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The map label for this gene is 77461147

Identifier: 77461147

GI number: 77461147

Start: 5550765

End: 5551523

Strand: Reverse

Name: 77461147

Synonym: Pfl01_4926

Alternate gene names: NA

Gene position: 5551523-5550765 (Counterclockwise)

Preceding gene: 77461150

Following gene: 77461146

Centisome position: 86.23

GC content: 63.11

Gene sequence:

>759_bases
ATGAACAGCGAAGAACAAACCCTGATCGATGGACTGTTTTCCCGGCTGCAACAGGCCGAAACGGAGGCAGCCCCGCGCGA
CGCCCAGGCCGAGGCGCGGATCAAGGAACACCTGACGCGCCAGCCGGCCGCAGGTTATTTCATGACCCAGGCGATTCTGG
TGCAGGAGGCTGCCCTCAAGAGCCTCGACGAACAAAACAAACAACTGACTCAACAGGTCAAGCAATTGCAGGCAGAACTG
CAGTCGGCCAAGGCGCAGAGCGCGCTGCCGGCCTCCAGCGGTGGCGGCTTCCTGTCGAGCATCTTCGGTGGCAGCAGCCC
GCGCCCGGCACCGACCCAGAGCGCCCCGGCCTCCACTGGCGGCTGGCGTGAACCGGCACCGCAGCAGAACTTCGGTGCGC
CCGCGCCGCAACAGAACTTCGGCGCGCCACCACCGGGTTATGGCCAGCAACAAGCGGCCCCGGCGGCGGGCAGCAGCTTC
CTCGGCGGCGCCCTTAAAACAGCGGCCGGTGTGGCCGGTGGCGTGATGCTGGCGCAAGGCATCAGCAGCCTGTTCCATCA
CAACCAGCAGCCGGAAGAAATCGTCGAAGTCATCAAGGAAGAGCCGGCTCAAGTCAACGACCAGAGCAACAACGGCTGGG
GTGATGATCAGCGCATGGCCAACAACGACTCCTACGGTAATGACCAGGGCGGCTTTACCGACACCGACTACAGCGATGAC
AACTCATCGTTCTTCGATGACGACGATTCCTTCGTCTGA

Upstream 100 bases:

>100_bases
AAAGGTCATTGAAACATTCTGTTGCTGCCTCCATTACAGAGGTGCGCCTTCTCCGACGTGGAGGAGGGCAACGTTATCCC
CGGCAATCTACGAGGTCGCC

Downstream 100 bases:

>100_bases
CTCACCATTCGTCCGGGGCGCCTGAGCGCCCCGGGCCGATTATTCGCGGAACCTTCCTTCGGGCTGGCATACTGAGCGCC
TTTTTCGGGCCTGGTGCCTG

Product: periplasmic ligand-binding sensor protein

Products: NA

Alternate protein names: yba2 [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNSEEQTLIDGLFSRLQQAETEAAPRDAQAEARIKEHLTRQPAAGYFMTQAILVQEAALKSLDEQNKQLTQQVKQLQAEL
QSAKAQSALPASSGGGFLSSIFGGSSPRPAPTQSAPASTGGWREPAPQQNFGAPAPQQNFGAPPPGYGQQQAAPAAGSSF
LGGALKTAAGVAGGVMLAQGISSLFHHNQQPEEIVEVIKEEPAQVNDQSNNGWGDDQRMANNDSYGNDQGGFTDTDYSDD
NSSFFDDDDSFV

Sequences:

>Translated_252_residues
MNSEEQTLIDGLFSRLQQAETEAAPRDAQAEARIKEHLTRQPAAGYFMTQAILVQEAALKSLDEQNKQLTQQVKQLQAEL
QSAKAQSALPASSGGGFLSSIFGGSSPRPAPTQSAPASTGGWREPAPQQNFGAPAPQQNFGAPPPGYGQQQAAPAAGSSF
LGGALKTAAGVAGGVMLAQGISSLFHHNQQPEEIVEVIKEEPAQVNDQSNNGWGDDQRMANNDSYGNDQGGFTDTDYSDD
NSSFFDDDDSFV
>Mature_252_residues
MNSEEQTLIDGLFSRLQQAETEAAPRDAQAEARIKEHLTRQPAAGYFMTQAILVQEAALKSLDEQNKQLTQQVKQLQAEL
QSAKAQSALPASSGGGFLSSIFGGSSPRPAPTQSAPASTGGWREPAPQQNFGAPAPQQNFGAPPPGYGQQQAAPAAGSSF
LGGALKTAAGVAGGVMLAQGISSLFHHNQQPEEIVEVIKEEPAQVNDQSNNGWGDDQRMANNDSYGNDQGGFTDTDYSDD
NSSFFDDDDSFV

Specific function: Unknown

COG id: COG3416

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018648 [H]

Pfam domain/function: PF09849 DUF2076 [H]

EC number: NA

Molecular weight: Translated: 26631; Mature: 26631

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEEQTLIDGLFSRLQQAETEAAPRDAQAEARIKEHLTRQPAAGYFMTQAILVQEAALK
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SLDEQNKQLTQQVKQLQAELQSAKAQSALPASSGGGFLSSIFGGSSPRPAPTQSAPASTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
GWREPAPQQNFGAPAPQQNFGAPPPGYGQQQAAPAAGSSFLGGALKTAAGVAGGVMLAQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ISSLFHHNQQPEEIVEVIKEEPAQVNDQSNNGWGDDQRMANNDSYGNDQGGFTDTDYSDD
HHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
NSSFFDDDDSFV
CCCCCCCCCCCC
>Mature Secondary Structure
MNSEEQTLIDGLFSRLQQAETEAAPRDAQAEARIKEHLTRQPAAGYFMTQAILVQEAALK
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SLDEQNKQLTQQVKQLQAELQSAKAQSALPASSGGGFLSSIFGGSSPRPAPTQSAPASTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
GWREPAPQQNFGAPAPQQNFGAPPPGYGQQQAAPAAGSSFLGGALKTAAGVAGGVMLAQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ISSLFHHNQQPEEIVEVIKEEPAQVNDQSNNGWGDDQRMANNDSYGNDQGGFTDTDYSDD
HHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
NSSFFDDDDSFV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]