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The map label for this gene is ybhP [H]

Identifier: 77461257

GI number: 77461257

Start: 5673163

End: 5673960

Strand: Direct

Name: ybhP [H]

Synonym: Pfl01_5036

Alternate gene names: 77461257

Gene position: 5673163-5673960 (Clockwise)

Preceding gene: 77461256

Following gene: 77461258

Centisome position: 88.11

GC content: 61.4

Gene sequence:

>798_bases
ATGAGCATTCCCGAGCCGCTCGGCTTCACCGACGAGCAGTCCACGGTCATCACCACGGTGCGCCGTTTCACCGTGCTGAC
GGTCAACACCCACAAGGGTTTCACCGCACTGAACCGGCGTTTCATCCTGCCGGAACTGCGCGAAGCGGTGCGCAGCGTGT
CCGCCGATGTGGTGTTTCTTCAGGAAGTCCACGGCACCCACGAACATCATCCCAAGCGCTACAACAATTGGCCGACGATG
CCGCAGTACGAATTTCTCGCCGACAGTCTCTGGCCGCAGTTCGCCTACGGGCGCAACGCCGTGTACCCGGAGGGCGATCA
TGGCAATGCAGTGCTGTCGAAATTCCAGATCGTGCGCCATGACAACCTCGACGTTTCGATCAGCGGCCATGAAAACCGGG
GGCTGCTGCACTGTGTGCTGCGCCTGCCGGGAGACGACCGTGAAGTACATGCGATCTGCGTCCACCTGGGCCTGCGCGAA
AGCCATCGCAACGCTCAGTTGGCTCTGCTGAAAAAGCGCCTGGCCGAACTGCCCGAGGATGCGCCGGTGATCGTCGCCGG
CGATTTCAACGACTGGCGCCAGCGCGCCGATGCCTTGCTTGAACCCTGTGGCCTGCGTGAAGTGTTTGCGGCGCATCACG
GCCGGTCGGCACGCAGTTTTCCCGCACGTCTGCCATTGCTGCGCCTGGACCGGATCTACGTAAGCAACCTCAAGGCCAGT
CAGCCAAAAGTACTGGCGAACCGTCCCTGGTCACACCTTTCCGACCACGCACCGCTATCGGTGGAGATTGAACTATGA

Upstream 100 bases:

>100_bases
TTCGCGCGCCTTTCGATGCCCGCAGCCTTTTGCAGCGCTTCGATCTGGATAAACACCTCGAAACCGTGCCCGGTGAACTG
CCCGCCGATGGAGTACTCGC

Downstream 100 bases:

>100_bases
GCAGTGCACCGTTGGAGAAATCCGCCGTGGAGCCCGTCAGCATCACCCCGCCCGTGCGCGAGCCCGGCACCGTCGATGTC
GAGTATCGCTGGCAGGGCAA

Product: aminoacyl-tRNA hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSIPEPLGFTDEQSTVITTVRRFTVLTVNTHKGFTALNRRFILPELREAVRSVSADVVFLQEVHGTHEHHPKRYNNWPTM
PQYEFLADSLWPQFAYGRNAVYPEGDHGNAVLSKFQIVRHDNLDVSISGHENRGLLHCVLRLPGDDREVHAICVHLGLRE
SHRNAQLALLKKRLAELPEDAPVIVAGDFNDWRQRADALLEPCGLREVFAAHHGRSARSFPARLPLLRLDRIYVSNLKAS
QPKVLANRPWSHLSDHAPLSVEIEL

Sequences:

>Translated_265_residues
MSIPEPLGFTDEQSTVITTVRRFTVLTVNTHKGFTALNRRFILPELREAVRSVSADVVFLQEVHGTHEHHPKRYNNWPTM
PQYEFLADSLWPQFAYGRNAVYPEGDHGNAVLSKFQIVRHDNLDVSISGHENRGLLHCVLRLPGDDREVHAICVHLGLRE
SHRNAQLALLKKRLAELPEDAPVIVAGDFNDWRQRADALLEPCGLREVFAAHHGRSARSFPARLPLLRLDRIYVSNLKAS
QPKVLANRPWSHLSDHAPLSVEIEL
>Mature_264_residues
SIPEPLGFTDEQSTVITTVRRFTVLTVNTHKGFTALNRRFILPELREAVRSVSADVVFLQEVHGTHEHHPKRYNNWPTMP
QYEFLADSLWPQFAYGRNAVYPEGDHGNAVLSKFQIVRHDNLDVSISGHENRGLLHCVLRLPGDDREVHAICVHLGLRES
HRNAQLALLKKRLAELPEDAPVIVAGDFNDWRQRADALLEPCGLREVFAAHHGRSARSFPARLPLLRLDRIYVSNLKASQ
PKVLANRPWSHLSDHAPLSVEIEL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=244, Percent_Identity=62.2950819672131, Blast_Score=313, Evalue=8e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 30105; Mature: 29973

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPEPLGFTDEQSTVITTVRRFTVLTVNTHKGFTALNRRFILPELREAVRSVSADVVFL
CCCCCCCCCCCCCHHHHHEEEEEEEEEEECCCCHHHHCCEECCHHHHHHHHHHCCCEEEE
QEVHGTHEHHPKRYNNWPTMPQYEFLADSLWPQFAYGRNAVYPEGDHGNAVLSKFQIVRH
HHHHCCHHCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHEEE
DNLDVSISGHENRGLLHCVLRLPGDDREVHAICVHLGLRESHRNAQLALLKKRLAELPED
CCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHCCCC
APVIVAGDFNDWRQRADALLEPCGLREVFAAHHGRSARSFPARLPLLRLDRIYVSNLKAS
CCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC
QPKVLANRPWSHLSDHAPLSVEIEL
CCCEECCCCHHHCCCCCCEEEEEEC
>Mature Secondary Structure 
SIPEPLGFTDEQSTVITTVRRFTVLTVNTHKGFTALNRRFILPELREAVRSVSADVVFL
CCCCCCCCCCCCHHHHHEEEEEEEEEEECCCCHHHHCCEECCHHHHHHHHHHCCCEEEE
QEVHGTHEHHPKRYNNWPTMPQYEFLADSLWPQFAYGRNAVYPEGDHGNAVLSKFQIVRH
HHHHCCHHCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHEEE
DNLDVSISGHENRGLLHCVLRLPGDDREVHAICVHLGLRESHRNAQLALLKKRLAELPED
CCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHCCCC
APVIVAGDFNDWRQRADALLEPCGLREVFAAHHGRSARSFPARLPLLRLDRIYVSNLKAS
CCEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC
QPKVLANRPWSHLSDHAPLSVEIEL
CCCEECCCCHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]