| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460854
Identifier: 77460854
GI number: 77460854
Start: 5232135
End: 5234054
Strand: Direct
Name: 77460854
Synonym: Pfl01_4633
Alternate gene names: NA
Gene position: 5232135-5234054 (Clockwise)
Preceding gene: 77460853
Following gene: 77460855
Centisome position: 81.26
GC content: 61.56
Gene sequence:
>1920_bases ATGCCTCCGACACCTGATGACCTGAGCCCGTTGCCCGCTGTTCTGGCCGGGCCACTGCTGCGCCGAATGCAACCGACGCG CTTAGTGCTTTGGCTGGTGGGCAGCCGCGAACTGTCGTTGACCTTGCGCCTGCAAGGCGTAGGAGACATTTCACTGGATG CCGGGAAATGCACGGTCATTCCGGTAGGTACCCGGGCGTTTGTTCACCTCATCGATGTCCCCCTCGAAACCGCCCTGCCC TGCGACACCCGCATCGACTACGACCTGTTGATCGATGGCAAGCAGCCGATCGCCGACTGGGCGCCGCACCTGCTCTACGA CGACGCCACCGGCCCGAACTTCGTCCTGCGCTCGCGCATCGACCAGTTGCTCCACGGTTCCTGCCGCAAGCCCCATCATC CGGCCGCCGACGGTTTGCTCTGTGTTGACCGGTTGCTGGCCGCCGAAACCGATCCGCAGCAACGTCCCGCCCTGTTGATG ATGAGCGGTGATCAGGTTTACGCCGACGATGTGGCCTGTCCGATGTTGCGGGCGATTCATGCCTTGATCGAGCGCCTCGG TCTGTTCGGTGAACACCTCGAAGGCGCAGTAGTCAGCGACAGCGCGAAACTCTACGAACACCCGGCCAGTTACTACCATC GCGCGGATTTGCTGCCGGCACTGGAAAGCAACGAGACACTGCGCGAGCGTTTCTTCGGCGGTGCGCGCAAGCCGATTTTC ACCAGCAGCAGCGCCGACAATCACCTCGTGACGTTTGCCGAAGTCATGGCGATGTATTTGCTGGTGTGGTCGCCAACACC CTGGACACTGGTCAATCCGCAGCCACCGGCACTGACGCCTGAACGCCTCAAGCGCTATGCCCTTGAACAGACCCGCATCG ACGGGTTCAAGGCCGGCCTCGGCCAGGTGGCCCGGGCACTGGCGCATCTGCCGAGCCTGATGATCTTCGATGACCACGAC ATCACCGATGACTGGAACCTCTCCGCGCAATGGGAGGAAACGGCCTACGGCCACCCGTTCTCCAAACGCATCATCGGCAA CGCGCTGATCGCCTACATGCTGTGTCAGGGTTGGGGCAACAATCCGGATGCATTCAGCGCAGTGCTGGAGAAAACCCGCG GCCTGAGCGCCAACGGTGACGACCGCTACCTCGACGCTCCCGTGCAGGACGAATTGATTGAGGAATTGCTGCGCTTTCAG CAATGGCATTTCGTATTGCCGACCAGCCCGGCGCTGGTGGTGCTCGATACCCGCACCCGACGCTGGCGCAGCGAAATGGC ACTCAAGCAGCCGTCGGGCCTGCTGGACTGGGAAGCCTTGAGCGAACTGCAGCAGGAACTGCTCGACCATCCTTCGGCGA TCATCGTTTCGCCGGCACCGATCTTCGGCGTGAAGCTGATCGAAACCGTGCAGCGAGTATTCAGCTGGTGCGGTTATCCA CTGCTGGTGGACGCAGAAAACTGGATGGCCCATCGCGGCGCCGCCCAGGTGATCCTGAACATTTTCCGACACTCGCGTAC ACCGGGCAGCTACGTGGTGCTGTCAGGCGACGTGCATTATTCCTTCGTCTACGAAGTCTTGATCCGACACCGCAAGGCCG GCCCGCGCATCTGGCAAATCACCAGCAGCGGCATCAAGAACGAATTTCCCCCGACCCTGTTGGAATGGTTCGACCGTCTC AACCGCTGGCTCTACTCACCACGCTCGCCGCTCAACTGGCTGACCAAACGCCGCCGCATGCGCATCGTCCCGTACGTCCC GGAACACGCAGAAGCGGGTGAGCGACTGTGGAATTCGGCGGGGATCGGCCAGGTATTTTTCAATCATCAGGGACAGCCGA GCGACATCATCCAGCACAACGCGAACGGCGCACCGAAGACCCGGATGCTGGCGCCGGATTTGTCGGACTACCCTGATTAG
Upstream 100 bases:
>100_bases CGTTGAAGCTGGAAAAAACGGGCTCTTAAGCCTGGTTTAAGGGTTCGAGGCGCCGGCTGCGCTATCATCGCCGGCCTGTG CGCCTTGAGCTTTTCCCCCG
Downstream 100 bases:
>100_bases AAAAATCTCACGTAGAGAGTGAGAGGGATGGCAGGCGCGTCGGAATCAGCTTACAAAAGACCCAGAAACGTCTCGACGAG ACTTCGGTGATACTCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MPPTPDDLSPLPAVLAGPLLRRMQPTRLVLWLVGSRELSLTLRLQGVGDISLDAGKCTVIPVGTRAFVHLIDVPLETALP CDTRIDYDLLIDGKQPIADWAPHLLYDDATGPNFVLRSRIDQLLHGSCRKPHHPAADGLLCVDRLLAAETDPQQRPALLM MSGDQVYADDVACPMLRAIHALIERLGLFGEHLEGAVVSDSAKLYEHPASYYHRADLLPALESNETLRERFFGGARKPIF TSSSADNHLVTFAEVMAMYLLVWSPTPWTLVNPQPPALTPERLKRYALEQTRIDGFKAGLGQVARALAHLPSLMIFDDHD ITDDWNLSAQWEETAYGHPFSKRIIGNALIAYMLCQGWGNNPDAFSAVLEKTRGLSANGDDRYLDAPVQDELIEELLRFQ QWHFVLPTSPALVVLDTRTRRWRSEMALKQPSGLLDWEALSELQQELLDHPSAIIVSPAPIFGVKLIETVQRVFSWCGYP LLVDAENWMAHRGAAQVILNIFRHSRTPGSYVVLSGDVHYSFVYEVLIRHRKAGPRIWQITSSGIKNEFPPTLLEWFDRL NRWLYSPRSPLNWLTKRRRMRIVPYVPEHAEAGERLWNSAGIGQVFFNHQGQPSDIIQHNANGAPKTRMLAPDLSDYPD
Sequences:
>Translated_639_residues MPPTPDDLSPLPAVLAGPLLRRMQPTRLVLWLVGSRELSLTLRLQGVGDISLDAGKCTVIPVGTRAFVHLIDVPLETALP CDTRIDYDLLIDGKQPIADWAPHLLYDDATGPNFVLRSRIDQLLHGSCRKPHHPAADGLLCVDRLLAAETDPQQRPALLM MSGDQVYADDVACPMLRAIHALIERLGLFGEHLEGAVVSDSAKLYEHPASYYHRADLLPALESNETLRERFFGGARKPIF TSSSADNHLVTFAEVMAMYLLVWSPTPWTLVNPQPPALTPERLKRYALEQTRIDGFKAGLGQVARALAHLPSLMIFDDHD ITDDWNLSAQWEETAYGHPFSKRIIGNALIAYMLCQGWGNNPDAFSAVLEKTRGLSANGDDRYLDAPVQDELIEELLRFQ QWHFVLPTSPALVVLDTRTRRWRSEMALKQPSGLLDWEALSELQQELLDHPSAIIVSPAPIFGVKLIETVQRVFSWCGYP LLVDAENWMAHRGAAQVILNIFRHSRTPGSYVVLSGDVHYSFVYEVLIRHRKAGPRIWQITSSGIKNEFPPTLLEWFDRL NRWLYSPRSPLNWLTKRRRMRIVPYVPEHAEAGERLWNSAGIGQVFFNHQGQPSDIIQHNANGAPKTRMLAPDLSDYPD >Mature_638_residues PPTPDDLSPLPAVLAGPLLRRMQPTRLVLWLVGSRELSLTLRLQGVGDISLDAGKCTVIPVGTRAFVHLIDVPLETALPC DTRIDYDLLIDGKQPIADWAPHLLYDDATGPNFVLRSRIDQLLHGSCRKPHHPAADGLLCVDRLLAAETDPQQRPALLMM SGDQVYADDVACPMLRAIHALIERLGLFGEHLEGAVVSDSAKLYEHPASYYHRADLLPALESNETLRERFFGGARKPIFT SSSADNHLVTFAEVMAMYLLVWSPTPWTLVNPQPPALTPERLKRYALEQTRIDGFKAGLGQVARALAHLPSLMIFDDHDI TDDWNLSAQWEETAYGHPFSKRIIGNALIAYMLCQGWGNNPDAFSAVLEKTRGLSANGDDRYLDAPVQDELIEELLRFQQ WHFVLPTSPALVVLDTRTRRWRSEMALKQPSGLLDWEALSELQQELLDHPSAIIVSPAPIFGVKLIETVQRVFSWCGYPL LVDAENWMAHRGAAQVILNIFRHSRTPGSYVVLSGDVHYSFVYEVLIRHRKAGPRIWQITSSGIKNEFPPTLLEWFDRLN RWLYSPRSPLNWLTKRRRMRIVPYVPEHAEAGERLWNSAGIGQVFFNHQGQPSDIIQHNANGAPKTRMLAPDLSDYPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71897; Mature: 71766
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTPDDLSPLPAVLAGPLLRRMQPTRLVLWLVGSRELSLTLRLQGVGDISLDAGKCTVI CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEECCCCEEECCCCEEEE PVGTRAFVHLIDVPLETALPCDTRIDYDLLIDGKQPIADWAPHLLYDDATGPNFVLRSRI ECCHHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCHHHHCCHHEECCCCCCHHHHHHHH DQLLHGSCRKPHHPAADGLLCVDRLLAAETDPQQRPALLMMSGDQVYADDVACPMLRAIH HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEEHHHHHHHHHHHHH ALIERLGLFGEHLEGAVVSDSAKLYEHPASYYHRADLLPALESNETLRERFFGGARKPIF HHHHHHHHHHHHHCCCEECCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEE TSSSADNHLVTFAEVMAMYLLVWSPTPWTLVNPQPPALTPERLKRYALEQTRIDGFKAGL ECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHH GQVARALAHLPSLMIFDDHDITDDWNLSAQWEETAYGHPFSKRIIGNALIAYMLCQGWGN HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC NPDAFSAVLEKTRGLSANGDDRYLDAPVQDELIEELLRFQQWHFVLPTSPALVVLDTRTR CHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHCEEEECCCCEEEEECCCHH RWRSEMALKQPSGLLDWEALSELQQELLDHPSAIIVSPAPIFGVKLIETVQRVFSWCGYP HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC LLVDAENWMAHRGAAQVILNIFRHSRTPGSYVVLSGDVHYSFVYEVLIRHRKAGPRIWQI EEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEE TSSGIKNEFPPTLLEWFDRLNRWLYSPRSPLNWLTKRRRMRIVPYVPEHAEAGERLWNSA ECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHCC GIGQVFFNHQGQPSDIIQHNANGAPKTRMLAPDLSDYPD CCCHHEECCCCCCHHHHHCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure PPTPDDLSPLPAVLAGPLLRRMQPTRLVLWLVGSRELSLTLRLQGVGDISLDAGKCTVI CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEECCCCEEECCCCEEEE PVGTRAFVHLIDVPLETALPCDTRIDYDLLIDGKQPIADWAPHLLYDDATGPNFVLRSRI ECCHHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCHHHHCCHHEECCCCCCHHHHHHHH DQLLHGSCRKPHHPAADGLLCVDRLLAAETDPQQRPALLMMSGDQVYADDVACPMLRAIH HHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEEHHHHHHHHHHHHH ALIERLGLFGEHLEGAVVSDSAKLYEHPASYYHRADLLPALESNETLRERFFGGARKPIF HHHHHHHHHHHHHCCCEECCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEE TSSSADNHLVTFAEVMAMYLLVWSPTPWTLVNPQPPALTPERLKRYALEQTRIDGFKAGL ECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHH GQVARALAHLPSLMIFDDHDITDDWNLSAQWEETAYGHPFSKRIIGNALIAYMLCQGWGN HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC NPDAFSAVLEKTRGLSANGDDRYLDAPVQDELIEELLRFQQWHFVLPTSPALVVLDTRTR CHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHCEEEECCCCEEEEECCCHH RWRSEMALKQPSGLLDWEALSELQQELLDHPSAIIVSPAPIFGVKLIETVQRVFSWCGYP HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC LLVDAENWMAHRGAAQVILNIFRHSRTPGSYVVLSGDVHYSFVYEVLIRHRKAGPRIWQI EEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEE TSSGIKNEFPPTLLEWFDRLNRWLYSPRSPLNWLTKRRRMRIVPYVPEHAEAGERLWNSA ECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHCC GIGQVFFNHQGQPSDIIQHNANGAPKTRMLAPDLSDYPD CCCHHEECCCCCCHHHHHCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA