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The map label for this gene is ydfG [C]

Identifier: 77460959

GI number: 77460959

Start: 5343158

End: 5343940

Strand: Direct

Name: ydfG [C]

Synonym: Pfl01_4738

Alternate gene names: 77460959

Gene position: 5343158-5343940 (Clockwise)

Preceding gene: 77460958

Following gene: 77460960

Centisome position: 82.99

GC content: 62.07

Gene sequence:

>783_bases
ATGAGTCGTACAGCTCCACGGCGTTATTGGCTGACCGGTGCCAGCAGTGGCATCGGTGCAGCATTGGCAGAAGAAATCCT
CAAGACCGGTGCACATCTGGCGGTCAGTTCCCGTCAGGTCGCGCCGCTCAAAGTGCTGTCGCAACGTTATCCGGGACAGG
TACTGCTGGTGCCCGGCGATCTGACCAACAGTCAGACCGTGCGCGAAATCGGCGAACAGATCGCAGCGGACTGGGGCTCG
CTGGACTCGGTGATCCTCAACGCCGGCACCTGCGAATACGTCGACGCCCGTCAATTCGACGCGTCGATCGTCGAACACGT
AGTGCGCACCAACCTGCTCGCCAGCAGCTATTGCATCGAAGCCGCCCTGCCGTTGCTGCGCAAAGGTACGGCACCGCATC
TGGTGGGGATGGCCAGCTCGGTGACCTATGTGCCGTTGCCCCGCGCCGAAGCCTATGGCGCGTCGAAGGCCGGGCTGCGC
TATCTGTTCGAATCCCTGCGCATTGACCTGGCGGCCGAAGGCATTGAAGTCACGGTAATCAGTCCAGGCTTCGTCGACAC
GCCCCTGACCGCCAAAAATGACTTCCCGATGCCGCTCAGTTGGCCTGTGGATAAAGCCGCGCGGCATATCTTCGCCAAGC
TGAAGGACCGGCCGCTTGAGATCGCTTTCCCGGCGCTGTTCATCGCGGCCCTGTGGCCACTGTCGAAAATGCCCGCGCGG
GTACAACTGGCGATCGGCAAGCGCATGGTGCGCAGCAACCCGCCGCTCAAGGATGCAACATGA

Upstream 100 bases:

>100_bases
AGGTTTACCGTCATCGGGATTACTTCGATGCCGGAGCACTGCTTTATGAACATTTACCCATATTGGGTCGGGTGATCGCT
TGGCTGAAAAGGAGATTGGG

Downstream 100 bases:

>100_bases
AAATCGCCATTATCGGCAGTGGCATCGCAGGATTGACCTGCGCATACCTGCTTGCTCGCCGACATGACATCACCGTGTTC
GAAGCCGACGCCCGGGTCGG

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSRTAPRRYWLTGASSGIGAALAEEILKTGAHLAVSSRQVAPLKVLSQRYPGQVLLVPGDLTNSQTVREIGEQIAADWGS
LDSVILNAGTCEYVDARQFDASIVEHVVRTNLLASSYCIEAALPLLRKGTAPHLVGMASSVTYVPLPRAEAYGASKAGLR
YLFESLRIDLAAEGIEVTVISPGFVDTPLTAKNDFPMPLSWPVDKAARHIFAKLKDRPLEIAFPALFIAALWPLSKMPAR
VQLAIGKRMVRSNPPLKDAT

Sequences:

>Translated_260_residues
MSRTAPRRYWLTGASSGIGAALAEEILKTGAHLAVSSRQVAPLKVLSQRYPGQVLLVPGDLTNSQTVREIGEQIAADWGS
LDSVILNAGTCEYVDARQFDASIVEHVVRTNLLASSYCIEAALPLLRKGTAPHLVGMASSVTYVPLPRAEAYGASKAGLR
YLFESLRIDLAAEGIEVTVISPGFVDTPLTAKNDFPMPLSWPVDKAARHIFAKLKDRPLEIAFPALFIAALWPLSKMPAR
VQLAIGKRMVRSNPPLKDAT
>Mature_259_residues
SRTAPRRYWLTGASSGIGAALAEEILKTGAHLAVSSRQVAPLKVLSQRYPGQVLLVPGDLTNSQTVREIGEQIAADWGSL
DSVILNAGTCEYVDARQFDASIVEHVVRTNLLASSYCIEAALPLLRKGTAPHLVGMASSVTYVPLPRAEAYGASKAGLRY
LFESLRIDLAAEGIEVTVISPGFVDTPLTAKNDFPMPLSWPVDKAARHIFAKLKDRPLEIAFPALFIAALWPLSKMPARV
QLAIGKRMVRSNPPLKDAT

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7706318, Length=188, Percent_Identity=28.1914893617021, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI20149619, Length=189, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI109715829, Length=256, Percent_Identity=26.5625, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI226371731, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787820, Length=176, Percent_Identity=25.5681818181818, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786812, Length=236, Percent_Identity=25, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789378, Length=193, Percent_Identity=27.4611398963731, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787335, Length=183, Percent_Identity=28.4153005464481, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322226, Length=256, Percent_Identity=27.734375, Blast_Score=72, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6323882, Length=198, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI23397609, Length=185, Percent_Identity=34.5945945945946, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24644339, Length=197, Percent_Identity=33.502538071066, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI116007236, Length=210, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21358495, Length=189, Percent_Identity=27.5132275132275, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24641232, Length=203, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571387, Length=205, Percent_Identity=31.219512195122, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21355319, Length=198, Percent_Identity=26.7676767676768, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24649181, Length=184, Percent_Identity=25, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28071; Mature: 27940

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTAPRRYWLTGASSGIGAALAEEILKTGAHLAVSSRQVAPLKVLSQRYPGQVLLVPGD
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCEEEEECCC
LTNSQTVREIGEQIAADWGSLDSVILNAGTCEYVDARQFDASIVEHVVRTNLLASSYCIE
CCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AALPLLRKGTAPHLVGMASSVTYVPLPRAEAYGASKAGLRYLFESLRIDLAAEGIEVTVI
HHHHHHHCCCCCHHHHHCCCCEEEECCCHHHCCCCHHHHHHHHHHHHHHEECCCEEEEEE
SPGFVDTPLTAKNDFPMPLSWPVDKAARHIFAKLKDRPLEIAFPALFIAALWPLSKMPAR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
VQLAIGKRMVRSNPPLKDAT
EEHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SRTAPRRYWLTGASSGIGAALAEEILKTGAHLAVSSRQVAPLKVLSQRYPGQVLLVPGD
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCEEEEECCC
LTNSQTVREIGEQIAADWGSLDSVILNAGTCEYVDARQFDASIVEHVVRTNLLASSYCIE
CCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AALPLLRKGTAPHLVGMASSVTYVPLPRAEAYGASKAGLRYLFESLRIDLAAEGIEVTVI
HHHHHHHCCCCCHHHHHCCCCEEEECCCHHHCCCCHHHHHHHHHHHHHHEECCCEEEEEE
SPGFVDTPLTAKNDFPMPLSWPVDKAARHIFAKLKDRPLEIAFPALFIAALWPLSKMPAR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
VQLAIGKRMVRSNPPLKDAT
EEHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]