| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460960
Identifier: 77460960
GI number: 77460960
Start: 5343937
End: 5345184
Strand: Direct
Name: 77460960
Synonym: Pfl01_4739
Alternate gene names: NA
Gene position: 5343937-5345184 (Clockwise)
Preceding gene: 77460959
Following gene: 77460961
Centisome position: 83.0
GC content: 60.9
Gene sequence:
>1248_bases ATGAAAATCGCCATTATCGGCAGTGGCATCGCAGGATTGACCTGCGCATACCTGCTTGCTCGCCGACATGACATCACCGT GTTCGAAGCCGACGCCCGGGTCGGCGGTCATACGCACACGGTGCCGGTCACCGTGGACGGGCGCGAGTATGCGGTGGACA CCGGGTTCATTGTGTTCAACGACTGGACGTATCCGAACTTTATTCGTTTGCTCGGCCAGTTGGGCGTGGCCTTCAAGCCC ACCGAGATGAGTTTTTCGGTCAACGATCCGGACACTGGCCTGGAATACAACGGCAACAACCTCAACAGCCTGTTCGCCCA ACGCAGCAATCTGCTGTCCCCCGGATTCTGGGGCATGTTGCGCGACATCCTGCGATTCAATAAAGAAGCCCGGCGCGACC TTGCCGAACAGCGGATCACCGCGGACACCACACTCGACGATTACCTCAAGGCCGGCGCTTACGGCGAGCGCTTCATCCTG CATTACATCGTGCCGATGGGCGCGGCGATCTGGTCGATGCCGATGGCCGAAATGCTCAATTTTCCGTTGCAGTTCTTCGT GCGTTTTTTTGAGAACCACGGGTTGCTGTCGGTCAGCAACCGTCCGCAATGGCAGGTCATCGAGGGGGGTTCCAGCGCTT ACATTGCGCCGTTGACCGCATCGTTCAAGGAGCGTATCCGCCTGAGTTGCCCGGTGGGCCGGATCGATCGCGATGCGCAC GGCGTGGTTATCCACAGCCCTGCCGGCATCGAACGTTTCGACAAAGTGGTGCTGGCCTGCCACAGCGACCAGGCCCTGCG ACTGCTGGGAAGTCCTGACGATAAAGAAAGGGAAATCCTCGGCGCCCTGCCCTACGCCGACAACGAAGTGCTGCTGCACA CCGACACCCGTCTGCTGCCCACGCGCAAGCGGGCCTGGGCCAGCTGGAACTATCGCCTCGGCGGAGCCGGTCATACCCGG GCGGCCGTGACCTACGACATGAACATTCTGCAAGGCATCCAGAGCGACACCACGTTCTGCGTCAGCCTCAATCAGAGCGC TGGCATCACACCATCCAAAGTGCTGGCGCGCTTTACCTATGCCCACCCGCAATTCAGCCTCGCGGCCGTGGCGGCACAGC AGCGCTGGGCTGAAATCGACGGCGCGCAACACACGCATTATTGCGGCGCCTATTGGGCCAACGGTTTTCATGAGGACGGC GTGGTCAGCGCCCTGCGCGTGGCCGCAGCCTTCGGAGAAAGTCTGTGA
Upstream 100 bases:
>100_bases TCATCGCGGCCCTGTGGCCACTGTCGAAAATGCCCGCGCGGGTACAACTGGCGATCGGCAAGCGCATGGTGCGCAGCAAC CCGCCGCTCAAGGATGCAAC
Downstream 100 bases:
>100_bases ACAGCGCGCTCTACAGTGGCTGGATTGCCCATCGGCGATTTGCCCCACGCCGTCATGAGTTTCGTTACCGGATCGGCATG CTGTATCTGGATCTGGCTGA
Product: amine oxidase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKIAIIGSGIAGLTCAYLLARRHDITVFEADARVGGHTHTVPVTVDGREYAVDTGFIVFNDWTYPNFIRLLGQLGVAFKP TEMSFSVNDPDTGLEYNGNNLNSLFAQRSNLLSPGFWGMLRDILRFNKEARRDLAEQRITADTTLDDYLKAGAYGERFIL HYIVPMGAAIWSMPMAEMLNFPLQFFVRFFENHGLLSVSNRPQWQVIEGGSSAYIAPLTASFKERIRLSCPVGRIDRDAH GVVIHSPAGIERFDKVVLACHSDQALRLLGSPDDKEREILGALPYADNEVLLHTDTRLLPTRKRAWASWNYRLGGAGHTR AAVTYDMNILQGIQSDTTFCVSLNQSAGITPSKVLARFTYAHPQFSLAAVAAQQRWAEIDGAQHTHYCGAYWANGFHEDG VVSALRVAAAFGESL
Sequences:
>Translated_415_residues MKIAIIGSGIAGLTCAYLLARRHDITVFEADARVGGHTHTVPVTVDGREYAVDTGFIVFNDWTYPNFIRLLGQLGVAFKP TEMSFSVNDPDTGLEYNGNNLNSLFAQRSNLLSPGFWGMLRDILRFNKEARRDLAEQRITADTTLDDYLKAGAYGERFIL HYIVPMGAAIWSMPMAEMLNFPLQFFVRFFENHGLLSVSNRPQWQVIEGGSSAYIAPLTASFKERIRLSCPVGRIDRDAH GVVIHSPAGIERFDKVVLACHSDQALRLLGSPDDKEREILGALPYADNEVLLHTDTRLLPTRKRAWASWNYRLGGAGHTR AAVTYDMNILQGIQSDTTFCVSLNQSAGITPSKVLARFTYAHPQFSLAAVAAQQRWAEIDGAQHTHYCGAYWANGFHEDG VVSALRVAAAFGESL >Mature_415_residues MKIAIIGSGIAGLTCAYLLARRHDITVFEADARVGGHTHTVPVTVDGREYAVDTGFIVFNDWTYPNFIRLLGQLGVAFKP TEMSFSVNDPDTGLEYNGNNLNSLFAQRSNLLSPGFWGMLRDILRFNKEARRDLAEQRITADTTLDDYLKAGAYGERFIL HYIVPMGAAIWSMPMAEMLNFPLQFFVRFFENHGLLSVSNRPQWQVIEGGSSAYIAPLTASFKERIRLSCPVGRIDRDAH GVVIHSPAGIERFDKVVLACHSDQALRLLGSPDDKEREILGALPYADNEVLLHTDTRLLPTRKRAWASWNYRLGGAGHTR AAVTYDMNILQGIQSDTTFCVSLNQSAGITPSKVLARFTYAHPQFSLAAVAAQQRWAEIDGAQHTHYCGAYWANGFHEDG VVSALRVAAAFGESL
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46001; Mature: 46001
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIIGSGIAGLTCAYLLARRHDITVFEADARVGGHTHTVPVTVDGREYAVDTGFIVFN CEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEECCCEEEEECCEEEEE DWTYPNFIRLLGQLGVAFKPTEMSFSVNDPDTGLEYNGNNLNSLFAQRSNLLSPGFWGML CCCCHHHHHHHHHCCCEECCCCEEEECCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHH RDILRFNKEARRDLAEQRITADTTLDDYLKAGAYGERFILHYIVPMGAAIWSMPMAEMLN HHHHHHCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHC FPLQFFVRFFENHGLLSVSNRPQWQVIEGGSSAYIAPLTASFKERIRLSCPVGRIDRDAH CHHHHHHHHHHCCCEEEECCCCCEEEEECCCCEEEEEEHHHHHHCEEEECCCCCCCCCCC GVVIHSPAGIERFDKVVLACHSDQALRLLGSPDDKEREILGALPYADNEVLLHTDTRLLP EEEEECCCCHHHHHHEEEEECCCCCEEECCCCCCHHHHHHCCCCCCCCEEEEEECCCCCC TRKRAWASWNYRLGGAGHTRAAVTYDMNILQGIQSDTTFCVSLNQSAGITPSKVLARFTY CHHHHHCCCCEEECCCCCCCEEEEECHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHC AHPQFSLAAVAAQQRWAEIDGAQHTHYCGAYWANGFHEDGVVSALRVAAAFGESL CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIAIIGSGIAGLTCAYLLARRHDITVFEADARVGGHTHTVPVTVDGREYAVDTGFIVFN CEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEECCCEEEEECCEEEEE DWTYPNFIRLLGQLGVAFKPTEMSFSVNDPDTGLEYNGNNLNSLFAQRSNLLSPGFWGML CCCCHHHHHHHHHCCCEECCCCEEEECCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHH RDILRFNKEARRDLAEQRITADTTLDDYLKAGAYGERFILHYIVPMGAAIWSMPMAEMLN HHHHHHCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHC FPLQFFVRFFENHGLLSVSNRPQWQVIEGGSSAYIAPLTASFKERIRLSCPVGRIDRDAH CHHHHHHHHHHCCCEEEECCCCCEEEEECCCCEEEEEEHHHHHHCEEEECCCCCCCCCCC GVVIHSPAGIERFDKVVLACHSDQALRLLGSPDDKEREILGALPYADNEVLLHTDTRLLP EEEEECCCCHHHHHHEEEEECCCCCEEECCCCCCHHHHHHCCCCCCCCEEEEEECCCCCC TRKRAWASWNYRLGGAGHTRAAVTYDMNILQGIQSDTTFCVSLNQSAGITPSKVLARFTY CHHHHHCCCCEEECCCCCCCEEEEECHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHC AHPQFSLAAVAAQQRWAEIDGAQHTHYCGAYWANGFHEDGVVSALRVAAAFGESL CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA