| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461121
Identifier: 77461121
GI number: 77461121
Start: 5523743
End: 5524171
Strand: Reverse
Name: 77461121
Synonym: Pfl01_4900
Alternate gene names: NA
Gene position: 5524171-5523743 (Counterclockwise)
Preceding gene: 77461125
Following gene: 77461120
Centisome position: 85.8
GC content: 58.04
Gene sequence:
>429_bases ATGAAGGTATGCAGTTACAAAGGACTGTCAGTGGTGATCATGTTGCATGACGAACATTGTCCGCCCCACGCACATGTGGA TGCAGGCGCCTGGAGCGCCCGCTTCAAATTCAGTTTCTGGCACAACGGCGTTGAACTGTGGGATGTGCTGCCGTTGTCGC ATCGACCGCCGGTCAGCCTGCTTGAAGGGCTGCGCCAGTCGCTGCGTGAAACCGATCATCTGCGGCGGGCGCGCTGGATC TGGTGGACTCGGTTGCGAACGGCCTGTCTCGACAATCAATGGTGGGACGGGCAGTCGAATCAGGTGGCGGTGCTGCGGGA AGTCACCAGCACGAGTTTCAGGATTGGCTCGGCGTATTACGAGCCGGAGGTCAACAAAACCCTGTTGGCCCTGGTCGGCG CCAACGAAGGAGTGGAAATAGAATTATGA
Upstream 100 bases:
>100_bases TAGGCTCGAAAGGTAACGGCCACAACAGGCGTTGGCGCCGATGGTCGGATTTGCCAGGGAATGGCAAGTGTTGAAACTTT AAACCTAACGGATGGGTAGC
Downstream 100 bases:
>100_bases AAACAGTCAAAGCCACGCTGCACGCGGATCGACCCGTCACGGAAAAGCGTCTGGACGAAGCGGTCGACCGTGGTGGCGTG CGCCGACGCAGCAGCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKVCSYKGLSVVIMLHDEHCPPHAHVDAGAWSARFKFSFWHNGVELWDVLPLSHRPPVSLLEGLRQSLRETDHLRRARWI WWTRLRTACLDNQWWDGQSNQVAVLREVTSTSFRIGSAYYEPEVNKTLLALVGANEGVEIEL
Sequences:
>Translated_142_residues MKVCSYKGLSVVIMLHDEHCPPHAHVDAGAWSARFKFSFWHNGVELWDVLPLSHRPPVSLLEGLRQSLRETDHLRRARWI WWTRLRTACLDNQWWDGQSNQVAVLREVTSTSFRIGSAYYEPEVNKTLLALVGANEGVEIEL >Mature_142_residues MKVCSYKGLSVVIMLHDEHCPPHAHVDAGAWSARFKFSFWHNGVELWDVLPLSHRPPVSLLEGLRQSLRETDHLRRARWI WWTRLRTACLDNQWWDGQSNQVAVLREVTSTSFRIGSAYYEPEVNKTLLALVGANEGVEIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16393; Mature: 16393
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVCSYKGLSVVIMLHDEHCPPHAHVDAGAWSARFKFSFWHNGVELWDVLPLSHRPPVSL CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCHHH LEGLRQSLRETDHLRRARWIWWTRLRTACLDNQWWDGQSNQVAVLREVTSTSFRIGSAYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCEEECCEEE EPEVNKTLLALVGANEGVEIEL CCCCCCEEEEEECCCCCEEEEC >Mature Secondary Structure MKVCSYKGLSVVIMLHDEHCPPHAHVDAGAWSARFKFSFWHNGVELWDVLPLSHRPPVSL CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCHHH LEGLRQSLRETDHLRRARWIWWTRLRTACLDNQWWDGQSNQVAVLREVTSTSFRIGSAYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCEEECCEEE EPEVNKTLLALVGANEGVEIEL CCCCCCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA