Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is cat [H]

Identifier: 77461274

GI number: 77461274

Start: 5690245

End: 5691699

Strand: Reverse

Name: cat [H]

Synonym: Pfl01_5053

Alternate gene names: 77461274

Gene position: 5691699-5690245 (Counterclockwise)

Preceding gene: 77461275

Following gene: 77461273

Centisome position: 88.4

GC content: 58.69

Gene sequence:

>1455_bases
ATGAGCCAGAACAAGACGCTTACGACCGCCAGTGGCGCACCTGTCGCCGATAACCAGAACTCTCGCTCCTCCGGCCCTCG
TGGTCCGTTGTTGCTCGATGATTTCCACCTGATCGAGAAGCTTGCTCACTTCAACCGGGAAAACATTCCTGAACGTCGTG
TACACGCCAAGGGTTCGGGCGCATACGGCACTTTCACGGTCACTCGCGACATTACGCAGTACACCAGCGCCAAGCTGTTC
TCTGCTGTCGGCAAGCAGACGCCGACCTTCCTGCGTTTCTCCACGGTCGGTGGTGAGCGTGGTTCGGCCGATACCGAGCG
CGATCCGCGTGGCTTCGCCCTCAAGTTCTACACCGAAGAAGGCAACTGGGACATCGTCGGCAACAACACGCCGGTGTTCT
TCATTCGCGATCCGCTGAAATTTCCTGACTTTATCCACACCCAGAAACGCCTGCCGCAAAGCAACCTGAAAAGCGCGCAG
ATGATGTGGGACTTCTGGTCGCATTCGCCTGAAGCGCTGCACCAGGTCACGATCCTGTTCTCCGATCGCGGTATACCGGA
CGGCTATCGCCACATGCACGGCTTCGGCAGTCACACCTACAGCCTCATCAGCGCTCAAGGCGAGCGCCACTGGGTGAAGT
GGCACTACAAGACCAAGCAAGGGATCAAGAACCTCGCGCCGGCAGACGCGGCACGTCTGGCAGGCACAGACCCGGACTAC
GCCCAGCGCGATCTGTTCGAAGCCATCGAGCGTGGTGACTTCCCGAAATGGAGCGTATGCATCCAGATCATGACCGAAGC
CCAAGCCGCTGCGCACTATGAGAACCCGTTCGACGTGACCAAGACCTGGTCGCAAAAGGAGTTTCCACTGATCGAGGTGG
GTGAGTTGGAGCTGAACCGTAATCCGCTCAACTACTTTGCCGAAGTTGAGCAAGCTGCGTTCGGCCCGAGCAACATGGTG
CCTGGCGTAGGTCTGTCGCCAGATCGCATGCTGCAAGGTCGAGTATTCGCGTACGCCGATGCCCACCGCTACCGCGTAGG
CACCAACCACCAGCAGCTGCCAGTTAACGCCCCGCGCAGCCCGGTGAATACTTACCAGCGCGACGGTTCTATGGCTTTTG
GCAGCAATGGTGGCGCGGCGCCTAACTACGAGCCAAACAGCTACGTAGAGTCGCCGAAACAAGCGCCACATTATGCCGAG
CCTGCGCTGGCCCTGAGTGGTGCGGCTGATCGCTACGATCACCGCGAAGACAGCGACTACTACAGCCACGCCGGTGCGCT
GTTCCGTTTGATGAGCGACGAACAGAAAGCGTTGCTGGTCAGCAACATCGCCGGTGCGATGGGGGGTGTTTCGAGTGATG
TGATCGACCGTCAGCTGCAGCATTTCTACAAGGCCGATCCGGCGTACGGAGAAGCAATCGCAAAGCTGCTCAACGTACAG
CTTAACGAAGTCTAA

Upstream 100 bases:

>100_bases
GACCATAAGTTAATGAATTTGTGGCTGTCATATTGATGATCGATACTCCCCAACAAGCCGATTAGCCGGCAGTTCAAGAC
CGATAGAGGAAGAAGTTCGC

Downstream 100 bases:

>100_bases
ACGAGAAGCAGAACCGCCCTCATTCGGGCGGTTTTTGCGTTATTTAGGCTGCTTTTCTCAGAATATCTTCGCTTTTATTG
CGCGAAGTGAGTGACCTTCC

Product: catalase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSQNKTLTTASGAPVADNQNSRSSGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITQYTSAKLF
SAVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQ
MMWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLISAQGERHWVKWHYKTKQGIKNLAPADAARLAGTDPDY
AQRDLFEAIERGDFPKWSVCIQIMTEAQAAAHYENPFDVTKTWSQKEFPLIEVGELELNRNPLNYFAEVEQAAFGPSNMV
PGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRSPVNTYQRDGSMAFGSNGGAAPNYEPNSYVESPKQAPHYAE
PALALSGAADRYDHREDSDYYSHAGALFRLMSDEQKALLVSNIAGAMGGVSSDVIDRQLQHFYKADPAYGEAIAKLLNVQ
LNEV

Sequences:

