| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yecE [C]
Identifier: 77461256
GI number: 77461256
Start: 5672240
End: 5673166
Strand: Direct
Name: yecE [C]
Synonym: Pfl01_5035
Alternate gene names: 77461256
Gene position: 5672240-5673166 (Clockwise)
Preceding gene: 77461255
Following gene: 77461257
Centisome position: 88.1
GC content: 61.17
Gene sequence:
>927_bases ATGGCTACGATTCACATCGGTATTTCAGGCTGGCGTTACGCCCCGTGGCGCGGGGACTTTTACCCCAAGGGGCTGGCGCA GAAACGCGAATTGCAGTTCGCCTCACGGGCGGTCAACAGCATCGAAATCAACGGATCGTTCTACGCCCTGCAACGGCCCG AACGCTACGCCCAGTGGTACGCCGAAACGCCGGATGACTTCGTGTTCAGCATCAAGGCGCCCCGCTTCATCACCCACATC CGCCGCCTGCGCGATATCGAGAAACCCCTGGCCAATTTCTTTGCCTCCGGGGTGCTGGAATTGAAGGAAAAATTCGGCCC GATCCTCTGGCAGTTCCCGCCCAACTTCACATTCGACCCCGAACGTTTCGAAGCCTTTCTCGACCAGTTGCCCCACGACA CCCAGGCTGCCGCCGACCTCGCCCGCCAGCACGATTCACACCTGCACGGCCATGCGAGCATGAAGGCCTACGGCAAAAAA CCGCTGCGCCATGCCGTGGAAATCCGCAACGACAGTTTCATCGACCCCGACTTCGTGCGCCTGCTCAAACGCTACAACAC CGCGCTGGTGATTGCCGACACCGCCGGGAAATGGCCGTACCGCGAAGACCTGACCAGCGATTTCGTCTACCTGCGCCTGC ACGGTGCCGAAGAGCTCTACGCCAGCGGTTACACCCGTGCAGCGCTGCAACGCTGGGCCGAACGGATCGATGCCTGGCAC CATGGCCGGCAACCGCGCGATGCCCATTTGATCGCGCCGCGCCTGAAACCTCGGGCCCGCAAATCCCGCGAGGTTTTCTG CTACTTCGACAACGACATCAAGGTTCGCGCGCCTTTCGATGCCCGCAGCCTTTTGCAGCGCTTCGATCTGGATAAACACC TCGAAACCGTGCCCGGTGAACTGCCCGCCGATGGAGTACTCGCATGA
Upstream 100 bases:
>100_bases CAAGCCAGCCCGACCGTCCGTAATCCCGTCGAAACTTTCCCCGACCGCCCGCAGTCATCCACTGACAGAGGCCGTATGGG GACTTTCGACGGGAGGCGGC
Downstream 100 bases:
>100_bases GCATTCCCGAGCCGCTCGGCTTCACCGACGAGCAGTCCACGGTCATCACCACGGTGCGCCGTTTCACCGTGCTGACGGTC AACACCCACAAGGGTTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MATIHIGISGWRYAPWRGDFYPKGLAQKRELQFASRAVNSIEINGSFYALQRPERYAQWYAETPDDFVFSIKAPRFITHI RRLRDIEKPLANFFASGVLELKEKFGPILWQFPPNFTFDPERFEAFLDQLPHDTQAAADLARQHDSHLHGHASMKAYGKK PLRHAVEIRNDSFIDPDFVRLLKRYNTALVIADTAGKWPYREDLTSDFVYLRLHGAEELYASGYTRAALQRWAERIDAWH HGRQPRDAHLIAPRLKPRARKSREVFCYFDNDIKVRAPFDARSLLQRFDLDKHLETVPGELPADGVLA
Sequences:
>Translated_308_residues MATIHIGISGWRYAPWRGDFYPKGLAQKRELQFASRAVNSIEINGSFYALQRPERYAQWYAETPDDFVFSIKAPRFITHI RRLRDIEKPLANFFASGVLELKEKFGPILWQFPPNFTFDPERFEAFLDQLPHDTQAAADLARQHDSHLHGHASMKAYGKK PLRHAVEIRNDSFIDPDFVRLLKRYNTALVIADTAGKWPYREDLTSDFVYLRLHGAEELYASGYTRAALQRWAERIDAWH HGRQPRDAHLIAPRLKPRARKSREVFCYFDNDIKVRAPFDARSLLQRFDLDKHLETVPGELPADGVLA >Mature_307_residues ATIHIGISGWRYAPWRGDFYPKGLAQKRELQFASRAVNSIEINGSFYALQRPERYAQWYAETPDDFVFSIKAPRFITHIR RLRDIEKPLANFFASGVLELKEKFGPILWQFPPNFTFDPERFEAFLDQLPHDTQAAADLARQHDSHLHGHASMKAYGKKP LRHAVEIRNDSFIDPDFVRLLKRYNTALVIADTAGKWPYREDLTSDFVYLRLHGAEELYASGYTRAALQRWAERIDAWHH GRQPRDAHLIAPRLKPRARKSREVFCYFDNDIKVRAPFDARSLLQRFDLDKHLETVPGELPADGVLA
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788175, Length=248, Percent_Identity=25.8064516129032, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35789; Mature: 35658
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIHIGISGWRYAPWRGDFYPKGLAQKRELQFASRAVNSIEINGSFYALQRPERYAQWY CEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCHHHHHHH AETPDDFVFSIKAPRFITHIRRLRDIEKPLANFFASGVLELKEKFGPILWQFPPNFTFDP CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCH ERFEAFLDQLPHDTQAAADLARQHDSHLHGHASMKAYGKKPLRHAVEIRNDSFIDPDFVR HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHH LLKRYNTALVIADTAGKWPYREDLTSDFVYLRLHGAEELYASGYTRAALQRWAERIDAWH HHHHCCCEEEEEECCCCCCCHHHCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHH HGRQPRDAHLIAPRLKPRARKSREVFCYFDNDIKVRAPFDARSLLQRFDLDKHLETVPGE CCCCCCCCEEECCCCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHCCHHHHHHHCCCC LPADGVLA CCCCCCCC >Mature Secondary Structure ATIHIGISGWRYAPWRGDFYPKGLAQKRELQFASRAVNSIEINGSFYALQRPERYAQWY EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCHHHHHHH AETPDDFVFSIKAPRFITHIRRLRDIEKPLANFFASGVLELKEKFGPILWQFPPNFTFDP CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCH ERFEAFLDQLPHDTQAAADLARQHDSHLHGHASMKAYGKKPLRHAVEIRNDSFIDPDFVR HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHH LLKRYNTALVIADTAGKWPYREDLTSDFVYLRLHGAEELYASGYTRAALQRWAERIDAWH HHHHCCCEEEEEECCCCCCCHHHCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHH HGRQPRDAHLIAPRLKPRARKSREVFCYFDNDIKVRAPFDARSLLQRFDLDKHLETVPGE CCCCCCCCEEECCCCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHCCHHHHHHHCCCC LPADGVLA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA