| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460961
Identifier: 77460961
GI number: 77460961
Start: 5345181
End: 5345996
Strand: Direct
Name: 77460961
Synonym: Pfl01_4740
Alternate gene names: NA
Gene position: 5345181-5345996 (Clockwise)
Preceding gene: 77460960
Following gene: 77460962
Centisome position: 83.02
GC content: 62.25
Gene sequence:
>816_bases GTGAACAGCGCGCTCTACAGTGGCTGGATTGCCCATCGGCGATTTGCCCCACGCCGTCATGAGTTTCGTTACCGGATCGG CATGCTGTATCTGGATCTGGCTGAACAGGAAGCGGTGCTGGGCCTGTCCCGACTGGCGGGCACCAGCCGCTTTGCGCCGT TTTCATTTCGCGAAACCGATTACCTGAAAACCTTCACCGACCGGGGCGTGCGCCTGAGCGATGCGGTGCGCCAGTTGGTC GGCGAAGCCCTGGGCCATGCGCCGCAAGGTTCGATCTGCCTGCTGACCCAACCGCGCAGCTGGGGCCTGTCGTTCAACCC GGTGAGCTTTTTCTATTGCCACGAGGCCGACGGCCAACTGGCGGCGATTCTCTGCGAGGTCCGCAACACGCCATGGCGCG AGCGTTATCACTACGTGCTGCCGGCTCGAACGCCGACTCATCTGCGGGACTTTCATCAGCACTTTGCCGTGACCAAGGCC TTTCACGTGTCGCCGTTCCTGCCGCCGGACCTGGAATACCGCATGAGCTTCAGCCCGGCCGCGCAGACTTTGGGCGTACA CATGGCCGACTGGCAGGGTGAGCAAAAACTGTTCGACGCCACCCTCGACCTGCAACGCGAACCCCTTGATCGAAGCCACT TGCACCGACACCTGTGGCGCTTTCCCTGGATGACTGCCAAGACCGCGCTGGCGATCTATTGGCAGGCGCTGCGCCTGTTG CTCAAGCGCACCCCGGTGTATGACCACCAACGCGCCGACGACCGTTTTCGAACCGCCACTGTACCGACCGAGGAACGCCA CCATGAAATCCACTAG
Upstream 100 bases:
>100_bases CGCAACACACGCATTATTGCGGCGCCTATTGGGCCAACGGTTTTCATGAGGACGGCGTGGTCAGCGCCCTGCGCGTGGCC GCAGCCTTCGGAGAAAGTCT
Downstream 100 bases:
>100_bases CGTCTCGGCCAAAGCCAGCCTGTTCAGCCCTCACGGCCTGAGCGGTTCGCTGCTGCGCCGGGGAGTACTGCGCCAGCTGG AGCAGCTCAAGCAGGGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNSALYSGWIAHRRFAPRRHEFRYRIGMLYLDLAEQEAVLGLSRLAGTSRFAPFSFRETDYLKTFTDRGVRLSDAVRQLV GEALGHAPQGSICLLTQPRSWGLSFNPVSFFYCHEADGQLAAILCEVRNTPWRERYHYVLPARTPTHLRDFHQHFAVTKA FHVSPFLPPDLEYRMSFSPAAQTLGVHMADWQGEQKLFDATLDLQREPLDRSHLHRHLWRFPWMTAKTALAIYWQALRLL LKRTPVYDHQRADDRFRTATVPTEERHHEIH
Sequences:
>Translated_271_residues MNSALYSGWIAHRRFAPRRHEFRYRIGMLYLDLAEQEAVLGLSRLAGTSRFAPFSFRETDYLKTFTDRGVRLSDAVRQLV GEALGHAPQGSICLLTQPRSWGLSFNPVSFFYCHEADGQLAAILCEVRNTPWRERYHYVLPARTPTHLRDFHQHFAVTKA FHVSPFLPPDLEYRMSFSPAAQTLGVHMADWQGEQKLFDATLDLQREPLDRSHLHRHLWRFPWMTAKTALAIYWQALRLL LKRTPVYDHQRADDRFRTATVPTEERHHEIH >Mature_271_residues MNSALYSGWIAHRRFAPRRHEFRYRIGMLYLDLAEQEAVLGLSRLAGTSRFAPFSFRETDYLKTFTDRGVRLSDAVRQLV GEALGHAPQGSICLLTQPRSWGLSFNPVSFFYCHEADGQLAAILCEVRNTPWRERYHYVLPARTPTHLRDFHQHFAVTKA FHVSPFLPPDLEYRMSFSPAAQTLGVHMADWQGEQKLFDATLDLQREPLDRSHLHRHLWRFPWMTAKTALAIYWQALRLL LKRTPVYDHQRADDRFRTATVPTEERHHEIH
Specific function: Unknown
COG id: COG3496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31736; Mature: 31736
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSALYSGWIAHRRFAPRRHEFRYRIGMLYLDLAEQEAVLGLSRLAGTSRFAPFSFRETD CCCCHHHHHHHHHHCCCCHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHH YLKTFTDRGVRLSDAVRQLVGEALGHAPQGSICLLTQPRSWGLSFNPVSFFYCHEADGQL HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCH AAILCEVRNTPWRERYHYVLPARTPTHLRDFHQHFAVTKAFHVSPFLPPDLEYRMSFSPA HHHHHHHCCCCCHHCEEEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCHH AQTLGVHMADWQGEQKLFDATLDLQREPLDRSHLHRHLWRFPWMTAKTALAIYWQALRLL HHHHCCEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LKRTPVYDHQRADDRFRTATVPTEERHHEIH HHHCCCCCCCCCCCCEEECCCCCHHHCCCCC >Mature Secondary Structure MNSALYSGWIAHRRFAPRRHEFRYRIGMLYLDLAEQEAVLGLSRLAGTSRFAPFSFRETD CCCCHHHHHHHHHHCCCCHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHH YLKTFTDRGVRLSDAVRQLVGEALGHAPQGSICLLTQPRSWGLSFNPVSFFYCHEADGQL HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCH AAILCEVRNTPWRERYHYVLPARTPTHLRDFHQHFAVTKAFHVSPFLPPDLEYRMSFSPA HHHHHHHCCCCCHHCEEEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCHH AQTLGVHMADWQGEQKLFDATLDLQREPLDRSHLHRHLWRFPWMTAKTALAIYWQALRLL HHHHCCEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LKRTPVYDHQRADDRFRTATVPTEERHHEIH HHHCCCCCCCCCCCCEEECCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA