| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461120
Identifier: 77461120
GI number: 77461120
Start: 5523300
End: 5523746
Strand: Reverse
Name: 77461120
Synonym: Pfl01_4899
Alternate gene names: NA
Gene position: 5523746-5523300 (Counterclockwise)
Preceding gene: 77461121
Following gene: 77461117
Centisome position: 85.79
GC content: 60.18
Gene sequence:
>447_bases ATGAAAACAGTCAAAGCCACGCTGCACGCGGATCGACCCGTCACGGAAAAGCGTCTGGACGAAGCGGTCGACCGTGGTGG CGTGCGCCGACGCAGCAGCCTGCAAGCCGTGTCGGTGGCCTTTCAGAAACCGTGTCTGATTATCCACTTCGAAGACAACA GTGGCGTGCTGCTCCCAGTGAATCTCTACCGGGAATTCGATGATTTCGAACCGGAAGACTTCACTGGATTGAACGTTGGC TTTGCCGGCACAGCGCTCTGCCACGACGGCAAGGATTTGCAGGTTTCCATCGCCGGCATGATCTCGGCCAGTCAGCCACT GATGGCCATGGCAGCCTCGGTGATCGCCTCCCGCAATGGTCGCCAGAGCAGCACTGCGAAAGCTGAAGCTGCACGGGCCA ACGGCAGGAAGGGCGGGCGTCCGCGCAAGATCGATCCCGTGCCATGA
Upstream 100 bases:
>100_bases CCAGCACGAGTTTCAGGATTGGCTCGGCGTATTACGAGCCGGAGGTCAACAAAACCCTGTTGGCCCTGGTCGGCGCCAAC GAAGGAGTGGAAATAGAATT
Downstream 100 bases:
>100_bases ACAGGCACAAAAAAGCCGTCGATGAGGACGGCTTTCTTGTTTCTGGCACCTGCGATCAACGTCGGGTCAGCAGCACGCCG GATTCCATGTGGTGAGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKTVKATLHADRPVTEKRLDEAVDRGGVRRRSSLQAVSVAFQKPCLIIHFEDNSGVLLPVNLYREFDDFEPEDFTGLNVG FAGTALCHDGKDLQVSIAGMISASQPLMAMAASVIASRNGRQSSTAKAEAARANGRKGGRPRKIDPVP
Sequences:
>Translated_148_residues MKTVKATLHADRPVTEKRLDEAVDRGGVRRRSSLQAVSVAFQKPCLIIHFEDNSGVLLPVNLYREFDDFEPEDFTGLNVG FAGTALCHDGKDLQVSIAGMISASQPLMAMAASVIASRNGRQSSTAKAEAARANGRKGGRPRKIDPVP >Mature_148_residues MKTVKATLHADRPVTEKRLDEAVDRGGVRRRSSLQAVSVAFQKPCLIIHFEDNSGVLLPVNLYREFDDFEPEDFTGLNVG FAGTALCHDGKDLQVSIAGMISASQPLMAMAASVIASRNGRQSSTAKAEAARANGRKGGRPRKIDPVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15947; Mature: 15947
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVKATLHADRPVTEKRLDEAVDRGGVRRRSSLQAVSVAFQKPCLIIHFEDNSGVLLPV CCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEH NLYREFDDFEPEDFTGLNVGFAGTALCHDGKDLQVSIAGMISASQPLMAMAASVIASRNG HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCCC RQSSTAKAEAARANGRKGGRPRKIDPVP CCCCHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTVKATLHADRPVTEKRLDEAVDRGGVRRRSSLQAVSVAFQKPCLIIHFEDNSGVLLPV CCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEH NLYREFDDFEPEDFTGLNVGFAGTALCHDGKDLQVSIAGMISASQPLMAMAASVIASRNG HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCCC RQSSTAKAEAARANGRKGGRPRKIDPVP CCCCHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA