| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460984
Identifier: 77460984
GI number: 77460984
Start: 5368050
End: 5369156
Strand: Reverse
Name: 77460984
Synonym: Pfl01_4763
Alternate gene names: NA
Gene position: 5369156-5368050 (Counterclockwise)
Preceding gene: 77460986
Following gene: 77460978
Centisome position: 83.39
GC content: 61.25
Gene sequence:
>1107_bases ATGCACAACGAGTTTCCGACCCAGCCCAGCTATCGCGAACAGCGCGAGCGCTTTCTTGCTGCCGCGAAGGTGGCGGGTGC CACGCTCTCTTCGTACGCGCATCCGCTCAATGGGCCGTTTGGCGAGTCTTTGAGTACCGATGTCGCGGTGCTGGGGGATC CAGCGGCCAAACGGCGCCTGGTGGCGCTCAGCGGCACCCACGGTGTTGAAGGTTATTACGGTTCGGAGTGCCAGATCGAC TGGCTGAAGCATTTCACGCCGGAGTCGCTGCCGAAGGATGTCGCGGTCGTGATGATCCACTTGATCAACCCGTGGGGCAC GGCGTGGCTGCGGCGGGTCAATGAAGACAATATTGACCTCAACCGCAATCACCTGGATTTCAACCGACCGCTTCCGGACA ACCGCGCTTACGCGGCGCTTCATGAAATCTACGCCTGCACCGATTTGAACGGCCCTCAGCGGCAACAGGCTGATGCCTTG CTGGATGCGCAAATTGCCGAGCACGGCTGGCCGGCGGTGATGTCGATTGTCGAGAGCGGTCAGCACAGTCATCCCGACGG ATTGTTCTTCGGCGGGCTCGCGCCGAGTTGGTCGAATCGCACGTTGCATTCCATCATCGAGAATCATCTGGCCGGCGCTG AAACCGTGATGTGTTTCGACCTGCACACCGGCGCCGGTGAGTACGGGCATCCGATGCTGCTGACGATTACCCAGGCGCCG TATCCGGCACTGGCCCAAGCGCAATCGATTTACGGCCCGTGGCTTTACACGCTACACACCGGCGCCGAAACCTTGAGTGA TACCGGCGTTGCAGCAACCGCCACCGGGTACACCTCGCAGGCACTGCTCAATGCGCTGCCGAATGTGCAGCTGATGCCGT TCGTGATCGAGTGCGGCACTTATCCGGGGCCGGACGTGCATCGTTACCTGCGCGACGATCACTGGCTGCATCTGCATGGC GATCCGCTGGATGCGACGGGGCGGGCGATCAAGTTGAATCTGCTGGAGCAGTTTTATCCGGCGGATCCGGACTGGCGGGC GATTGTCGGTTTGCGGACGCGGCAGATTTGGGCGAAGGGGCTCTTGGCCTTGGGGGAAGAGGTATAA
Upstream 100 bases:
>100_bases TACGACGCAAACCGCAGGCATCTTCGTCCTTCATGCCTTGGCGGATTTTCTGTAGGGTCATGGGCAAACGTGAAGCCAGA ACAATCAACAAGAGGCCGCC
Downstream 100 bases:
>100_bases ACAAACGGCTTGCCTTTCGGTAAGCCGTTTTAGCTGTTTGGAGTATGGATTCCAGATGTTTACTGCTTGAAACCAGGTAG GCCGTTGGCAGCACGCCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MHNEFPTQPSYREQRERFLAAAKVAGATLSSYAHPLNGPFGESLSTDVAVLGDPAAKRRLVALSGTHGVEGYYGSECQID WLKHFTPESLPKDVAVVMIHLINPWGTAWLRRVNEDNIDLNRNHLDFNRPLPDNRAYAALHEIYACTDLNGPQRQQADAL LDAQIAEHGWPAVMSIVESGQHSHPDGLFFGGLAPSWSNRTLHSIIENHLAGAETVMCFDLHTGAGEYGHPMLLTITQAP YPALAQAQSIYGPWLYTLHTGAETLSDTGVAATATGYTSQALLNALPNVQLMPFVIECGTYPGPDVHRYLRDDHWLHLHG DPLDATGRAIKLNLLEQFYPADPDWRAIVGLRTRQIWAKGLLALGEEV
Sequences:
>Translated_368_residues MHNEFPTQPSYREQRERFLAAAKVAGATLSSYAHPLNGPFGESLSTDVAVLGDPAAKRRLVALSGTHGVEGYYGSECQID WLKHFTPESLPKDVAVVMIHLINPWGTAWLRRVNEDNIDLNRNHLDFNRPLPDNRAYAALHEIYACTDLNGPQRQQADAL LDAQIAEHGWPAVMSIVESGQHSHPDGLFFGGLAPSWSNRTLHSIIENHLAGAETVMCFDLHTGAGEYGHPMLLTITQAP YPALAQAQSIYGPWLYTLHTGAETLSDTGVAATATGYTSQALLNALPNVQLMPFVIECGTYPGPDVHRYLRDDHWLHLHG DPLDATGRAIKLNLLEQFYPADPDWRAIVGLRTRQIWAKGLLALGEEV >Mature_368_residues MHNEFPTQPSYREQRERFLAAAKVAGATLSSYAHPLNGPFGESLSTDVAVLGDPAAKRRLVALSGTHGVEGYYGSECQID WLKHFTPESLPKDVAVVMIHLINPWGTAWLRRVNEDNIDLNRNHLDFNRPLPDNRAYAALHEIYACTDLNGPQRQQADAL LDAQIAEHGWPAVMSIVESGQHSHPDGLFFGGLAPSWSNRTLHSIIENHLAGAETVMCFDLHTGAGEYGHPMLLTITQAP YPALAQAQSIYGPWLYTLHTGAETLSDTGVAATATGYTSQALLNALPNVQLMPFVIECGTYPGPDVHRYLRDDHWLHLHG DPLDATGRAIKLNLLEQFYPADPDWRAIVGLRTRQIWAKGLLALGEEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40559; Mature: 40559
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNEFPTQPSYREQRERFLAAAKVAGATLSSYAHPLNGPFGESLSTDVAVLGDPAAKRRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHCEE VALSGTHGVEGYYGSECQIDWLKHFTPESLPKDVAVVMIHLINPWGTAWLRRVNEDNIDL EEEECCCCCCCCCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCC NRNHLDFNRPLPDNRAYAALHEIYACTDLNGPQRQQADALLDAQIAEHGWPAVMSIVESG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC QHSHPDGLFFGGLAPSWSNRTLHSIIENHLAGAETVMCFDLHTGAGEYGHPMLLTITQAP CCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCC YPALAQAQSIYGPWLYTLHTGAETLSDTGVAATATGYTSQALLNALPNVQLMPFVIECGT CHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEECCCHHHHHHHHCCCCEEEEEEEECCC YPGPDVHRYLRDDHWLHLHGDPLDATGRAIKLNLLEQFYPADPDWRAIVGLRTRQIWAKG CCCHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEHHHHCCCCCCCEEEECHHHHHHHHHH LLALGEEV HHHHCCCC >Mature Secondary Structure MHNEFPTQPSYREQRERFLAAAKVAGATLSSYAHPLNGPFGESLSTDVAVLGDPAAKRRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHCEE VALSGTHGVEGYYGSECQIDWLKHFTPESLPKDVAVVMIHLINPWGTAWLRRVNEDNIDL EEEECCCCCCCCCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCC NRNHLDFNRPLPDNRAYAALHEIYACTDLNGPQRQQADALLDAQIAEHGWPAVMSIVESG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC QHSHPDGLFFGGLAPSWSNRTLHSIIENHLAGAETVMCFDLHTGAGEYGHPMLLTITQAP CCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCC YPALAQAQSIYGPWLYTLHTGAETLSDTGVAATATGYTSQALLNALPNVQLMPFVIECGT CHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEECCCHHHHHHHHCCCCEEEEEEEECCC YPGPDVHRYLRDDHWLHLHGDPLDATGRAIKLNLLEQFYPADPDWRAIVGLRTRQIWAKG CCCHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEHHHHCCCCCCCEEEECHHHHHHHHHH LLALGEEV HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA