| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461146
Identifier: 77461146
GI number: 77461146
Start: 5550148
End: 5550627
Strand: Reverse
Name: 77461146
Synonym: Pfl01_4925
Alternate gene names: NA
Gene position: 5550627-5550148 (Counterclockwise)
Preceding gene: 77461147
Following gene: 77461145
Centisome position: 86.21
GC content: 60.42
Gene sequence:
>480_bases GTGAAAAAAATCGCAGTGTTCGCCGATGTGCAGAACCTCTACTACACCGTGCGTCAGGCCTATGGTTGCCACTTCAACTA CGCGGCGCTGTGGGCGGATGTCAGCCAGCACGGGCAGATCGTCGAGGCCTACGCCTATGCCATCGACCGGGGCGACAGCA AACAGCAGCAGTTCCAGCAGATCCTGCGCAACCTCGGTTTCACCGTAAAACTCAAACCCTACATCCAGCGCAGTGACGGC TCGGCCAAGGGCGACTGGGACGTGGGCATCACCCTCGACATCATGGACGCCGCCGATCACGTCGACGAAATCGTCCTGGC CTCCGGTGATGGCGATTTCGACATGCTGCTCGAACGCATCATCAACAAACACGGCGTGCAAGCGGTGGCCTACGGCGTTC CCGGCCTGACGGCCAACTCGCTGATCCGCGCCGCCAGCCGTTACGTGCCGATCGAAGGCGCGCTGCTGTTGAAAAATTGA
Upstream 100 bases:
>100_bases GATTATTCGCGGAACCTTCCTTCGGGCTGGCATACTGAGCGCCTTTTTCGGGCCTGGTGCCTGATCCGGCTCATGCGCGT CAGCGCTCACAGGAACTCCG
Downstream 100 bases:
>100_bases GCGCAAGCTCAAGCATTGATTTGGACGGAGTACCACCCGGTTTGGAACGCATTGCAGTCATCGACTTTGAAACCACCGGC ATCTCGCCGAGCAGCAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQFQQILRNLGFTVKLKPYIQRSDG SAKGDWDVGITLDIMDAADHVDEIVLASGDGDFDMLLERIINKHGVQAVAYGVPGLTANSLIRAASRYVPIEGALLLKN
Sequences:
>Translated_159_residues MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQFQQILRNLGFTVKLKPYIQRSDG SAKGDWDVGITLDIMDAADHVDEIVLASGDGDFDMLLERIINKHGVQAVAYGVPGLTANSLIRAASRYVPIEGALLLKN >Mature_159_residues MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQFQQILRNLGFTVKLKPYIQRSDG SAKGDWDVGITLDIMDAADHVDEIVLASGDGDFDMLLERIINKHGVQAVAYGVPGLTANSLIRAASRYVPIEGALLLKN
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17609; Mature: 17609
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQFQQ CCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH ILRNLGFTVKLKPYIQRSDGSAKGDWDVGITLDIMDAADHVDEIVLASGDGDFDMLLERI HHHHCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCHHHHHCEEEEECCCCCHHHHHHHH INKHGVQAVAYGVPGLTANSLIRAASRYVPIEGALLLKN HHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQFQQ CCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH ILRNLGFTVKLKPYIQRSDGSAKGDWDVGITLDIMDAADHVDEIVLASGDGDFDMLLERI HHHHCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCHHHHHCEEEEECCCCCHHHHHHHH INKHGVQAVAYGVPGLTANSLIRAASRYVPIEGALLLKN HHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA