| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fsr [H]
Identifier: 77460978
GI number: 77460978
Start: 5360667
End: 5361884
Strand: Reverse
Name: fsr [H]
Synonym: Pfl01_4757
Alternate gene names: 77460978
Gene position: 5361884-5360667 (Counterclockwise)
Preceding gene: 77460984
Following gene: 77460970
Centisome position: 83.28
GC content: 59.77
Gene sequence:
>1218_bases ATGGCTATCAGCAATGTTCAGACCGCCGCTGCCTCGGCGTCCGCTCCTCCCCAGAGCAGCCCTTTGGTGATGCGCATCAT TGGCGCGGTGGCGCTGGCGCATTTGATCAATGACCTGATCCAGTCAGTGTTGCCGTCGATCTATCCGATGCTCAAGGCCA ACTATGGTTTGAGTTTTACCCAGGTCGGCCTGATTACCCTGACCTTCCAATTGACCGCTTCGCTGCTGCAGCCGTGGGTC GGTTATCACACCGATCGCCATCCGAAACCGTGGCTGTTGCCGGCAGGTTCTGTGTGCACCCTGATTGGCATCGTGATGAT GTCGATGGTTGGCAGTTTTCCGTTGATTCTGCTGGCGGCGGCGCTGATCGGCATTGGTTCATCAACCTTTCACCCCGAGG CTTCTCGTATCGCCCGCCTGGCTTCTGGTGGGCGTTTCGGTCTGGCGCAGTCGACGTTCCAGGTCGGTGGTAATGCCGGT TCGGCCTTCGGCCCGTTACTCGCGGCGGCGATCATCATTCCTTTCGGGCAGGGCAACGTGGCCTGGTTCGGCTTGTTCGC GGTGTTTGCGCTGTTCGTGCTCTATCGCATCAGCCGCTGGTACGCCCATCACCTGAACCTGTTCAAGCTCAAGGCCGGCC AGGCCGCCACTCACGGACTGTCGAAGGGCAGGGTGATCAGCGCTCTGGTGGTGCTCGGTCTGCTGGTGTTCTCCAAGTAC TTCTACATGGCCAGCCTGACCAGCTACTTCACCTTCTACCTGATCGAGAAGTTCGACCTGTCGGTTGCCAGTTCCCAATT GCACCTGTTCCTGTTCCTCGGCGCAGTGGCGGCGGGCACGTTCTTTGGCGGACCTATCGGCGACAAGATCGGGCGCAAGG CGGTGATCTGGTTCTCGATCCTTGGCGTGGCACCGTTCACGCTGCTGATGCCGCATGTCGACCTGTTCTGGACCAGCGTT CTGAGCGTGGTGATCGGTTTCATCCTCGCTTCAGCGTTCTCGGCGATCGTGGTGTACGCGCAGGAGCTGGTGCCGGGCAA CGTCGGAATGATTGCCGGGGTGTTCTTCGGTCTGATGTTCGGCTTTGGCGGGATTGGCGCGGCGTTGCTCGGGCATCTGG CGGACATCCACGGCATCGAATACGTGTACTTCCTGTGCTCGTTCCTGCCGCTGTTCGGGGTGCTGACGATCTTCCTGCCG AGAACCAAAAAAGCCTGA
Upstream 100 bases:
>100_bases AATAGTTCGTTAGCTGGCTAAGAGGATGGCGCTGACGCACCGAAAAATGGCACATTGACGCACCTGCCCGCGTGCACCCA TCTGCAGTCCGGAAATTCCC
Downstream 100 bases:
>100_bases CAGGCTGAATTTCGGGCAAAAAAAAGCCGCGTATCAACGCGGCTTTTTCTTGGGTGCAGCTTTTACACGTTGAAGCGGAA GTGCATCACGTCGCCGTCCT
Product: major facilitator transporter
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MAISNVQTAAASASAPPQSSPLVMRIIGAVALAHLINDLIQSVLPSIYPMLKANYGLSFTQVGLITLTFQLTASLLQPWV GYHTDRHPKPWLLPAGSVCTLIGIVMMSMVGSFPLILLAAALIGIGSSTFHPEASRIARLASGGRFGLAQSTFQVGGNAG SAFGPLLAAAIIIPFGQGNVAWFGLFAVFALFVLYRISRWYAHHLNLFKLKAGQAATHGLSKGRVISALVVLGLLVFSKY FYMASLTSYFTFYLIEKFDLSVASSQLHLFLFLGAVAAGTFFGGPIGDKIGRKAVIWFSILGVAPFTLLMPHVDLFWTSV LSVVIGFILASAFSAIVVYAQELVPGNVGMIAGVFFGLMFGFGGIGAALLGHLADIHGIEYVYFLCSFLPLFGVLTIFLP RTKKA
Sequences:
>Translated_405_residues MAISNVQTAAASASAPPQSSPLVMRIIGAVALAHLINDLIQSVLPSIYPMLKANYGLSFTQVGLITLTFQLTASLLQPWV GYHTDRHPKPWLLPAGSVCTLIGIVMMSMVGSFPLILLAAALIGIGSSTFHPEASRIARLASGGRFGLAQSTFQVGGNAG SAFGPLLAAAIIIPFGQGNVAWFGLFAVFALFVLYRISRWYAHHLNLFKLKAGQAATHGLSKGRVISALVVLGLLVFSKY FYMASLTSYFTFYLIEKFDLSVASSQLHLFLFLGAVAAGTFFGGPIGDKIGRKAVIWFSILGVAPFTLLMPHVDLFWTSV LSVVIGFILASAFSAIVVYAQELVPGNVGMIAGVFFGLMFGFGGIGAALLGHLADIHGIEYVYFLCSFLPLFGVLTIFLP RTKKA >Mature_404_residues AISNVQTAAASASAPPQSSPLVMRIIGAVALAHLINDLIQSVLPSIYPMLKANYGLSFTQVGLITLTFQLTASLLQPWVG YHTDRHPKPWLLPAGSVCTLIGIVMMSMVGSFPLILLAAALIGIGSSTFHPEASRIARLASGGRFGLAQSTFQVGGNAGS AFGPLLAAAIIIPFGQGNVAWFGLFAVFALFVLYRISRWYAHHLNLFKLKAGQAATHGLSKGRVISALVVLGLLVFSKYF YMASLTSYFTFYLIEKFDLSVASSQLHLFLFLGAVAAGTFFGGPIGDKIGRKAVIWFSILGVAPFTLLMPHVDLFWTSVL SVVIGFILASAFSAIVVYAQELVPGNVGMIAGVFFGLMFGFGGIGAALLGHLADIHGIEYVYFLCSFLPLFGVLTIFLPR TKKA
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=403, Percent_Identity=59.3052109181141, Blast_Score=452, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43163; Mature: 43032
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISNVQTAAASASAPPQSSPLVMRIIGAVALAHLINDLIQSVLPSIYPMLKANYGLSFT CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QVGLITLTFQLTASLLQPWVGYHTDRHPKPWLLPAGSVCTLIGIVMMSMVGSFPLILLAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH ALIGIGSSTFHPEASRIARLASGGRFGLAQSTFQVGGNAGSAFGPLLAAAIIIPFGQGNV HHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCH AWFGLFAVFALFVLYRISRWYAHHLNLFKLKAGQAATHGLSKGRVISALVVLGLLVFSKY HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHH FYMASLTSYFTFYLIEKFDLSVASSQLHLFLFLGAVAAGTFFGGPIGDKIGRKAVIWFSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHH LGVAPFTLLMPHVDLFWTSVLSVVIGFILASAFSAIVVYAQELVPGNVGMIAGVFFGLMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GFGGIGAALLGHLADIHGIEYVYFLCSFLPLFGVLTIFLPRTKKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AISNVQTAAASASAPPQSSPLVMRIIGAVALAHLINDLIQSVLPSIYPMLKANYGLSFT CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QVGLITLTFQLTASLLQPWVGYHTDRHPKPWLLPAGSVCTLIGIVMMSMVGSFPLILLAA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH ALIGIGSSTFHPEASRIARLASGGRFGLAQSTFQVGGNAGSAFGPLLAAAIIIPFGQGNV HHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCH AWFGLFAVFALFVLYRISRWYAHHLNLFKLKAGQAATHGLSKGRVISALVVLGLLVFSKY HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHH FYMASLTSYFTFYLIEKFDLSVASSQLHLFLFLGAVAAGTFFGGPIGDKIGRKAVIWFSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHH LGVAPFTLLMPHVDLFWTSVLSVVIGFILASAFSAIVVYAQELVPGNVGMIAGVFFGLMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GFGGIGAALLGHLADIHGIEYVYFLCSFLPLFGVLTIFLPRTKKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]