Click here to switch to the map view.

The map label for this gene is 77461130

Identifier: 77461130

GI number: 77461130

Start: 5532059

End: 5532874

Strand: Reverse

Name: 77461130

Synonym: Pfl01_4909

Alternate gene names: NA

Gene position: 5532874-5532059 (Counterclockwise)

Preceding gene: 77461131

Following gene: 77461129

Centisome position: 85.94

GC content: 62.13

Gene sequence:

>816_bases
ATGAGCGAGCGAATTCTGTCCCTGGCCAGCCTGACCGTCCTCGAATTGTCGCCACCCTACATGATCGAGGTCGCGGCTCG
TGCCGGTTACAGCCATGTCGGCCTGCGCCTGGAGCCGGCAACGGCCGAGGAATATCATTTTCCGCTGGTAGCCGATGGCG
ATTTGCGGCGTCAGACACTGGCGCGTTTGCGTGACACCGGAATCGGCGTGCTCGACGTGGAAATCCTTCGATTGAAGCCG
CAGACAGTGGTCGCGGATTTGGAGCGGCTGCTCAGCGTCGGCGCGGAGTTCGGTGCCAGTGAGTTGCTGGTCGCCGGTAA
CGATCCCGACGAGCAGCGGCTCACCGATCATTTCGCGGCACTGTGCGATCTGGCCGCGCCCTACGGTTTGCATCCGCATC
TGGAATTCATGCCATGGACCGATGCGCGCAATCTCGAACAGGCATTGCGCGTCGTCGACAACGCCGGGCGCGAAAACGGT
GCGGTGCTGGTGGATGCGTTTCACTTTGACCGCTCCGGTTCGCGGCTGGAAGATCTGGCCGGTGTGCCGGCTTCGCGGCT
GCGCTACGCACAGTTGTGCGATGTTGCCGGGCCGAGGCCAACGGACATGGCCGAGATCTTGCGTCAGGCTCGCAATGAGC
GCCGGTTTCCCGGCGAGGGCGATTGTGACCTGATTGGGTTGTTGCACAGTCTTCCGGCTAACCTTCCCCTGAGTCTGGAA
ATTCCCACGGTCAAATTGCTGGAGCAGGGCGTGAGCGGATTGCAGCGGGCGCAAATGGCGATCGACCGGACACGGGAATT
GTTGGCCCGGCTTTAA

Upstream 100 bases:

>100_bases
GGCTATTCCCACAACAATCACAAGAGGATCGCACCTTGAACCCGCCCCTTCGAATCGGCATTGGCTACGCCACTTCACCG
GAATTGGCCGAGGCGCGGCC

Downstream 100 bases:

>100_bases
GTCTGCTTCAAGGGGCGAGGGCGCCTGCGTCCTCGTCACCGTTTATTTTTCATTCAGAGAGAGCCAATGACCGTCAGCAC
TCCGCTTTCCGGCGTCAACC

Product: xylose isomerase-like TIM barrel domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; AP Endonuclease Family; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase-Like Protein; Sugar Phosphate Isomerase/ Epimerase; Sugar Phosphate Isomerases/Epimerase; Xylose Isomerase-Type TIM-Barrel Protein; IolI Protein; Sugar Phosphate Isomerases/Epimerases

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSERILSLASLTVLELSPPYMIEVAARAGYSHVGLRLEPATAEEYHFPLVADGDLRRQTLARLRDTGIGVLDVEILRLKP
QTVVADLERLLSVGAEFGASELLVAGNDPDEQRLTDHFAALCDLAAPYGLHPHLEFMPWTDARNLEQALRVVDNAGRENG
AVLVDAFHFDRSGSRLEDLAGVPASRLRYAQLCDVAGPRPTDMAEILRQARNERRFPGEGDCDLIGLLHSLPANLPLSLE
IPTVKLLEQGVSGLQRAQMAIDRTRELLARL

Sequences:

>Translated_271_residues
MSERILSLASLTVLELSPPYMIEVAARAGYSHVGLRLEPATAEEYHFPLVADGDLRRQTLARLRDTGIGVLDVEILRLKP
QTVVADLERLLSVGAEFGASELLVAGNDPDEQRLTDHFAALCDLAAPYGLHPHLEFMPWTDARNLEQALRVVDNAGRENG
AVLVDAFHFDRSGSRLEDLAGVPASRLRYAQLCDVAGPRPTDMAEILRQARNERRFPGEGDCDLIGLLHSLPANLPLSLE
IPTVKLLEQGVSGLQRAQMAIDRTRELLARL
>Mature_270_residues
SERILSLASLTVLELSPPYMIEVAARAGYSHVGLRLEPATAEEYHFPLVADGDLRRQTLARLRDTGIGVLDVEILRLKPQ
TVVADLERLLSVGAEFGASELLVAGNDPDEQRLTDHFAALCDLAAPYGLHPHLEFMPWTDARNLEQALRVVDNAGRENGA
VLVDAFHFDRSGSRLEDLAGVPASRLRYAQLCDVAGPRPTDMAEILRQARNERRFPGEGDCDLIGLLHSLPANLPLSLEI
PTVKLLEQGVSGLQRAQMAIDRTRELLARL

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29795; Mature: 29664

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERILSLASLTVLELSPPYMIEVAARAGYSHVGLRLEPATAEEYHFPLVADGDLRRQTL
CCCHHHHHHHEEEEECCCCCEEEEHHHCCCCCCCEEECCCCCCCCCCCEEECCHHHHHHH
ARLRDTGIGVLDVEILRLKPQTVVADLERLLSVGAEFGASELLVAGNDPDEQRLTDHFAA
HHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
LCDLAAPYGLHPHLEFMPWTDARNLEQALRVVDNAGRENGAVLVDAFHFDRSGSRLEDLA
HHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
GVPASRLRYAQLCDVAGPRPTDMAEILRQARNERRFPGEGDCDLIGLLHSLPANLPLSLE
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEE
IPTVKLLEQGVSGLQRAQMAIDRTRELLARL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SERILSLASLTVLELSPPYMIEVAARAGYSHVGLRLEPATAEEYHFPLVADGDLRRQTL
CCHHHHHHHEEEEECCCCCEEEEHHHCCCCCCCEEECCCCCCCCCCCEEECCHHHHHHH
ARLRDTGIGVLDVEILRLKPQTVVADLERLLSVGAEFGASELLVAGNDPDEQRLTDHFAA
HHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
LCDLAAPYGLHPHLEFMPWTDARNLEQALRVVDNAGRENGAVLVDAFHFDRSGSRLEDLA
HHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
GVPASRLRYAQLCDVAGPRPTDMAEILRQARNERRFPGEGDCDLIGLLHSLPANLPLSLE
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEE
IPTVKLLEQGVSGLQRAQMAIDRTRELLARL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA