAAVTAGHLDYDSLKRKFQLGVNERGEKGDTDGYVL AFSGRVGYDIAPEASSPWHLSPFVSADFAKVEVDGYSENGADSTALTFDDQSRISRRLGLGIQGKYQITSQTQVFGELAH EREYNDDTQNVTMNLNSLPNNRYTLAGYTPQTNLNRLNLGVSHNLTKDLALRASYDIRKDDDFTQQGINVGVALDF >Mature_636_residues MIKQTLFVPLAGCLLAMACAQANAAPNPYSNFVVFGDSLSDAGTFTDSGGPAGATQRYTNRTGPVYLDGSGELRSLNSTQ LLGGRLGFTPDQTASSSSAVRAGQGQPDGNNWAVGGYRTDQILDSITSQSATGERTRAGYLPSNGFRADPNALYYLTGGG NDFLQGRVTSLPQANAAADRLVDSVRTLQGAGARYIMVWLLPDIGLTPAINGSPLQAFTSQLSTQFNTELVSQLQSVNAN VIPLNVPVLLKEAFANPAQFGLATDQNLVGTCFSGSGCTENARYGINSATPDPTKLIYNDAVHPTEAGQRLIADYAYSLL AAPWEATLLPQMAQGTLRSHQDELRNQWLADWENWQAVGQWRAIVAGGGQHQDFDSQRSGASADGNGYNLNIGGSYRLND AWRVGVAAGFYNQKLEAGDNDSDYKLNTYLGTAFAQYQQNRWWGDAAVTAGHLDYDSLKRKFQLGVNERGEKGDTDGYVL AFSGRVGYDIAPEASSPWHLSPFVSADFAKVEVDGYSENGADSTALTFDDQSRISRRLGLGIQGKYQITSQTQVFGELAH EREYNDDTQNVTMNLNSLPNNRYTLAGYTPQTNLNRLNLGVSHNLTKDLALRASYDIRKDDDFTQQGINVGVALDF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 68639; Mature: 68639
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQTLFVPLAGCLLAMACAQANAAPNPYSNFVVFGDSLSDAGTFTDSGGPAGATQRYTN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCC RTGPVYLDGSGELRSLNSTQLLGGRLGFTPDQTASSSSAVRAGQGQPDGNNWAVGGYRTD CCCCEEECCCCCEECCCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCEEHH QILDSITSQSATGERTRAGYLPSNGFRADPNALYYLTGGGNDFLQGRVTSLPQANAAADR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCHHHCCCCCHHHHHH LVDSVRTLQGAGARYIMVWLLPDIGLTPAINGSPLQAFTSQLSTQFNTELVSQLQSVNAN HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC VIPLNVPVLLKEAFANPAQFGLATDQNLVGTCFSGSGCTENARYGINSATPDPTKLIYND EEEECCHHHHHHHHCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECC AVHPTEAGQRLIADYAYSLLAAPWEATLLPQMAQGTLRSHQDELRNQWLADWENWQAVGQ CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC WRAIVAGGGQHQDFDSQRSGASADGNGYNLNIGGSYRLNDAWRVGVAAGFYNQKLEAGDN EEEEEECCCCCCCCCHHCCCCCCCCCCEEEECCCCEEECCCEEEEEEECCCCCCCCCCCC DSDYKLNTYLGTAFAQYQQNRWWGDAAVTAGHLDYDSLKRKFQLGVNERGEKGDTDGYVL CCCEEEEHHHHHHHHHHHHCCEECCHHEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEE AFSGRVGYDIAPEASSPWHLSPFVSADFAKVEVDGYSENGADSTALTFDDQSRISRRLGL EECCCCCCEECCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHCC GIQGKYQITSQTQVFGELAHEREYNDDTQNVTMNLNSLPNNRYTLAGYTPQTNLNRLNLG CCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEC VSHNLTKDLALRASYDIRKDDDFTQQGINVGVALDF CCCCCCHHHEEEECCCCCCCCCHHHCCCEEEEEECC >Mature Secondary Structure MIKQTLFVPLAGCLLAMACAQANAAPNPYSNFVVFGDSLSDAGTFTDSGGPAGATQRYTN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCC RTGPVYLDGSGELRSLNSTQLLGGRLGFTPDQTASSSSAVRAGQGQPDGNNWAVGGYRTD CCCCEEECCCCCEECCCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCEEHH QILDSITSQSATGERTRAGYLPSNGFRADPNALYYLTGGGNDFLQGRVTSLPQANAAADR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCHHHCCCCCHHHHHH LVDSVRTLQGAGARYIMVWLLPDIGLTPAINGSPLQAFTSQLSTQFNTELVSQLQSVNAN HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC VIPLNVPVLLKEAFANPAQFGLATDQNLVGTCFSGSGCTENARYGINSATPDPTKLIYND EEEECCHHHHHHHHCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECC AVHPTEAGQRLIADYAYSLLAAPWEATLLPQMAQGTLRSHQDELRNQWLADWENWQAVGQ CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC WRAIVAGGGQHQDFDSQRSGASADGNGYNLNIGGSYRLNDAWRVGVAAGFYNQKLEAGDN EEEEEECCCCCCCCCHHCCCCCCCCCCEEEECCCCEEECCCEEEEEEECCCCCCCCCCCC DSDYKLNTYLGTAFAQYQQNRWWGDAAVTAGHLDYDSLKRKFQLGVNERGEKGDTDGYVL CCCEEEEHHHHHHHHHHHHCCEECCHHEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEE AFSGRVGYDIAPEASSPWHLSPFVSADFAKVEVDGYSENGADSTALTFDDQSRISRRLGL EECCCCCCEECCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHCC GIQGKYQITSQTQVFGELAHEREYNDDTQNVTMNLNSLPNNRYTLAGYTPQTNLNRLNLG CCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEEEEC VSHNLTKDLALRASYDIRKDDDFTQQGINVGVALDF CCCCCCHHHEEEECCCCCCCCCHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10559163; 10984043 [H]