>Translated_484_residues
MSQNKTLTTASGAPVADNQNSRSSGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITQYTSAKLF
SAVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQ
MMWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLISAQGERHWVKWHYKTKQGIKNLAPADAARLAGTDPDY
AQRDLFEAIERGDFPKWSVCIQIMTEAQAAAHYENPFDVTKTWSQKEFPLIEVGELELNRNPLNYFAEVEQAAFGPSNMV
PGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRSPVNTYQRDGSMAFGSNGGAAPNYEPNSYVESPKQAPHYAE
PALALSGAADRYDHREDSDYYSHAGALFRLMSDEQKALLVSNIAGAMGGVSSDVIDRQLQHFYKADPAYGEAIAKLLNVQ
LNEV
>Mature_483_residues
SQNKTLTTASGAPVADNQNSRSSGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITQYTSAKLFS
AVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQM
MWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLISAQGERHWVKWHYKTKQGIKNLAPADAARLAGTDPDYA
QRDLFEAIERGDFPKWSVCIQIMTEAQAAAHYENPFDVTKTWSQKEFPLIEVGELELNRNPLNYFAEVEQAAFGPSNMVP
GVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRSPVNTYQRDGSMAFGSNGGAAPNYEPNSYVESPKQAPHYAEP
ALALSGAADRYDHREDSDYYSHAGALFRLMSDEQKALLVSNIAGAMGGVSSDVIDRQLQHFYKADPAYGEAIAKLLNVQL
NEV

Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family [H]

Homologues:

Organism=Homo sapiens, GI4557014, Length=474, Percent_Identity=55.4852320675106, Blast_Score=551, Evalue=1e-157,
Organism=Escherichia coli, GI48994891, Length=500, Percent_Identity=41.4, Blast_Score=365, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI71998444, Length=477, Percent_Identity=52.6205450733753, Blast_Score=531, Evalue=1e-151,
Organism=Caenorhabditis elegans, GI25147792, Length=474, Percent_Identity=51.0548523206751, Blast_Score=511, Evalue=1e-145,
Organism=Caenorhabditis elegans, GI25151141, Length=472, Percent_Identity=51.4830508474576, Blast_Score=510, Evalue=1e-145,
Organism=Saccharomyces cerevisiae, GI6320462, Length=491, Percent_Identity=48.4725050916497, Blast_Score=449, Evalue=1e-127,
Organism=Saccharomyces cerevisiae, GI6321525, Length=534, Percent_Identity=37.8277153558052, Blast_Score=342, Evalue=9e-95,
Organism=Drosophila melanogaster, GI17981717, Length=477, Percent_Identity=52.6205450733753, Blast_Score=520, Evalue=1e-148,
Organism=Drosophila melanogaster, GI19920968, Length=479, Percent_Identity=46.3465553235908, Blast_Score=467, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002226
- InterPro:   IPR020835
- InterPro:   IPR010582
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 54007; Mature: 53875

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNKTLTTASGAPVADNQNSRSSGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSG
CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHCCCCCC
AYGTFTVTRDITQYTSAKLFSAVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEE
CEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEC
GNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQMMWDFWSHSPEALHQVTILF
CCEEEECCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHEEEEEE
SDRGIPDGYRHMHGFGSHTYSLISAQGERHWVKWHYKTKQGIKNLAPADAARLAGTDPDY
ECCCCCHHHHHHHCCCCHHHHEEECCCCCEEEEEEECHHHHHHHCCCCHHHHHCCCCCCH
AQRDLFEAIERGDFPKWSVCIQIMTEAQAAAHYENPFDVTKTWSQKEFPLIEVGELELNR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEECCEEECC
NPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRS
CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEECCHHEEECCCCCCCCCCCCCC
PVNTYQRDGSMAFGSNGGAAPNYEPNSYVESPKQAPHYAEPALALSGAADRYDHREDSDY
CHHHHHCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEECCCHHHCCCCCCCHH
YSHAGALFRLMSDEQKALLVSNIAGAMGGVSSDVIDRQLQHFYKADPAYGEAIAKLLNVQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LNEV
HCCC
>Mature Secondary Structure 
SQNKTLTTASGAPVADNQNSRSSGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSG
CCCCEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHCCCCCC
AYGTFTVTRDITQYTSAKLFSAVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEE
CEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEC
GNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQMMWDFWSHSPEALHQVTILF
CCEEEECCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHEEEEEE
SDRGIPDGYRHMHGFGSHTYSLISAQGERHWVKWHYKTKQGIKNLAPADAARLAGTDPDY
ECCCCCHHHHHHHCCCCHHHHEEECCCCCEEEEEEECHHHHHHHCCCCHHHHHCCCCCCH
AQRDLFEAIERGDFPKWSVCIQIMTEAQAAAHYENPFDVTKTWSQKEFPLIEVGELELNR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEECCEEECC
NPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRS
CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEECCHHEEECCCCCCCCCCCCCC
PVNTYQRDGSMAFGSNGGAAPNYEPNSYVESPKQAPHYAEPALALSGAADRYDHREDSDY
CHHHHHCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEECCCHHHCCCCCCCHH
YSHAGALFRLMSDEQKALLVSNIAGAMGGVSSDVIDRQLQHFYKADPAYGEAIAKLLNVQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LNEV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA