| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hemA [H]
Identifier: 77460970
GI number: 77460970
Start: 5352211
End: 5353497
Strand: Reverse
Name: hemA [H]
Synonym: Pfl01_4749
Alternate gene names: 77460970
Gene position: 5353497-5352211 (Counterclockwise)
Preceding gene: 77460978
Following gene: 77460969
Centisome position: 83.15
GC content: 62.08
Gene sequence:
>1287_bases ATGGCCTTCCTTGCACTCGGTATCAACCACAAGACTGCTTCAGTAGACGTCCGCGAGCGCGTGGCCTTTACCCCTGAGCA GCTGGTGGAGGCCTTGCAGCAGCTCTGCCGACTCACCGACAGCCGCGAAGCTGCGATCCTCTCCACCTGCAATCGCAGTG AGCTGTATATAGAACAGGATCAGCTTTCGGCCGATATCGTGCTGCGCTGGCTGGCCGACTATCACCATTTAAGCCTCGAT GAGCTGCGCGCGAGTGCTTATGTGCATGAAGATGATGCGGCAGTTCGTCACATGATGCGTGTCGCCTCCGGGCTCGACTC GCTGGTGCTGGGCGAACCGCAGATTCTCGGCCAGATGAAATCGGCCTACGCCGTGGCCCGCGAGGCCGGCACCATCGGGC CGCTGCTGGGGCGACTGTTCCAGGCGACCTTCAACGCCGCCAAGCAAGTACGTACCGACACCGCCATCGGCGAAAACCCG GTGTCCGTGGCGTTTGCCGCCGTCAGTCTGGCCAAACAGATTTTCAGCGACCTGCAACGCAGCCAGGCCCTGCTGATCGG CGCCGGCGAGACCATCACCCTGGTCGCCCGCCACCTGCATGAACTGGGGGTCAAGCGCATCGTGGTCGCCAACCGGACGC TGGAGCGCGCCAGCCTGCTGGCCGAGCAGTTCGGTGCCCACGCAGTGTTGCTCTCGGACATCCCGGCCGAACTGGTGCGC AGCGACATCGTCATCAGTTCTACCGCCAGTCAGTTGCCGATTCTCGGTAAAGGCGCGGTGGAAAGCGCGCTGAAGCTGCG CAAGCACAAGCCGATCTTCATGGTCGACATCGCCGTTCCCCGTGACATCGAGCCAGAAGTCGGCGAACTCGACGACGTTT ACCTCTATAGCGTCGACGATCTGCACGAAGTGGTCGCTGAAAACCTCAAGAGCCGTCAGGGCGCAGCGCAGGCGGCCGAA GAGATGGTTTCGGTCGGCGCCGACGATTTCATGGTGCGCCTGCGCGAGCTGGCGGCAGTCGATGTGCTCAAGGCCTATCG TCAACAGAGCGAACGCCTGCGCGACGAAGAACTGCAAAAGGCCCTGCGCCTGCTGGCCAATGGCGGCAACGCCGAAGACG TGCTCGGGCAACTGGCCCGTGGCCTGACCAACAAACTCCTGCACGCCCCGAGCGTGCAGTTGAAAAAGCTTTCTGCCGAA GGCCGCCTCGATGCGCTGGCCATGGCTCAGGAACTCTTTGCCCTCGAGGGCTCACCGGATAGCTTTTCGGATAAAAAACC GCAATGA
Upstream 100 bases:
>100_bases ATTATAGGGGCCGGCAATTGGGACAATAGTCAGCGGTAGTTGTTCTGAATCTGACGAAGTAGGACAATTGCCGGCTTCAC GTCACCATCAGCGACCTTGA
Downstream 100 bases:
>100_bases AAGCGTCACTGCTCAATAAGCTGGACATTCTCCAGGACCGTTTCGAGGAACTGACCGCGCTGCTCGGCGACGGCGAAGTC ATTTCCGACCAGACCAAATT
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MAFLALGINHKTASVDVRERVAFTPEQLVEALQQLCRLTDSREAAILSTCNRSELYIEQDQLSADIVLRWLADYHHLSLD ELRASAYVHEDDAAVRHMMRVASGLDSLVLGEPQILGQMKSAYAVAREAGTIGPLLGRLFQATFNAAKQVRTDTAIGENP VSVAFAAVSLAKQIFSDLQRSQALLIGAGETITLVARHLHELGVKRIVVANRTLERASLLAEQFGAHAVLLSDIPAELVR SDIVISSTASQLPILGKGAVESALKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEVVAENLKSRQGAAQAAE EMVSVGADDFMVRLRELAAVDVLKAYRQQSERLRDEELQKALRLLANGGNAEDVLGQLARGLTNKLLHAPSVQLKKLSAE GRLDALAMAQELFALEGSPDSFSDKKPQ
Sequences:
>Translated_428_residues MAFLALGINHKTASVDVRERVAFTPEQLVEALQQLCRLTDSREAAILSTCNRSELYIEQDQLSADIVLRWLADYHHLSLD ELRASAYVHEDDAAVRHMMRVASGLDSLVLGEPQILGQMKSAYAVAREAGTIGPLLGRLFQATFNAAKQVRTDTAIGENP VSVAFAAVSLAKQIFSDLQRSQALLIGAGETITLVARHLHELGVKRIVVANRTLERASLLAEQFGAHAVLLSDIPAELVR SDIVISSTASQLPILGKGAVESALKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEVVAENLKSRQGAAQAAE EMVSVGADDFMVRLRELAAVDVLKAYRQQSERLRDEELQKALRLLANGGNAEDVLGQLARGLTNKLLHAPSVQLKKLSAE GRLDALAMAQELFALEGSPDSFSDKKPQ >Mature_427_residues AFLALGINHKTASVDVRERVAFTPEQLVEALQQLCRLTDSREAAILSTCNRSELYIEQDQLSADIVLRWLADYHHLSLDE LRASAYVHEDDAAVRHMMRVASGLDSLVLGEPQILGQMKSAYAVAREAGTIGPLLGRLFQATFNAAKQVRTDTAIGENPV SVAFAAVSLAKQIFSDLQRSQALLIGAGETITLVARHLHELGVKRIVVANRTLERASLLAEQFGAHAVLLSDIPAELVRS DIVISSTASQLPILGKGAVESALKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDDLHEVVAENLKSRQGAAQAAEE MVSVGADDFMVRLRELAAVDVLKAYRQQSERLRDEELQKALRLLANGGNAEDVLGQLARGLTNKLLHAPSVQLKKLSAEG RLDALAMAQELFALEGSPDSFSDKKPQ
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=419, Percent_Identity=51.5513126491647, Blast_Score=405, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 46687; Mature: 46556
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLALGINHKTASVDVRERVAFTPEQLVEALQQLCRLTDSREAAILSTCNRSELYIEQD CEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEHH QLSADIVLRWLADYHHLSLDELRASAYVHEDDAAVRHMMRVASGLDSLVLGEPQILGQMK HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHH SAYAVAREAGTIGPLLGRLFQATFNAAKQVRTDTAIGENPVSVAFAAVSLAKQIFSDLQR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SQALLIGAGETITLVARHLHELGVKRIVVANRTLERASLLAEQFGAHAVLLSDIPAELVR CCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHH SDIVISSTASQLPILGKGAVESALKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDD HHHEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHH LHEVVAENLKSRQGAAQAAEEMVSVGADDFMVRLRELAAVDVLKAYRQQSERLRDEELQK HHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRLLANGGNAEDVLGQLARGLTNKLLHAPSVQLKKLSAEGRLDALAMAQELFALEGSPD HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCC SFSDKKPQ CCCCCCCC >Mature Secondary Structure AFLALGINHKTASVDVRERVAFTPEQLVEALQQLCRLTDSREAAILSTCNRSELYIEQD EEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEHH QLSADIVLRWLADYHHLSLDELRASAYVHEDDAAVRHMMRVASGLDSLVLGEPQILGQMK HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHH SAYAVAREAGTIGPLLGRLFQATFNAAKQVRTDTAIGENPVSVAFAAVSLAKQIFSDLQR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SQALLIGAGETITLVARHLHELGVKRIVVANRTLERASLLAEQFGAHAVLLSDIPAELVR CCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHH SDIVISSTASQLPILGKGAVESALKLRKHKPIFMVDIAVPRDIEPEVGELDDVYLYSVDD HHHEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHH LHEVVAENLKSRQGAAQAAEEMVSVGADDFMVRLRELAAVDVLKAYRQQSERLRDEELQK HHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRLLANGGNAEDVLGQLARGLTNKLLHAPSVQLKKLSAEGRLDALAMAQELFALEGSPD HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCC SFSDKKPQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA