| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is bfr [H]
Identifier: 77461273
GI number: 77461273
Start: 5689628
End: 5690095
Strand: Reverse
Name: bfr [H]
Synonym: Pfl01_5052
Alternate gene names: 77461273
Gene position: 5690095-5689628 (Counterclockwise)
Preceding gene: 77461274
Following gene: 77461271
Centisome position: 88.38
GC content: 54.27
Gene sequence:
>468_bases ATGCAAGGCCACCCAGACGTTATCGATTACCTCAACACGTTGCTGACCGGCGAACTGGCCGCGCGTGACCAATATTTCGT TCACTCGCGGATGTATGAGGACTGGGGATTCACCAAGCTCTACGAACGAATCAACCACGAGATGGAAGAAGAGGCCGCTC ATGCCGATGCGCTGATGCGCCGGATTCTGATGCTCGAAGGCACTCCGCGCATGCGCCCGGATGACCTGGATGTTGGTACC ACGGTCGAGACCATGCTCGAAGCGGATCTGCGTCTTGAGTACAAGGTTCGTGCTGCACTGTGCAAGGGCATCGAGCTGTG TGAAAAGAATGGCGACTATGTAAGCCGCGATATCCTCAAGCTTCAGTTGCATGATACCGAAGAAGATCACACCTACTGGC TTGAGAAGCAGTTGGGACTGATCAAACTGATCGGTATCCAGAACTACCTGCAGTCTCACGCGTCCTGA
Upstream 100 bases:
>100_bases TGCTTTTCTCAGAATATCTTCGCTTTTATTGCGCGAAGTGAGTGACCTTCCAGTCAGGTTGGTTCAAACTACAGACTTTC AAGCAGGGAGATGTAGGGCG
Downstream 100 bases:
>100_bases TTGCAGTCGATACAAAAAAGCCCCTGTCACTGACGAAGTGACAGGGGCTTTTTCATGTCCGGCAATCAGGCCCGATCGCG GATCAGCAGCGGCTTGAGGT
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MQGHPDVIDYLNTLLTGELAARDQYFVHSRMYEDWGFTKLYERINHEMEEEAAHADALMRRILMLEGTPRMRPDDLDVGT TVETMLEADLRLEYKVRAALCKGIELCEKNGDYVSRDILKLQLHDTEEDHTYWLEKQLGLIKLIGIQNYLQSHAS
Sequences:
>Translated_155_residues MQGHPDVIDYLNTLLTGELAARDQYFVHSRMYEDWGFTKLYERINHEMEEEAAHADALMRRILMLEGTPRMRPDDLDVGT TVETMLEADLRLEYKVRAALCKGIELCEKNGDYVSRDILKLQLHDTEEDHTYWLEKQLGLIKLIGIQNYLQSHAS >Mature_155_residues MQGHPDVIDYLNTLLTGELAARDQYFVHSRMYEDWGFTKLYERINHEMEEEAAHADALMRRILMLEGTPRMRPDDLDVGT TVETMLEADLRLEYKVRAALCKGIELCEKNGDYVSRDILKLQLHDTEEDHTYWLEKQLGLIKLIGIQNYLQSHAS
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=154, Percent_Identity=44.8051948051948, Blast_Score=120, Evalue=5e-29,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18085; Mature: 18085
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGHPDVIDYLNTLLTGELAARDQYFVHSRMYEDWGFTKLYERINHEMEEEAAHADALMR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RILMLEGTPRMRPDDLDVGTTVETMLEADLRLEYKVRAALCKGIELCEKNGDYVSRDILK HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEE LQLHDTEEDHTYWLEKQLGLIKLIGIQNYLQSHAS EEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MQGHPDVIDYLNTLLTGELAARDQYFVHSRMYEDWGFTKLYERINHEMEEEAAHADALMR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RILMLEGTPRMRPDDLDVGTTVETMLEADLRLEYKVRAALCKGIELCEKNGDYVSRDILK HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEE LQLHDTEEDHTYWLEKQLGLIKLIGIQNYLQSHAS EEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9358059 [H]